Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

D2J

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N1C2doub1.33Å1.35ÅAromatic
N1C6sing1.33Å1.36ÅAromatic
C2N3sing1.32Å1.35ÅAromatic
C2NACsing1.38Å1.39Å
N3C4doub1.34Å1.35ÅAromatic
C4C5sing1.42Å1.42ÅAromatic
C4NAQsing1.33Å1.35ÅAromatic
C5C6doub1.42Å1.43ÅAromatic
C5CAYsing1.40Å1.43ÅAromatic
C6NADsing1.38Å1.40Å
CAAOATsing1.43Å1.34Å
CAAHAAsing1.09Å1.10Å
CAAHAAAsing1.09Å1.10Å
CAAHAABsing1.09Å1.10Å
CABCAYsing1.51Å1.50Å
CABHABsing1.09Å1.10Å
CABHABAsing1.09Å1.10Å
CABHABBsing1.09Å1.10Å
NACHNACsing0.97Å1.00Å
NACHNAAsing0.97Å1.00Å
NADHNADsing0.97Å1.00Å
NADHNABsing0.97Å1.00Å
OAECAVdoub1.21Å1.22Å
OAFCAVsing1.34Å1.23Å
CAGCAHdoub1.38Å1.41ÅAromatic
CAGCAZsing1.39Å1.41ÅAromatic
CAGHAGsing1.08Å1.08Å
CAHCBCsing1.39Å1.42ÅAromatic
CAHHAHsing1.08Å1.08Å
CAINAQdoub1.31Å1.35ÅAromatic
CAICBAsing1.39Å1.42ÅAromatic
CAIHAIsing1.08Å1.08Å
CAJCAZdoub1.39Å1.41ÅAromatic
CAJCBBsing1.38Å1.42ÅAromatic
CAJHAJsing1.08Å1.08Å
CAKCALsing1.53Å1.56Å
CAKCAMsing1.53Å1.56Å
CAKHAKsing1.09Å1.10Å
CAKHAKAsing1.09Å1.10Å
CALCANsing1.53Å1.55Å
CALHALsing1.09Å1.10Å
CALHALAsing1.09Å1.10Å
CAMCAOsing1.53Å1.55Å
CAMHAMsing1.09Å1.10Å
CAMHAMAsing1.09Å1.10Å
CANOAUsing1.43Å1.35Å
CANHANsing1.09Å1.10Å
CANHANAsing1.09Å1.10Å
CAOCAVsing1.51Å1.45Å
CAOHAOsing1.09Å1.10Å
CAOHAOAsing1.09Å1.10Å
CAPCBAsing1.51Å1.50Å
CAPCBBsing1.51Å1.50Å
CAPHAPsing1.09Å1.10Å
CAPHAPAsing1.09Å1.10Å
OATCBCsing1.36Å1.28Å
OAUCAZsing1.36Å1.28Å
CAYCBAdoub1.37Å1.43ÅAromatic
CBBCBCdoub1.39Å1.42ÅAromatic
OAFH27sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2N1C6122.3°121.3°
N1C2N3119.3°122.9°
N1C2NAC121.1°118.6°
N1C6C5120.4°118.3°
N1C6NAD113.7°120.9°
N3C2NAC119.6°118.5°
C2N3C4121.2°120.5°
C2NACHNAC109.5°120.0°
C2NACHNAA109.5°120.1°
N3C4C5122.0°118.5°
N3C4NAQ116.8°121.8°
C5C4NAQ121.2°119.8°
C4C5C6114.7°118.5°
C4C5CAY117.6°119.3°
C4NAQCAI122.0°121.2°
C6C5CAY127.6°122.2°
C5C6NAD125.9°120.9°
C5CAYCAB120.6°121.0°
C5CAYCBA118.9°118.0°
