Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

D5H

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C18C17sing1.55Å1.50Å
C18C14sing1.51Å1.50Å
C17C16sing1.55Å1.51Å
O1C13doub1.22Å1.18Å
C14C13sing1.48Å1.47Å
C14C15doub1.34Å1.32Å
C13Nsing1.35Å1.31Å
C16C15sing1.51Å1.50Å
C11C12doub1.38Å1.37ÅAromatic
C11C10sing1.39Å1.37ÅAromatic
C12C7sing1.39Å1.38ÅAromatic
C15C19sing1.47Å1.45Å
NC10sing1.40Å1.34Å
C10C9doub1.39Å1.45ÅAromatic
COsing1.43Å1.39Å
C7C5sing1.48Å1.50Å
C7C8doub1.39Å1.36ÅAromatic
C6C5doub1.39Å1.37ÅAromatic
C6C1sing1.39Å1.38ÅAromatic
C5C4sing1.39Å1.35ÅAromatic
C1Osing1.36Å1.35Å
C1C2doub1.39Å1.36ÅAromatic
C4C3doub1.38Å1.34ÅAromatic
C9C8sing1.38Å1.36ÅAromatic
C9Fsing1.35Å1.28Å
C2C3sing1.38Å1.35ÅAromatic
C19O3doub1.21Å1.26Å
C19O2sing1.35Å1.16Å
C8H1sing1.08Å1.08Å
C4H2sing1.08Å1.08Å
C3H3sing1.08Å1.08Å
C2H4sing1.08Å1.08Å
CH5sing1.09Å1.10Å
CH6sing1.09Å1.10Å
CH7sing1.09Å1.10Å
C6H8sing1.08Å1.08Å
C12H9sing1.08Å1.08Å
C11H10sing1.08Å1.08Å
NH11sing0.97Å1.00Å
O2H12sing0.97Å0.95Å
C18H13sing1.09Å1.10Å
C18H14sing1.09Å1.10Å
C17H15sing1.09Å1.10Å
C17H16sing1.09Å1.10Å
C16H17sing1.09Å1.10Å
C16H18sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C17C18C14105.4°104.9°
C18C17C16105.9°101.8°
C17C18H13110.5°110.3°
C17C18H14110.5°110.3°
C18C17H15110.4°111.0°
C18C17H16110.3°110.9°
C18C14C13118.7°124.8°
C18C14C15110.4°110.5°
C14C18H13110.5°110.5°
C14C18H14110.5°110.3°
C17C16C15103.9°105.0°
C16C17H15110.3°110.9°
C16C17H16110.3°111.1°
C17C16H17110.8°110.4°
C17C16H18110.8°110.3°
O1C13C14116.1°120.0°
O1C13N120.6°120.0°
C13C14C15130.9°124.7°
C14C13N123.2°120.0°
C14C15C16112.0°110.5°
C14C15C19128.7°124.7°
C13NC10129.2°120.0°
C13NH11115.4°120.0°
C16C15C19119.3°124.7°
C15C16H17110.8°110.4°
C15C16H18110.9°110.3°
C12C11C10122.1°120.1°
C11C12C7122.6°119.9°
C11C12H9118.7°120.0°
C12C11H10118.9°119.9°
C11C10N128.3°119.9°
C11C10C9115.0°120.1°
C10C11H10118.9°120.0°
C12C7C5121.7°120.0°
C12C7C8116.8°120.0°
C7C12H9118.7°120.0°
C15C19O3118.9°120.0°
C15C19O2126.4°120.0°
NC10C9116.7°120.0°
C10NH11115.4°120.0°
C10C9C8120.7°120.0°
C10C9F119.5°120.0°
COC1122.0°117.0°
OCH5109.5°109.5°
OCH6109.5°109.4°
OCH7109.5°109.5°
C5C7C8121.5°120.0°
C7C5C6121.7°120.1°
C7C5C4121.1°120.1°
C7C8C9122.9°119.9°
C7C8H1118.6°120.0°
C5C6C1121.8°119.8°
C6C5C4117.1°119.8°
C5C6H8119.1°120.2°
C6C1O121.8°120.0°
C6C1C2118.8°120.0°
C1C6H8119.1°120.0°
C5C4C3121.8°119.9°
C5C4H2119.1°120.0°
OC1C2119.3°120.0°
C1C2C3119.2°120.2°
C1C2H4120.4°120.0°
C4C3C2121.2°120.2°
C3C4H2119.1°120.0°
C4C3H3119.4°119.9°
C8C9F119.9°120.0°
C9C8H1118.6°120.0°
C2C3H3119.4°119.9°
C3C2H4120.4°119.9°
O3C19O2114.7°120.0°
C19O2H12109.5°117.0°
H5CH6109.4°109.5°
H5CH7109.5°109.5°
H6CH7109.5°109.5°
H13C18H14109.5°110.4°
H15C17H16109.5°110.8°
H17C16H18109.5°110.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C17C18C14H13119.4°118.9°
C17C18C14H14119.3°118.8°
C18C17C16H15119.5°118.1°
C18C17C16H16119.4°118.2°
C17C18C14C13174.4°163.3°
C17C18C14C156.6°17.0°
C18C17C16C1515.0°25.2°
C17C18H13H14121.9°122.2°
