Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

D5Q

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C01O02sing1.43Å1.40Å
O02C03sing1.36Å1.40Å
C03C04doub1.39Å1.39ÅAromatic
C03C10sing1.39Å1.38ÅAromatic
C04C05sing1.38Å1.39ÅAromatic
C05C06doub1.38Å1.38ÅAromatic
C06O07sing1.36Å1.41Å
C06C09sing1.40Å1.39ÅAromatic
O07C08sing1.43Å1.40Å
C09C10doub1.39Å1.38ÅAromatic
C09C11sing1.49Å1.53Å
C11C12doub1.37Å1.38ÅAromatic
C11C16sing1.41Å1.36ÅAromatic
C12N13sing1.35Å1.35ÅAromatic
N13C14sing1.47Å1.45Å
N13C15sing1.38Å1.35ÅAromatic
C15C16doub1.37Å1.37ÅAromatic
C15C17sing1.47Å1.54Å
C17O18doub1.22Å1.18Å
C17N19sing1.35Å1.46Å
N19C20sing1.39Å1.47Å
C20C21doub1.39Å1.39ÅAromatic
C20N25sing1.33Å1.32ÅAromatic
C21C22sing1.40Å1.39ÅAromatic
C22C23doub1.40Å1.39ÅAromatic
C22C26sing1.47Å1.54Å
C23C24sing1.38Å1.39ÅAromatic
C24N25doub1.32Å1.33ÅAromatic
C26C27doub1.38Å1.37ÅAromatic
C26N30sing1.38Å1.31ÅAromatic
C27N28sing1.35Å1.32ÅAromatic
C27C33sing1.48Å1.53Å
N28C29doub1.31Å1.34ÅAromatic
C29N30sing1.36Å1.34ÅAromatic
C29S31sing1.76Å1.82Å
S31C32sing1.81Å1.82Å
C33C34doub1.39Å1.38ÅAromatic
C33C39sing1.40Å1.39ÅAromatic
C34C35sing1.38Å1.39ÅAromatic
C35C36doub1.39Å1.39ÅAromatic
C36F37sing1.35Å1.37Å
C36C38sing1.39Å1.38ÅAromatic
C38C39doub1.38Å1.39ÅAromatic
C01H012sing1.09Å1.10Å
C01H011sing1.09Å1.10Å
C01H013sing1.09Å1.10Å
C04H041sing1.08Å1.08Å
C05H051sing1.08Å1.08Å
C08H081sing1.09Å1.10Å
C08H083sing1.09Å1.10Å
C08H082sing1.09Å1.10Å
C10H101sing1.08Å1.08Å
C12H121sing1.08Å1.08Å
C14H143sing1.09Å1.10Å
C14H141sing1.09Å1.10Å
C14H142sing1.09Å1.10Å
C16H161sing1.08Å1.08Å
N19H191sing0.97Å1.00Å
C21H211sing1.08Å1.08Å
C23H231sing1.08Å1.08Å
C24H241sing1.08Å1.08Å
N30H301sing0.97Å1.00Å
C32H323sing1.09Å1.10Å
C32H322sing1.09Å1.10Å
C32H321sing1.09Å1.10Å
C34H341sing1.08Å1.08Å
C35H351sing1.08Å1.08Å
C38H381sing1.08Å1.08Å
C39H391sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C01O02C03115.3°117.0°
O02C01H012109.5°109.5°
O02C01H011109.5°109.5°
O02C01H013109.5°109.5°
O02C03C04120.8°119.9°
O02C03C10119.8°120.0°
C04C03C10119.4°120.1°
C03C04C05120.1°120.2°
C03C04H041120.0°119.9°
C03C10C09120.2°119.9°
C03C10H101119.9°120.0°
C04C05C06120.6°120.1°
C05C04H041119.9°119.9°
C04C05H051119.7°120.0°
C05C06O07122.2°120.0°
C05C06C09118.7°119.9°
C06C05H051119.7°120.0°
O07C06C09119.1°120.1°
C06O07C08120.3°117.0°
C06C09C10120.9°119.8°