C6NADHNAD109.5°120.0°
C6NADHNAB109.5°120.0°
OATCAAHAA109.5°109.4°
OATCAAHAAA109.5°109.4°
OATCAAHAAB109.5°109.5°
CAAOATCBC132.3°117.0°
HAACAAHAAA109.4°109.5°
HAACAAHAAB109.5°109.5°
HAAACAAHAAB109.5°109.5°
CAYCABHAB109.5°109.5°
CAYCABHABA109.5°109.5°
CAYCABHABB109.5°109.5°
CABCAYCBA120.4°121.0°
HABCABHABA109.5°109.5°
HABCABHABB109.5°109.4°
HABACABHABB109.5°109.4°
HNACNACHNAA109.4°119.9°
HNADNADHNAB109.5°120.0°
OAECAVOAF117.6°120.0°
OAECAVCAO120.9°120.0°
OAFCAVCAO121.5°120.0°
CAVOAFH27109.5°117.0°
CAHCAGCAZ121.1°120.0°
CAHCAGHAG119.4°120.0°
CAGCAHCBC121.0°120.0°
CAGCAHHAH119.5°120.0°
CAZCAGHAG119.5°120.0°
CAGCAZCAJ118.0°120.0°
CAGCAZOAU116.7°120.0°
CBCCAHHAH119.5°120.0°
CAHCBCOAT122.8°120.0°
CAHCBCCBB118.8°120.0°
NAQCAICBA121.0°121.8°
NAQCAIHAI119.5°119.1°
CBACAIHAI119.5°119.2°
CAICBACAP119.3°120.0°
CAICBACAY117.7°119.9°
CAZCAJCBB121.8°120.0°
CAZCAJHAJ119.1°120.0°
CAJCAZOAU125.3°120.0°
CBBCAJHAJ119.1°120.0°
CAJCBBCAP118.5°120.0°
CAJCBBCBC119.2°120.0°
CALCAKCAM113.9°109.5°
CALCAKHAK108.0°109.4°
CALCAKHAKA108.0°109.5°
CAKCALCAN113.1°109.5°
CAKCALHAL108.3°109.5°
CAKCALHALA108.3°109.5°
CAMCAKHAK108.0°109.5°
CAMCAKHAKA108.0°109.5°
CAKCAMCAO112.2°109.5°
CAKCAMHAM108.6°109.4°
CAKCAMHAMA108.6°109.5°
HAKCAKHAKA110.9°109.5°
CANCALHAL108.3°109.4°
CANCALHALA108.3°109.5°
CALCANOAU109.9°109.5°
CALCANHAN109.3°109.5°
CALCANHANA109.3°109.5°
HALCALHALA110.7°109.5°
CAOCAMHAM108.6°109.5°
CAOCAMHAMA108.6°109.5°
CAMCAOCAV113.5°109.4°
CAMCAOHAO108.1°109.4°
CAMCAOHAOA108.1°109.5°
HAMCAMHAMA110.4°109.5°
OAUCANHAN109.3°109.4°
OAUCANHANA109.3°109.5°
CANOAUCAZ131.6°117.0°
HANCANHANA109.6°109.5°
CAVCAOHAO108.2°109.5°
CAVCAOHAOA108.1°109.5°
HAOCAOHAOA110.8°109.5°
CBACAPCBB116.6°109.5°
CBACAPHAP107.2°109.4°
CBACAPHAPA107.2°109.4°
CAPCBACAY122.9°120.0°
CBBCAPHAP107.2°109.5°
CBBCAPHAPA107.2°109.5°
CAPCBBCBC122.3°120.0°
HAPCAPHAPA111.7°109.5°
OATCBCCBB118.5°120.1°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N1C2N3NAC179.1°180.0°
N1C2N3C42.1°0.0°