C18C17H15H16121.6°123.8°
C18C17C16H17134.2°144.2°
C18C17C16H18104.1°93.6°
C14C18C17C1613.5°25.4°
C18C14C13O113.3°83.6°
C18C14C13C15178.7°179.7°
C18C14C13N164.8°96.4°
C18C14C15C163.4°0.3°
C18C14C15C19176.8°179.8°
C14C18H13H14121.9°122.2°
C14C18C17H15106.0°143.4°
C14C18C17H16132.9°92.9°
C17C16C15C1411.7°16.5°
C17C16C15H17119.1°118.9°
C17C16C15H18119.1°118.8°
C17C16C15C19168.4°163.5°
C16C17C18H13105.9°93.6°
C16C17C18H14132.8°144.1°
C16C17H15H16121.6°123.9°
C17C16H17H18122.6°122.2°
O1C13C14N178.1°180.0°
O1C13C14C15165.5°96.1°
O1C13NC101.2°4.1°
O1C13NH11178.8°176.0°
C13C14C15C16175.5°180.0°
C13C14C15C194.3°0.0°
C14C13NC10176.8°175.9°
C14C13NH113.2°4.0°
C13C14C18H1366.2°77.8°
C13C14C18H1455.1°44.5°
C15C14C13N16.4°83.9°
C14C15C16C19179.8°180.0°
C14C15C19O3172.1°5.0°
C14C15C19O27.9°174.9°
C15C14C18H13112.8°102.0°
C15C14C18H14125.9°135.8°
C14C15C16H17130.8°135.4°
C14C15C16H18107.4°102.3°
C13NC10C111.9°34.5°
C13NC10H11180.0°180.0°
C13NC10C9179.8°145.0°
C16C15C19O38.1°174.9°
C16C15C19O2171.9°5.1°
C15C16C17H15104.4°143.4°
C15C16C17H16134.5°92.9°
C15C16H17H18122.6°122.2°
C12C11C10H10180.0°179.8°
C11C12C7H9180.0°180.0°
C12C11C10N180.0°180.0°
C12C11C10C92.0°0.5°
C11C12C7C5178.7°180.0°
C11C12C7C80.1°0.0°
C10C11C12C71.4°0.2°
C11C10NC9178.0°179.5°
C11C10C9C81.5°0.5°
C11C10C9F179.9°179.8°
C10C11C12H9178.6°179.8°
C11C10NH11178.2°145.5°
C12C7C5C8178.8°180.0°
C12C7C5C6142.2°0.3°
C12C7C5C434.6°180.0°
C12C7C8C90.4°0.0°
C12C7C8H1179.6°180.0°
C7C12C11H10178.5°180.0°
C15C19O3O2180.0°180.0°
C15C19O2H12180.0°180.0°
C19C15C16H1749.3°44.5°
C19C15C16H1872.5°77.7°
NC10C9C8179.8°180.0°
NC10C9F1.6°0.2°
NC10C11H100.1°0.2°
C10C9C8C70.4°0.3°
C10C9C8F178.6°179.7°
C10C9C8H1179.6°179.8°
C9C10C11H10177.9°179.7°
C9C10NH110.2°34.9°
COC1C628.1°179.7°
COC1C2154.0°0.1°
OCH5H6120.0°119.9°
OCH5H7120.0°120.0°
OCH6H7120.0°120.0°
C7C5C6C4176.9°179.7°
C7C5C6C1177.8°179.7°
C7C5C4C3179.8°180.0°
C5C7C8C9179.2°180.0°
C5C7C8H10.8°0.1°
C7C5C4H20.2°0.0°
C7C5C6H82.2°0.1°
C5C7C12H91.3°0.0°
C8C7C5C636.6°179.7°
C8C7C5C4146.6°0.0°
C7C8C9H1180.0°179.9°
C7C8C9F179.0°180.0°
C8C7C12H9179.9°180.0°
C5C6C1H8180.0°179.7°
C5C6C1O178.5°179.8°
C5C6C1C20.6°0.6°
C6C5C4C32.9°0.3°
C6C5C4H2177.1°179.7°
C1C6C5C40.9°0.6°
C6C1OC2177.9°179.7°
C6C1C2C30.3°0.3°
C6C1C2H4179.7°179.7°
C5C4C3H2180.0°180.0°
C5C4C3C23.4°0.0°
C5C4C3H3176.6°179.9°
C4C5C6H8179.1°179.8°
OC1C2C3178.2°180.0°
OC1C2H41.8°0.0°
C1OCH5180.0°59.9°
C1OCH660.0°60.0°
C1OCH760.0°180.0°
OC1C6H81.5°0.1°
C1C2C3C41.7°0.0°
C1C2C3H4180.0°180.0°
C1C2C3H3178.3°179.9°
C2C1C6H8179.4°179.7°
C4C3C2H3180.0°180.0°
C4C3C2H4178.3°180.0°
FC9C8H11.1°0.1°
C2C3C4H2176.6°180.0°
O3C19O2H120.0°0.0°
H2C4C3H33.4°0.1°
H3C3C2H41.7°0.1°
H5CH6H7120.0°120.1°
H9C12C11H101.5°0.1°
H13C18C17H15134.7°24.4°
H13C18C17H1613.5°148.1°
H14C18C17H1513.4°97.8°
H14C18C17H16107.8°25.9°
H15C17C16H1714.7°97.7°
H15C17C16H18136.5°24.6°
H16C17C16H17106.4°26.0°
H16C17C16H1815.3°148.3°

248942

PDB entries from 2026-02-11

PDB statisticsPDBj update infoContact PDBjnumon