C06C09C11121.5°120.1°
O07C08H081109.5°109.4°
O07C08H083109.5°109.4°
O07C08H082109.5°109.5°
C10C09C11117.6°120.1°
C09C10H101119.9°120.1°
C09C11C12128.6°126.3°
C09C11C16123.6°126.3°
C12C11C16107.8°107.4°
C11C12N13107.1°108.6°
C11C12H121126.4°125.7°
C11C16C15107.7°107.1°
C11C16H161126.1°126.5°
C12N13C14124.6°125.5°
C12N13C15109.8°109.0°
N13C12H121126.4°125.7°
C14N13C15125.6°125.6°
N13C14H143109.5°109.5°
N13C14H141109.5°109.4°
N13C14H142109.5°109.5°
N13C15C16107.6°107.9°
N13C15C17129.4°126.0°
C16C15C17123.0°126.1°
C15C16H161126.2°126.4°
C15C17O18120.5°120.0°
C15C17N19117.3°120.0°
O18C17N19122.1°119.9°
C17N19C20123.0°120.1°
C17N19H191118.5°119.9°
N19C20C21120.1°119.6°
N19C20N25119.0°119.6°
C20N19H191118.5°120.0°
C21C20N25120.8°120.8°
C20C21C22119.2°118.9°
C20C21H211120.4°120.6°
C20N25C24122.2°122.0°
C21C22C23117.8°118.2°
C21C22C26119.2°120.9°
C22C21H211120.4°120.6°
C23C22C26122.9°120.9°
C22C23C24120.0°119.1°
C22C23H231120.0°120.5°
C22C26C27130.2°126.8°
C22C26N30122.2°126.9°
C23C24N25119.9°121.0°
C24C23H231120.0°120.4°
C23C24H241120.1°119.5°
N25C24H241120.1°119.5°
C27C26N30107.6°106.3°
C26C27N28107.7°107.7°
C26C27C33129.6°126.2°
C26N30C29108.3°107.1°
C26N30H301125.9°126.4°
N28C27C33122.7°126.1°
C27N28C29108.3°109.7°
C27C33C34118.9°120.1°
C27C33C39121.0°120.1°
N28C29N30108.1°109.2°
N28C29S31126.3°125.4°
N30C29S31125.5°125.4°
C29N30H301125.8°126.4°
C29S31C32108.4°100.0°
S31C32H323109.5°109.5°
S31C32H322109.5°109.5°
S31C32H321109.4°109.4°
C34C33C39120.1°119.8°
C33C34C35120.0°119.9°
C33C34H341120.0°120.1°
C33C39C38119.8°119.9°
C33C39H391120.1°120.1°
C34C35C36120.0°120.1°
C35C34H341120.0°120.0°
C34C35H351120.0°119.9°
C35C36F37119.8°119.9°
C35C36C38120.0°120.2°
C36C35H351120.0°120.0°
F37C36C38120.2°119.9°
C36C38C39120.1°120.1°
C36C38H381120.0°120.0°
C39C38H381120.0°119.9°
C38C39H391120.1°120.1°
H012C01H011109.4°109.5°
H012C01H013109.5°109.5°
H011C01H013109.4°109.4°
H081C08H083109.5°109.5°
H081C08H082109.5°109.5°
H083C08H082109.5°109.5°
H143C14H141109.4°109.5°
H143C14H142109.5°109.5°
H141C14H142109.5°109.5°
H323C32H322109.4°109.5°
H323C32H321109.5°109.4°
H322C32H321109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C01O02C03C04117.9°0.0°
C01O02C03C1062.5°179.7°
O02C01H012H011120.0°120.0°
O02C01H012H013120.0°120.0°
O02C01H011H013120.0°120.0°
O02C03C04C10179.6°179.6°
