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D3X

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2sing1.53Å1.52Å
C1O8sing1.43Å1.43Å
C1O10sing1.43Å1.43Å
N1C3sing1.35Å1.33Å
N1O11sing1.42Å1.38Å
O1C3doub1.21Å1.23Å
S1N2sing1.65Å1.54Å
S1O2doub1.42Å1.44Å
S1O3doub1.42Å1.44Å
S1C12sing1.76Å1.61Å
C2O4sing1.43Å1.42Å
C2C7sing1.53Å1.52Å
N2C9sing1.47Å1.46Å
N2C10sing1.47Å1.47Å
C3C10sing1.51Å1.51Å
C4C5sing1.53Å1.53Å
C4O9sing1.43Å1.43Å
C5C6sing1.53Å1.53Å
C5O8sing1.43Å1.44Å
O5C7sing1.43Å1.43Å
C6O6sing1.43Å1.41Å
C6C7sing1.53Å1.54Å
O7C16sing1.36Å1.38Å
O7C17sing1.43Å1.44Å
C8C9sing1.53Å1.53Å
C8O10sing1.43Å1.42Å
C11C14doub1.38Å1.40ÅAromatic
C11C16sing1.39Å1.40ÅAromatic
C12C13doub1.38Å1.41ÅAromatic
C12C14sing1.38Å1.40ÅAromatic
C13C15sing1.38Å1.40ÅAromatic
C15C16doub1.39Å1.40ÅAromatic
C1H1sing1.09Å1.10Å
N1HN1sing0.97Å1.00Å
C2H2sing1.09Å1.10Å
C4H4sing1.09Å1.10Å
C4H4Asing1.09Å1.10Å
O4HO4sing0.97Å0.95Å
C5H5sing1.09Å1.10Å
O5HO5sing0.97Å0.95Å
C6H6sing1.09Å1.10Å
O6HO6sing0.97Å0.95Å
C7H7sing1.09Å1.10Å
C8H8sing1.09Å1.10Å
C8H8Asing1.09Å1.10Å
C9H9sing1.09Å1.10Å
C9H9Asing1.09Å1.10Å
O9HO9sing0.97Å0.95Å
C10H10sing1.09Å1.10Å
C10H10Asing1.09Å1.10Å
C11H11sing1.08Å1.08Å
O11HO11sing0.97Å0.95Å
C13H13sing1.08Å1.08Å
C14H14sing1.08Å1.08Å
C15H15sing1.08Å1.08Å
C17H17sing1.09Å1.10Å
C17H17Asing1.09Å1.10Å
C17H17Bsing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1O8108.8°109.4°
C2C1O10108.0°109.5°
C1C2O4106.6°109.5°
C1C2C7111.5°109.1°
C2C1H1110.7°109.5°
C1C2H2110.5°109.5°
O8C1O10108.9°109.5°
C1O8C5113.7°114.1°
O8C1H1109.8°109.5°
C1O10C8114.9°114.0°
O10C1H1110.5°109.5°
C3N1O11115.7°120.1°
N1C3O1122.2°120.0°
N1C3C10116.9°120.0°
C3N1HN1122.2°120.0°
O11N1HN1122.2°120.0°
N1O11HO11109.5°114.0°
O1C3C10120.8°120.0°
N2S1O2108.6°106.4°
N2S1O3111.8°106.4°
N2S1C12113.0°107.2°
S1N2C9118.6°120.0°
S1N2C10119.6°120.0°
O2S1O3108.5°123.1°
O2S1C12107.3°106.4°
O3S1C12107.4°106.4°
S1C12C13121.9°120.0°
S1C12C14118.8°119.9°
O4C2C7110.9°109.5°
O4C2H2111.1°109.5°
C2O4HO4109.5°114.0°
C2C7O5108.4°109.5°
C2C7C6111.5°109.0°
C7C2H2106.2°109.6°
C2C7H7109.9°109.6°
C9N2C10121.7°120.0°
N2C9C8109.2°109.5°
N2C9H9109.5°109.4°
N2C9H9A109.6°109.5°
N2C10C3106.7°109.5°
N2C10H10110.4°109.5°
N2C10H10A110.4°109.4°
C3C10H10110.4°109.5°
C3C10H10A110.4°109.5°
C5C4O9111.6°109.5°
C4C5C6114.2°109.5°
C4C5O8108.0°109.5°
C5C4H4108.8°109.5°
C5C4H4A108.8°109.5°
C4C5H5108.0°109.5°
O9C4H4108.8°109.5°
O9C4H4A108.8°109.4°
C4O9HO9109.5°114.0°
C6C5O8111.5°109.4°
C5C6O6106.6°109.5°
C5C6C7111.4°109.1°
C6C5H5104.2°109.5°
C5C6H6110.1°109.5°
O8C5H5110.9°109.5°
O5C7C6112.3°109.5°
C7O5HO5109.5°114.0°
O5C7H7109.0°109.5°