C2N1C6C50.7°0.1°
C2N1C6NAD178.8°180.0°
N1C2NACHNAC0.0°0.0°
N1C2NACHNAA120.0°179.9°
C6N1C2N31.7°0.1°
C6N1C2NAC177.4°179.9°
N1C6C5C42.7°0.0°
N1C6C5NAD177.8°179.9°
N1C6C5CAY176.2°179.9°
N1C6NADHNAD0.0°138.7°
N1C6NADHNAB120.0°41.3°
C2N3C4C50.0°0.1°
C2N3C4NAQ178.7°179.9°
N3C2NACHNAC179.1°180.0°
N3C2NACHNAA60.9°0.1°
NACC2N3C4177.0°180.0°
C2NACHNACHNAA120.0°179.9°
N3C4C5NAQ178.6°180.0°
N3C4C5C62.3°0.1°
N3C4C5CAY176.6°180.0°
N3C4NAQCAI173.3°180.0°
C4C5C6CAY178.8°179.9°
C4C5C6NAD179.6°179.9°
C4C5CAYCAB171.7°180.0°
C5C4NAQCAI5.4°0.0°
C4C5CAYCBA7.8°0.0°
NAQC4C5C6179.0°179.9°
NAQC4C5CAY2.0°0.0°
C4NAQCAICBA1.4°0.0°
C4NAQCAIHAI178.6°180.0°
C6C5CAYCAB9.5°0.0°
C5C6NADHNAD177.9°41.2°
C5C6NADHNAB57.9°138.8°
C6C5CAYCBA171.0°180.0°
CAYC5C6NAD1.6°0.0°
C5CAYCABCBA179.4°180.0°
C5CAYCABHAB90.3°82.8°
C5CAYCABHABA149.7°157.2°
C5CAYCABHABB29.7°37.1°
C5CAYCBACAI14.1°0.0°
C5CAYCBACAP164.0°180.0°
C6NADHNADHNAB120.0°180.0°
OATCAAHAAHAAA120.0°119.9°
OATCAAHAAHAAB120.0°120.0°
OATCAAHAAAHAAB120.0°120.0°
CAAOATCBCCAH3.2°0.0°
CAAOATCBCCBB176.8°180.0°
HAACAAHAAAHAAB120.0°120.1°
HAACAAOATCBC180.0°180.0°
HAAACAAOATCBC60.0°60.0°
HAABCAAOATCBC60.0°60.0°
CAYCABHABHABA120.0°120.1°
CAYCABHABHABB120.0°120.0°
CAYCABHABAHABB120.0°120.0°
CABCAYCBACAI165.4°180.0°
CABCAYCBACAP16.5°0.0°
HABCABHABAHABB120.0°119.9°
HABCABCAYCBA90.3°97.2°
HABACABCAYCBA29.7°22.8°
HABBCABCAYCBA149.7°142.9°
OAECAVOAFCAO178.9°180.0°
OAECAVCAOCAM119.8°0.0°
OAECAVCAOHAO0.2°120.0°
OAECAVCAOHAOA120.2°120.0°
OAECAVOAFH270.0°0.0°
OAFCAVCAOCAM61.3°180.0°
OAFCAVCAOHAO178.7°60.0°
OAFCAVCAOHAOA58.7°60.0°
CAHCAGCAZHAG180.0°179.7°
CAGCAHCBCHAH180.0°180.0°
CAHCAGCAZCAJ2.7°0.0°
CAGCAHCBCOAT178.2°180.0°
CAHCAGCAZOAU175.5°180.0°
CAGCAHCBCCBB1.8°0.0°
CAZCAGCAHCBC0.1°0.0°
CAZCAGCAHHAH179.9°180.0°
CAGCAZCAJOAU178.0°180.0°
CAGCAZCAJCBB3.9°0.0°
CAGCAZCAJHAJ176.1°180.0°
CAGCAZOAUCAN177.7°0.1°
HAGCAGCAHCBC179.9°179.8°
HAGCAGCAHHAH0.1°0.2°
HAGCAGCAZCAJ177.3°179.7°
HAGCAGCAZOAU4.5°0.3°
CAHCBCCBBCAJ0.8°0.0°