O02C03C04C05179.8°180.0°
O02C03C10C09179.5°179.7°
C03O02C01H012180.0°60.0°
C03O02C01H01160.0°60.0°
C03O02C01H01360.0°180.0°
O02C03C04H0410.2°0.1°
O02C03C10H1010.5°0.1°
C03C04C05H041180.0°179.9°
C03C04C05C060.1°0.0°
C04C03C10C090.9°0.6°
C03C04C05H051179.9°180.0°
C04C03C10H101179.1°179.7°
C10C03C04C050.2°0.3°
C03C10C09C061.5°0.6°
C03C10C09H101180.0°179.7°
C03C10C09C11179.5°179.7°
C10C03C04H041179.8°179.7°
C04C05C06H051180.0°179.9°
C04C05C06O07179.3°180.0°
C04C05C06C090.8°0.1°
C05C06O07C09178.5°179.9°
C05C06O07C0822.1°0.0°
C05C06C09C101.5°0.2°
C05C06C09C11179.4°180.0°
C06C05C04H041179.9°179.9°
O07C06C09C10179.9°179.7°
O07C06C09C112.0°0.0°
O07C06C05H0510.7°0.0°
C06O07C08H081180.0°180.0°
C06O07C08H08360.0°60.0°
C06O07C08H08260.0°60.0°
C09C06O07C08159.4°179.9°
C06C09C10C11178.0°179.7°
C06C09C11C1263.9°130.0°
C06C09C11C16117.1°50.3°
C09C06C05H051179.2°180.0°
C06C09C10H101178.5°179.8°
O07C08H081H083120.0°119.9°
O07C08H081H082120.0°120.0°
O07C08H083H082120.0°120.0°
C10C09C11C12118.1°49.7°
C10C09C11C1660.9°129.9°
C09C11C12C16179.1°179.7°
C09C11C12N13179.6°180.0°
C09C11C16C15179.3°179.9°
C11C09C10H1010.5°0.0°
C09C11C12H1210.4°0.1°
C09C11C16H1610.7°0.0°
C11C12N13H121180.0°179.9°
C11C12N13C14179.9°180.0°
C11C12N13C150.6°0.1°
C12C11C16C150.2°0.5°
C12C11C16H161179.8°179.7°
C16C11C12N130.5°0.3°
C11C16C15N130.2°0.4°
C11C16C15H161180.0°179.8°
C11C16C15C17179.4°179.8°
C16C11C12H121179.5°179.8°
C12N13C14C15179.4°179.9°
C12N13C15C160.5°0.2°
C12N13C15C17179.6°180.0°
C12N13C14H143180.0°87.1°
C12N13C14H14160.0°152.9°
C12N13C14H14260.0°32.9°
C14N13C15C16180.0°179.7°
C14N13C15C170.9°0.1°
C14N13C12H1210.1°0.1°
N13C14H143H141120.0°120.0°
N13C14H143H142120.0°120.0°
N13C14H141H142120.0°120.0°
N13C15C16C17179.1°179.8°
N13C15C17O1829.1°5.5°
N13C15C17N19151.8°174.5°
C15N13C12H121179.4°180.0°
C15N13C14H1430.6°92.8°
C15N13C14H141119.4°27.2°
C15N13C14H142120.6°147.2°
N13C15C16H161179.8°179.8°
C16C15C17O18149.9°174.2°
C16C15C17N1929.3°5.7°
C15C17O18N19179.1°180.0°
C15C17N19C20178.9°173.1°
C17C15C16H1610.6°0.0°
C15C17N19H1911.1°6.8°
O18C17N19C200.2°6.8°
O18C17N19H191179.8°173.2°
C17N19C20H191180.0°180.0°
C17N19C20C2130.4°21.8°
C17N19C20N25151.6°158.0°
N19C20C21N25178.0°179.8°
N19C20C21C22179.7°180.0°
N19C20N25C24179.2°179.7°
N19C20C21H2110.3°0.0°
C20C21C22H211180.0°180.0°
C20C21C22C231.6°0.1°
