Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

D4Q

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
CC5doub1.38Å1.39ÅAromatic
CC1sing1.38Å1.39ÅAromatic
C16N2sing1.47Å1.48Å
C16C15sing1.53Å1.52Å
C5C4sing1.39Å1.37ÅAromatic
C1C2doub1.39Å1.40ÅAromatic
N2C17sing1.47Å1.46Å
C15C14sing1.53Å1.53Å
C17C13sing1.53Å1.52Å
C14C13sing1.53Å1.52Å
C4Fsing1.35Å1.36Å
C4C3doub1.38Å1.38ÅAromatic
C2C3sing1.40Å1.40ÅAromatic
C2C6sing1.48Å1.47Å
C13N1sing1.47Å1.46Å
C7C6doub1.33Å1.36ÅAromatic
C7C8sing1.45Å1.44ÅAromatic
N1C12sing1.38Å1.35Å
C6Ssing1.75Å1.75ÅAromatic
C8C12doub1.42Å1.43ÅAromatic
C8C9sing1.40Å1.41ÅAromatic
C12Nsing1.32Å1.35ÅAromatic
SC9sing1.76Å1.73ÅAromatic
C9C10doub1.42Å1.40ÅAromatic
NC11doub1.32Å1.34ÅAromatic
C11C10sing1.39Å1.40ÅAromatic
C10C18sing1.47Å1.50Å
C18Odoub1.22Å1.26Å
C18N3sing1.35Å1.33Å
C1H1sing1.08Å1.08Å
C3H2sing1.08Å1.08Å
C7H3sing1.08Å1.08Å
C11H4sing1.08Å1.08Å
C13H5sing1.09Å1.10Å
C14H6sing1.09Å1.10Å
C14H7sing1.09Å1.10Å
C15H8sing1.09Å1.10Å
C15H9sing1.09Å1.10Å
C16H10sing1.09Å1.10Å
C16H11sing1.09Å1.10Å
N3H12sing0.97Å1.00Å
N3H13sing0.97Å1.00Å
C5H14sing1.08Å1.08Å
CH15sing1.08Å1.08Å
N1H16sing0.97Å1.00Å
C17H17sing1.09Å1.10Å
C17H18sing1.09Å1.10Å
N2H19sing1.01Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C5CC1120.5°120.2°
CC5C4117.8°120.2°
CC5H14121.1°119.9°
C5CH15119.8°119.9°
CC1C2120.4°119.9°
CC1H1119.8°120.0°
C1CH15119.7°119.9°
N2C16C15110.6°109.5°
C16N2C17111.8°111.2°
N2C16H10109.2°109.4°
N2C16H11109.2°109.4°
C16N2H19108.9°110.9°
C16C15C14110.6°109.3°
C16C15H8109.2°109.5°
C16C15H9109.2°109.5°
C15C16H10109.2°109.5°
C15C16H11109.2°109.5°
C5C4F118.4°119.9°
C5C4C3123.5°120.2°
C4C5H14121.1°119.9°
C1C2C3119.2°119.8°
C1C2C6120.8°120.1°
C2C1H1119.8°120.1°
N2C17C13112.6°109.5°
N2C17H17108.7°109.4°
N2C17H18108.7°109.5°
C17N2H19108.9°111.0°
C15C14C13111.2°109.1°
C15C14H6109.1°109.5°
C15C14H7109.0°109.5°
C14C15H8109.2°109.5°
C14C15H9109.2°109.5°
C17C13C14110.1°109.3°
C17C13N1109.1°109.5°
C17C13H5108.6°109.6°
C13C17H17108.7°109.5°
C13C17H18108.7°109.4°
C14C13N1110.9°109.5°
C14C13H5108.6°109.5°
C13C14H6109.0°109.6°
C13C14H7109.1°109.5°
FC4C3118.1°119.9°
C4C3C2118.5°119.8°
C4C3H2120.7°120.1°
C3C2C6120.0°120.1°
C2C3H2120.7°120.1°
