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D3M

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C5CL1sing1.74Å1.73Å
CL2C2sing1.74Å1.73Å
C7C1sing1.47Å1.50Å
C2C1doub1.40Å1.44ÅAromatic
C1C6sing1.40Å1.45ÅAromatic
C7O1sing1.35Å1.26Å
O1HO1sing0.97Å0.95Å
C2C3sing1.38Å1.42ÅAromatic
O2C7doub1.22Å1.26Å
C3C4doub1.38Å1.41ÅAromatic
C3H3sing1.08Å1.08Å
C6O3sing1.36Å1.41Å
O3C8sing1.43Å1.45Å
C4C5sing1.38Å1.42ÅAromatic
C4H4sing1.08Å1.08Å
C6C5doub1.39Å1.44ÅAromatic
C8H8sing1.09Å1.10Å
C8H8Asing1.09Å1.10Å
C8H8Bsing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
CL1C5C4117.7°119.9°
CL1C5C6122.1°120.0°
CL2C2C1122.3°120.0°
CL2C2C3116.9°120.0°
C7C1C2120.7°120.2°
C7C1C6121.0°120.2°
C1C7O1115.8°120.0°
C1C7O2117.1°120.0°
C2C1C6118.3°119.6°
C1C2C3120.9°119.9°
C1C6O3120.4°120.1°
C1C6C5119.9°119.7°
C7O1HO1109.5°117.0°
O1C7O2127.2°120.0°
C2C3C4120.4°120.3°
C2C3H3119.8°119.9°
C4C3H3119.8°119.8°
C3C4C5120.3°120.4°
C3C4H4119.8°119.8°
C6O3C8111.6°117.0°
O3C6C5119.6°120.1°
O3C8H8109.5°109.4°
O3C8H8A109.4°109.4°
O3C8H8B109.5°109.5°
C5C4H4119.8°119.8°
C4C5C6120.1°120.1°
H8C8H8A109.5°109.4°
H8C8H8B109.5°109.5°
H8AC8H8B109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
CL1C5C6C1179.7°179.9°
CL1C5C4C3179.7°180.0°
CL1C5C6O30.3°0.0°
CL1C5C4C6179.7°180.0°
CL1C5C4H40.2°0.1°
CL2C2C1C70.7°0.3°
CL2C2C1C3179.6°180.0°
CL2C2C1C6179.9°180.0°
CL2C2C3C4179.9°179.9°
CL2C2C3H30.1°0.0°
C7C1C2C6179.4°179.6°
C1C7O1O2179.0°180.0°
C1C7O1HO1179.0°180.0°
C7C1C2C3179.7°179.7°
C7C1C6O30.7°0.3°
C7C1C6C5179.9°179.8°
C2C1C7O186.8°90.3°
C2C1C7O292.4°89.7°
C1C2C3C40.2°0.1°
C1C2C3H3179.7°179.9°
C2C1C6O3179.9°180.0°
C2C1C6C50.5°0.1°
C6C1C7O192.6°90.0°
C6C1C2C30.3°0.0°
C6C1C7O288.2°90.0°
C1C6O3C5179.4°179.9°
C1C6O3C893.3°90.0°
C1C6C5C40.6°0.1°
HO1O1C7O20.0°0.0°
C2C3C4H3180.0°179.9°
C2C3C4C50.4°0.1°
C2C3C4H4179.7°179.9°
C3C4C5H4180.0°180.0°
C3C4C5C60.6°0.0°
H3C3C4C5179.6°180.0°
H3C3C4H40.3°0.0°
O3C6C5C4180.0°180.0°
C6O3C8H8120.2°180.0°
C6O3C8H8A0.2°60.1°
C6O3C8H8B119.8°60.0°
C8O3C6C587.3°89.9°
O3C8H8H8A120.0°119.9°
O3C8H8H8B120.0°120.0°
O3C8H8AH8B120.0°120.0°
H4C4C5C6179.5°180.0°
H8C8H8AH8B120.0°120.0°

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PDB entries from 2024-07-17

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