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D2S

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2sing1.38Å1.38ÅAromatic
C1C6doub1.39Å1.39ÅAromatic
C1H1sing1.08Å1.08Å
O1C2sing1.36Å1.27Å
O1HO1sing0.97Å0.95Å
S1S2sing2.05Å2.00Å
S1C3sing1.76Å1.73Å
C2C3doub1.39Å1.39ÅAromatic
S2C9sing1.76Å1.73Å
C3C4sing1.39Å1.39ÅAromatic
O3C6sing1.36Å1.37Å
O3HO3sing0.97Å0.95Å
C4C5doub1.38Å1.37ÅAromatic
C4H4sing1.08Å1.08Å
O4C8sing1.36Å1.26Å
C5C6sing1.39Å1.41ÅAromatic
C5H5sing1.08Å1.08Å
O5C12sing1.36Å1.37Å
O5HO5sing0.97Å0.95Å
C7C8sing1.38Å1.39ÅAromatic
C7C12doub1.39Å1.38ÅAromatic
C8C9doub1.39Å1.39ÅAromatic
C9C10sing1.39Å1.41ÅAromatic
C10C11doub1.38Å1.38ÅAromatic
C10H10sing1.08Å1.08Å
C11C12sing1.39Å1.39ÅAromatic
C11H11sing1.08Å1.08Å
O4H9sing0.97Å0.95Å
C7H7sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1C6121.3°120.0°
C2C1H1119.4°120.0°
C1C2O1121.6°120.1°
C1C2C3116.9°119.9°
C6C1H1119.3°120.0°
C1C6O3122.9°119.9°
C1C6C5121.5°120.1°
C2O1HO1109.5°114.0°
O1C2C3121.5°120.0°
S2S1C3103.7°103.0°
S1S2C9107.3°103.0°
S1C3C2120.3°120.0°
S1C3C4117.5°120.1°
C2C3C4122.2°119.9°
S2C9C8120.3°120.0°
S2C9C10116.7°120.0°
C3C4C5120.7°120.0°
C3C4H4119.7°120.0°
C6O3HO3109.5°114.0°
O3C6C5115.6°120.0°
C5C4H4119.6°120.0°
C4C5C6117.3°120.1°
C4C5H5121.3°120.0°
O4C8C7121.2°120.1°
O4C8C9121.4°120.1°
C8O4H9109.5°114.0°
C6C5H5121.4°119.9°
C12O5HO5109.5°113.9°
O5C12C7121.3°119.9°
O5C12C11117.1°120.0°
C8C7C12120.5°120.0°
C7C8C9117.3°119.8°
C8C7H7119.7°120.0°
C7C12C11121.6°120.1°
C12C7H7119.7°120.0°
C8C9C10122.9°119.9°
C9C10C11118.5°120.0°
C9C10H10120.7°120.0°
C11C10H10120.8°120.0°
C10C11C12119.1°120.2°
C10C11H11120.5°119.9°
C12C11H11120.4°119.9°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1C6H1180.0°179.7°
C1C2O1C3179.4°180.0°
C1C2O1HO1180.0°89.9°
C1C2C3S1179.0°180.0°
C1C2C3C40.1°0.1°
C2C1C6O3179.8°180.0°
C2C1C6C50.2°0.0°
C6C1C2O1179.4°179.9°
C6C1C2C30.1°0.0°
C1C6O3C5180.0°180.0°
C1C6O3HO3180.0°90.0°
C1C6C5C40.1°0.1°
C1C6C5H5179.9°180.0°
H1C1C2O10.6°0.3°
H1C1C2C3179.9°179.7°
H1C1C6O30.2°0.3°
H1C1C6C5179.8°179.7°
O1C2C3S10.4°0.0°
O1C2C3C4179.6°179.9°
HO1O1C2C30.6°90.1°
S2S1C3C267.1°180.0°
S2S1C3C4112.1°0.0°
S1S2C9C879.9°180.0°
S1S2C9C10103.9°0.1°
S1C3C2C4179.2°180.0°
C3S1S2C997.1°85.0°
S1C3C4C5178.9°179.9°
S1C3C4H41.1°0.0°
C2C3C4C50.3°0.1°
C2C3C4H4179.7°180.0°
S2C9C8O41.2°0.0°
S2C9C8C7175.6°180.0°
S2C9C8C10176.0°179.9°
S2C9C10C11174.3°179.9°
S2C9C10H105.7°0.1°
C3C4C5H4180.0°179.9°
C3C4C5C60.1°0.1°
C3C4C5H5179.9°179.9°
O3C6C5C4179.9°180.0°
O3C6C5H50.1°0.0°
HO3O3C6C50.1°90.0°
C4C5C6H5180.0°180.0°
H4C4C5C6179.9°180.0°
H4C4C5H50.1°0.0°
O4C8C7C9176.8°180.0°
O4C8C7C12175.4°180.0°
O4C8C9C10177.2°180.0°
O4C8C7H74.6°0.3°
O5C12C7C8176.9°180.0°
O5C12C7C11178.7°180.0°
O5C12C11C10178.5°180.0°
O5C12C11H111.5°0.1°
O5C12C7H73.1°0.3°
HO5O5C12C7180.0°90.0°
HO5O5C12C111.2°90.0°
C8C7C12H7180.0°179.7°
C7C8C9C100.4°0.1°
C8C7C12C111.8°0.0°
C7C8O4H9180.0°90.0°
C12C7C8C91.4°0.0°
C7C12C11C100.3°0.1°
C7C12C11H11179.7°179.9°
C8C9C10C111.8°0.1°
C8C9C10H10178.2°180.0°
C9C8O4H93.3°90.1°
C9C8C7H7178.6°179.7°
C9C10C11H10180.0°179.9°
C9C10C11C121.4°0.1°
C9C10C11H11178.6°179.9°
C10C11C12H11180.0°180.0°
H10C10C11C12178.6°180.0°
H10C10C11H111.4°0.0°
C11C12C7H7178.2°179.7°

223532

PDB entries from 2024-08-07

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