C20C21C22C26179.7°180.0°
C21C20N25C241.2°0.5°
C21C20N19H191149.6°158.3°
N25C20C21C221.7°0.2°
C20N25C24C230.6°0.5°
N25C20N19H19128.4°22.0°
N25C20C21H211178.3°179.8°
C20N25C24H241179.4°179.7°
C21C22C23C26178.0°179.9°
C21C22C23C241.1°0.1°
C21C22C26C27151.2°135.0°
C21C22C26N3029.6°45.3°
C21C22C23H231178.9°180.0°
C22C23C24H231180.0°180.0°
C22C23C24N250.6°0.2°
C23C22C26C2730.8°45.0°
C23C22C26N30148.5°134.6°
C23C22C21H211178.4°179.9°
C22C23C24H241179.4°180.0°
C26C22C23C24179.1°180.0°
C22C26C27N30179.4°179.7°
C22C26C27N28179.6°180.0°
C22C26C27C331.0°0.1°
C22C26N30C29179.5°179.9°
C26C22C21H2110.3°0.0°
C26C22C23H2310.9°0.0°
C22C26N30H3010.5°0.0°
C23C24N25H241180.0°179.8°
N25C24C23H231179.4°179.8°
C26C27N28C33179.5°180.0°
C26C27N28C290.2°0.0°
C27C26N30C290.1°0.4°
C26C27C33C34131.0°145.0°
C26C27C33C3950.6°35.3°
C27C26N30H301179.9°179.7°
N30C26C27N280.2°0.3°
N30C26C27C33179.7°179.8°
C26N30C29N280.1°0.4°
C26N30C29H301180.0°179.9°
C26N30C29S31179.8°179.8°
C27N28C29N300.2°0.3°
C27N28C29S31180.0°180.0°
N28C27C33C3449.6°35.0°
N28C27C33C39128.8°144.7°
C33C27N28C29179.8°180.0°
C27C33C34C39178.4°179.7°
C27C33C34C35179.3°180.0°
C27C33C39C38179.3°179.8°
C27C33C34H3410.7°0.1°
C27C33C39H3910.7°0.0°
N28C29N30S31179.8°179.7°
N28C29S31C32134.1°0.0°
N28C29N30H301179.9°179.7°
N30C29S31C3245.6°179.7°
S31C29N30H3010.2°0.0°
C29S31C32H323180.0°180.0°
C29S31C32H32260.0°60.0°
C29S31C32H32160.0°60.0°
S31C32H323H322120.0°120.0°
S31C32H323H321120.0°119.9°
S31C32H322H321120.0°120.0°
C33C34C35H341180.0°179.9°
C33C34C35C360.4°0.1°
C34C33C39C380.8°0.6°
C33C34C35H351179.6°180.0°
C34C33C39H391179.1°179.7°
C39C33C34C350.8°0.3°
C33C39C38C360.4°0.5°
C33C39C38H391180.0°179.7°
C39C33C34H341179.2°179.7°
C33C39C38H381179.6°179.7°
C34C35C36H351180.0°180.0°
C34C35C36F37179.9°180.0°
C34C35C36C380.1°0.0°
C35C36F37C38180.0°180.0°
C35C36C38C390.1°0.2°
C36C35C34H341179.6°180.0°
C35C36C38H381179.9°180.0°
F37C36C38C39179.9°179.8°
F37C36C35H3510.1°0.1°
F37C36C38H3810.1°0.0°
C36C38C39H381180.0°179.8°
C38C36C35H351179.9°179.9°
C36C38C39H391179.6°179.8°
H012C01H011H013120.0°120.0°
H041C04C05H0510.1°0.0°
H081C08H083H082120.0°120.1°
H143C14H141H142120.0°120.0°
H231C23C24H2410.6°0.1°
H323C32H322H321120.0°120.0°
H341C34C35H3510.4°0.1°
H381C38C39H3910.4°0.0°

221716

PDB entries from 2024-06-26

PDB statisticsPDBj update infoContact PDBjnumon