O6C6C7109.7°109.5°
O6C6H6111.9°109.5°
C6O6HO6109.5°114.0°
C7C6H6107.1°109.6°
C6C7H7105.8°109.6°
C16O7C17123.5°117.0°
O7C16C11117.7°120.1°
O7C16C15122.5°120.1°
O7C17H17109.5°109.4°
O7C17H17A109.4°109.5°
O7C17H17B109.4°109.5°
C9C8O10107.5°109.5°
C9C8H8110.1°109.5°
C9C8H8A110.1°109.5°
C8C9H9109.6°109.5°
C8C9H9A109.5°109.5°
O10C8H8110.1°109.5°
O10C8H8A110.1°109.5°
C14C11C16120.6°120.0°
C11C14C12120.3°120.0°
C14C11H11119.7°120.0°
C11C14H14119.8°120.0°
C11C16C15119.8°119.9°
C16C11H11119.7°120.0°
C13C12C14119.2°120.1°
C12C13C15120.3°120.1°
C12C13H13119.9°120.0°
C12C14H14119.9°120.0°
C13C15C16119.8°120.0°
C15C13H13119.9°120.0°
C13C15H15120.1°120.0°
C16C15H15120.1°120.0°
H4C4H4A110.2°109.5°
H8C8H8A108.8°109.4°
H9C9H9A109.4°109.5°
H10C10H10A108.5°109.4°
H17C17H17A109.5°109.4°
H17C17H17B109.5°109.5°
H17AC17H17B109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1O8O10117.6°120.0°
C2C1O8H1121.3°120.0°
C2C1O10H1121.2°120.1°
C1C2O4C7121.6°119.6°
C1C2O4H2120.5°120.1°
C1C2C7H2120.5°120.0°
C2C1O8C562.8°61.2°
C1C2C7O5175.0°176.9°
C1C2C7C651.0°57.0°
C2C1O10C8141.4°175.0°
C1C2O4HO4180.0°60.1°
C1C2C7H765.9°63.0°
O8C1O10H1120.7°120.0°
O8C1C2O4178.9°177.5°
O8C1C2C757.7°57.7°
C1O8C5C4174.2°178.9°
C1O8C5C659.5°61.2°
O8C1O10C8100.5°65.0°
O8C1C2H260.2°62.4°
C1O8C5H556.1°58.8°
O10C1C2O462.9°62.5°
O10C1C2C7175.9°177.6°
O10C1O8C5179.6°178.9°
C1O10C8C9164.6°180.0°
O10C1C2H258.0°57.6°
C1O10C8H844.6°60.0°
C1O10C8H8A75.4°60.0°
C3N1O11HN1180.0°180.0°
N1C3O1C10178.9°180.0°
N1C3C10N2128.3°180.0°
N1C3C10H10111.7°60.0°
N1C3C10H10A8.3°60.0°
C3N1O11HO111.3°180.0°
O11N1C3O12.8°0.0°
O11N1C3C10176.1°180.0°
O1C3C10N250.7°0.0°
O1C3N1HN1177.2°180.0°
O1C3C10H1069.3°120.0°
O1C3C10H10A170.7°120.0°
N2S1O2O3121.8°123.0°
N2S1O2C12122.4°114.1°
N2S1O3C12124.5°114.1°
S1N2C9C10177.8°179.9°
S1N2C10C390.2°95.0°
S1N2C9C8150.3°95.0°
N2S1C12C1390.0°90.0°
N2S1C12C1492.7°90.0°
S1N2C9H989.7°145.0°
S1N2C9H9A30.3°25.0°
S1N2C10H10149.8°145.0°
S1N2C10H10A29.8°25.1°
O2S1O3C12115.7°122.9°
O2S1N2C9156.5°156.5°
O2S1N2C1025.7°23.6°
O2S1C12C13150.3°23.6°
O2S1C12C1427.0°156.4°
O3S1N2C936.8°23.6°
O3S1N2C10145.4°156.5°
O3S1C12C1333.8°156.4°
O3S1C12C14143.6°23.6°
C12S1N2C984.6°90.0°
C12S1N2C1093.3°89.9°
S1C12C14C11177.5°180.0°
S1C12C13C14177.4°180.0°
S1C12C13C15178.4°180.0°
S1C12C13H131.6°0.0°
S1C12C14H142.6°0.0°
O4C2C7H2120.9°120.2°
O4C2C7O566.3°63.3°
O4C2C7C6169.6°176.9°
O4C2C1H158.2°57.5°
O4C2C7H752.7°56.9°
C2C7C6C546.4°57.0°
C2C7O5C6123.6°119.5°
C2C7O5H7119.6°120.2°
C2C7C6O6164.3°176.9°
C2C7C6H7119.4°120.0°
C7C2C1H163.0°62.3°
C7C2O4HO458.4°179.7°
C2C7O5HO5180.0°60.0°
C2C7C6H674.1°62.9°