C2C6C7128.8°124.4°
C2C6S119.5°124.4°
C13N1C12123.6°120.0°
N1C13H5109.4°109.5°
C13N1H16105.8°120.0°
C6C7C8113.6°114.6°
C7C6S111.5°111.2°
C6C7H3123.2°122.7°
C7C8C12130.5°130.0°
C7C8C9111.6°112.0°
C8C7H3123.2°122.6°
N1C12C8120.6°119.5°
N1C12N117.5°119.5°
C12N1H16105.8°120.0°
C6SC992.0°92.2°
C12C8C9117.8°118.0°
C8C12N121.6°121.0°
C8C9S111.2°110.0°
C8C9C10120.3°118.7°
C12NC11118.7°122.5°
SC9C10128.4°131.4°
C9C10C11116.8°119.0°
C9C10C18118.7°120.5°
NC11C10124.6°120.8°
NC11H4117.7°119.6°
C11C10C18124.4°120.5°
C10C11H4117.7°119.6°
C10C18O119.9°120.0°
C10C18N3118.2°120.0°
OC18N3121.9°120.0°
C18N3H12120.0°120.0°
C18N3H13120.0°120.0°
H6C14H7109.5°109.6°
H8C15H9109.5°109.5°
H10C16H11109.5°109.5°
H12N3H13120.0°120.0°
H17C17H18109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C5CC1H15180.0°179.4°
CC5C4H14180.0°179.7°
C5CC1C20.3°0.6°
CC5C4F179.4°179.7°
CC5C4C31.1°0.3°
C5CC1H1179.7°179.7°
C1CC5C40.9°0.6°
CC1C2H1180.0°179.7°
CC1C2C30.2°0.3°
CC1C2C6179.2°179.8°
C1CC5H14179.1°179.7°
N2C16C15H10120.2°120.0°
N2C16C15H11120.2°120.0°
C16N2C17H19120.4°124.1°
N2C16C15C1456.2°59.2°
C16N2C17C1357.5°61.7°
N2C16C15H8176.4°60.8°
N2C16C15H964.0°179.2°
N2C16H10H11119.5°119.9°
C16N2C17H17178.0°58.3°
C16N2C17H1862.9°178.3°
C15C16N2C1757.8°61.7°
C16C15C14H8120.2°119.9°
C16C15C14H9120.2°120.0°
C16C15C14C1354.5°57.6°
C16C15C14H665.8°177.5°
C16C15C14H7174.8°62.3°
C16C15H8H9119.5°120.1°
C15C16H10H11119.5°120.0°
C15C16N2H1962.5°62.4°
C5C4FC3178.4°179.9°
C5C4C3C20.6°0.1°
C5C4C3H2179.5°180.0°
C4C5CH15179.1°180.0°
C1C2C3C40.1°0.0°
C1C2C3C6179.4°179.9°
C1C2C6C77.1°180.0°
C1C2C6S178.6°0.0°
C1C2C3H2179.9°180.0°
C2C1CH15179.7°180.0°
N2C17C13H17120.5°119.9°
N2C17C13H18120.4°120.0°
N2C17C13C1454.4°59.1°
N2C17C13N1176.4°179.1°
N2C17C13H564.4°60.8°
C17N2C16H1062.4°178.2°
C17N2C16H11178.0°58.3°
N2C17H17H18118.5°120.0°
C15C14C13C1752.8°57.6°
C15C14C13H6120.3°119.9°
C15C14C13H7120.3°119.9°
C15C14C13N1173.7°177.6°
C15C14C13H566.0°62.4°
C15C14H6H7119.2°120.2°
C14C15H8H9119.5°120.1°
C14C15C16H1063.9°179.2°
C14C15C16H11176.4°60.8°
C17C13C14N1120.9°119.9°
C17C13C14H5118.8°120.0°
C17C13N1H5118.8°120.1°
C17C13N1C1277.6°85.1°
C17C13C14H667.5°177.5°
C17C13C14H7173.1°62.3°
C17C13N1H1644.4°94.9°
C13C17H17H18118.6°120.0°
C13C17N2H1962.8°62.4°
C14C13N1H5119.8°120.0°
C14C13N1C12161.0°155.1°
C13C14H6H7119.2°120.2°
C13C14C15H8174.7°62.3°
C13C14C15H965.7°177.6°
C14C13N1H1677.1°24.9°
C14C13C17H17174.9°60.8°
C14C13C17H1866.0°179.2°
FC4C3C2178.9°180.0°
FC4C3H21.1°0.0°
FC4C5H140.7°0.0°
C4C3C2H2180.0°180.0°
C4C3C2C6179.3°180.0°
C3C4C5H14178.9°180.0°
C3C2C6C7172.3°0.1°
C3C2C6S2.0°180.0°
C3C2C1H1179.8°180.0°
C2C6C7S174.7°180.0°
C2C6C7C8176.4°180.0°
C2C6SC9177.1°180.0°
C6C2C1H10.8°0.1°
C6C2C3H20.7°0.0°
C2C6C7H33.6°0.3°
C13N1C12H16121.9°180.0°
C13N1C12C8156.7°180.0°
C13N1C12N17.6°0.0°
N1C13C14H653.4°62.6°
N1C13C14H766.1°57.6°
N1C13C17H1763.2°59.1°
N1C13C17H1855.9°60.9°
C6C7C8H3180.0°179.7°
C6C7C8C12177.2°180.0°
C6C7C8C90.7°0.0°
C7C6SC91.8°0.0°
C7C8C12N13.7°0.0°
C8C7C6S1.8°0.0°
C7C8C12C9177.8°179.9°
C7C8C12N177.8°180.0°
C7C8C9S0.7°0.1°
C7C8C9C10179.0°180.0°
N1C12C8N174.1°180.0°
N1C12C8C9178.5°180.0°
N1C12NC11178.2°180.0°
C12N1C13H541.2°35.0°
C6SC9C81.4°0.1°
C6SC9C10179.5°180.0°
SC6C7H3178.2°179.7°
C12C8C9S178.9°180.0°
C12C8C9C102.8°0.1°
C8C12NC113.9°0.0°
C12C8C7H32.8°0.3°
C8C12N1H1634.8°0.0°
C9C8C12N4.4°0.1°
C8C9SC10178.1°179.9°
C8C9C10C110.9°0.0°
C8C9C10C18175.8°180.0°
C9C8C7H3179.3°179.7°
C12NC11C101.9°0.0°
C12NC11H4178.1°180.0°
NC12N1H16139.6°180.0°
SC9C10C11178.8°179.9°
SC9C10C182.1°0.1°
C9C10C11N0.4°0.0°
C9C10C11C18176.5°180.0°
C9C10C18O9.9°0.0°
C9C10C18N3169.2°180.0°
C9C10C11H4179.6°180.0°
NC11C10H4180.0°179.9°
NC11C10C18176.2°180.0°
C11C10C18O173.6°180.0°
C11C10C18N37.3°0.0°
C10C18ON3179.1°180.0°
C18C10C11H43.8°0.0°
C10C18N3H12179.1°0.0°
C10C18N3H130.9°180.0°
OC18N3H120.0°180.0°
OC18N3H13180.0°0.1°
C18N3H12H13180.0°179.9°
H1C1CH150.3°0.3°
H5C13C14H6173.7°57.5°
H5C13C14H754.2°177.7°
H5C13N1H16163.1°145.0°
H5C13C17H1756.1°179.2°
H5C13C17H18175.2°59.2°
H6C14C15H854.4°57.6°
H6C14C15H9174.1°62.5°
H7C14C15H865.0°177.8°
H7C14C15H954.6°57.7°
H8C15C16H1056.2°59.2°
H8C15C16H1163.4°179.2°
H9C15C16H10175.9°60.8°
H9C15C16H1156.2°59.2°
H10C16N2H19177.3°57.7°
H11C16N2H1957.6°177.6°
H14C5CH150.9°0.3°
H17C17N2H1957.7°177.7°
H18C17N2H19176.7°57.6°

248636

PDB entries from 2026-02-04

PDB statisticsPDBj update infoContact PDBjnumon