C9N2C10C387.6°85.0°
N2C9C8H9120.0°119.9°
N2C9C8H9A120.0°120.0°
N2C9C8O1078.4°65.0°
N2C9C8H8161.6°175.0°
N2C9C8H8A41.6°55.0°
N2C9H9H9A120.1°120.0°
C9N2C10H1032.5°35.0°
C9N2C10H10A152.4°155.0°
N2C10C3H10120.0°120.0°
N2C10C3H10A120.0°120.0°
C10N2C9C831.9°85.0°
C10N2C9H988.1°35.0°
C10N2C9H9A151.9°155.0°
N2C10H10H10A121.1°119.9°
C10C3N1HN13.9°0.0°
C3C10H10H10A121.2°120.0°
C5C4O9H4120.0°120.0°
C5C4O9H4A120.0°120.0°
C4C5C6O8122.8°120.0°
C4C5C6H5117.5°120.0°
C4C5O8H5118.1°120.0°
C4C5C6O667.9°62.5°
C4C5C6C7172.4°177.6°
C5C4H4H4A119.1°120.0°
C4C5C6H653.7°57.6°
C5C4O9HO9180.0°180.0°
O9C4C5C650.2°175.0°
O9C4C5O874.5°65.0°
O9C4H4H4A119.2°119.9°
O9C4C5H5165.6°55.0°
C6C5O8H5115.6°120.0°
C5C6C7O5168.3°176.8°
C5C6O6C7120.8°119.6°
C5C6O6H6120.5°120.1°
C5C6C7H6120.5°120.0°
C6C5C4H4170.2°55.0°
C6C5C4H4A69.8°65.0°
C5C6O6HO6180.0°180.0°
C5C6C7H773.0°63.0°
O8C5C6O6169.3°177.5°
O8C5C6C749.6°57.6°
C5O8C1H158.4°58.8°
O8C5C4H445.6°174.9°
O8C5C4H4A165.6°54.9°
O8C5C6H669.1°62.4°
O5C7C6O673.9°63.3°
O5C7C6H7118.8°120.2°
O5C7C2H254.6°56.9°
O5C7C6H647.7°56.9°
O6C6C7H6121.6°120.2°
O6C6C5H549.6°57.5°
O6C6C7H744.9°56.9°
C6C7C2H269.5°62.9°
C7C6C5H570.1°62.4°
C6C7O5HO556.4°179.5°
C7C6O6HO659.2°60.4°
O7C16C11C14179.5°180.0°
O7C16C11C15179.0°180.0°
O7C16C15C13178.5°180.0°
O7C16C11H110.5°0.3°
O7C16C15H151.5°0.1°
C16O7C17H17180.0°60.0°
C16O7C17H17A60.0°59.9°
C16O7C17H17B60.0°180.0°
C17O7C16C11162.4°180.0°
C17O7C16C1516.6°0.0°
O7C17H17H17A120.0°119.9°
O7C17H17H17B120.0°120.0°
O7C17H17AH17B120.0°120.1°
C9C8O10H8120.0°120.0°
C9C8O10H8A120.0°120.0°
C9C8H8H8A120.8°120.0°
C8C9H9H9A120.1°120.1°
C8O10C1H120.2°55.0°
O10C8H8H8A120.8°120.0°
O10C8C9H941.6°55.0°
O10C8C9H9A161.6°175.0°
C14C11C16H11180.0°179.7°
C11C14C12C130.0°0.0°
C11C14C12H14180.0°180.0°
C14C11C16C150.5°0.0°
C16C11C14C120.8°0.1°
C11C16C15C130.5°0.0°
C16C11C14H14179.2°180.0°
C11C16C15H15179.6°179.9°
C12C13C15H13180.0°180.0°
C12C13C15C161.2°0.1°
C13C12C14H14180.0°180.0°
C12C13C15H15178.8°179.9°
C14C12C13C151.0°0.0°
C12C14C11H11179.3°179.7°
C14C12C13H13179.0°180.0°
C13C15C16H15180.0°179.9°
C15C16C11H11179.5°179.7°
C16C15C13H13178.8°180.0°
H1C1C2H2179.1°177.6°
HN1N1O11HO11178.7°0.0°
H2C2O4HO459.5°60.1°
H2C2C7H7173.6°177.1°
H4C4C5H574.4°65.0°
H4C4O9HO960.0°60.0°
H4AC4C5H545.6°175.0°
H4AC4O9HO960.0°59.9°
H5C5C6H6171.2°177.6°
HO5O5C7H760.4°60.2°
H6C6O6HO659.5°59.8°
H6C6C7H7166.5°177.1°
H8C8C9H978.4°65.1°
H8C8C9H9A41.6°55.0°
H8AC8C9H9161.6°175.0°
H8AC8C9H9A78.4°65.0°
H11C11C14H140.8°0.3°
H13C13C15H151.2°0.1°
H17C17H17AH17B120.0°120.0°

248636

PDB entries from 2026-02-04

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