CAHCBCCBBCAP179.4°180.0°
CAHCBCOATCBB180.0°180.0°
HAHCAHCBCOAT1.8°0.0°
HAHCAHCBCCBB178.2°180.0°
NAQCAICBAHAI180.0°180.0°
NAQCAICBACAP167.0°180.0°
NAQCAICBACAY11.2°0.0°
CAICBACAPCAY178.1°180.0°
CAICBACAPCBB29.3°95.0°
CAICBACAPHAP90.7°25.1°
CAICBACAPHAPA149.3°145.0°
HAICAICBACAP12.9°0.0°
HAICAICBACAY168.9°180.0°
CAZCAJCBBHAJ180.0°180.0°
CAJCAZOAUCAN0.3°180.0°
CAZCAJCBBCAP177.7°180.0°
CAZCAJCBBCBC2.1°0.0°
CAJCBBCAPCBA52.8°95.0°
CAJCBBCAPCBC179.8°179.9°
CAJCBBCAPHAP172.8°145.0°
CAJCBBCAPHAPA67.1°24.9°
CAJCBBCBCOAT179.3°180.0°
CBBCAJCAZOAU174.2°180.0°
HAJCAJCBBCAP2.3°0.1°
HAJCAJCAZOAU5.8°0.0°
HAJCAJCBBCBC177.9°180.0°
CALCAKCAMHAK120.0°120.0°
CALCAKCAMHAKA120.0°120.0°
CALCAKHAKHAKA118.2°120.0°
CAKCALCANHAL120.0°120.0°
CAKCALCANHALA120.0°120.0°
CAKCALHALHALA118.5°120.0°
CALCAKCAMCAO176.1°NaN°
CALCAKCAMHAM56.1°60.0°
CALCAKCAMHAMA63.9°60.0°
CAKCALCANOAU172.9°179.9°
CAKCALCANHAN52.9°60.0°
CAKCALCANHANA67.1°60.0°
CAMCAKHAKHAKA118.2°120.0°
CAMCAKCALCAN171.1°179.9°
CAMCAKCALHAL68.9°60.0°
CAMCAKCALHALA51.1°60.0°
CAKCAMCAOHAM120.0°119.9°
CAKCAMCAOHAMA120.0°120.0°
CAKCAMHAMHAMA118.9°120.0°
CAKCAMCAOCAV177.1°180.0°
CAKCAMCAOHAO62.9°60.0°
CAKCAMCAOHAOA57.1°59.9°
HAKCAKCALCAN69.0°60.0°
HAKCAKCALHAL51.0°60.0°
HAKCAKCALHALA171.1°180.0°
HAKCAKCAMCAO63.9°60.0°
HAKCAKCAMHAM176.1°180.0°
HAKCAKCAMHAMA56.1°60.0°
HAKACAKCALCAN51.1°60.0°
HAKACAKCALHAL171.1°180.0°
HAKACAKCALHALA68.9°60.0°
HAKACAKCAMCAO56.1°60.0°
HAKACAKCAMHAM63.9°60.0°
HAKACAKCAMHAMA176.1°180.0°
CANCALHALHALA118.5°120.0°
CALCANOAUHAN120.0°120.0°
CALCANOAUHANA120.0°120.0°
CALCANHANHANA119.8°120.0°
CALCANOAUCAZ166.8°180.0°
HALCALCANOAU67.1°60.1°
HALCALCANHAN172.9°180.0°
HALCALCANHANA52.9°60.0°
HALACALCANOAU52.9°59.9°
HALACALCANHAN67.1°60.0°
HALACALCANHANA172.9°NaN°
CAOCAMHAMHAMA118.9°120.0°
CAMCAOCAVHAO120.0°119.9°
CAMCAOCAVHAOA120.0°120.0°
CAMCAOHAOHAOA118.3°120.0°
HAMCAMCAOCAV57.1°60.1°
HAMCAMCAOHAO177.1°179.9°
HAMCAMCAOHAOA62.9°60.0°
HAMACAMCAOCAV62.9°60.0°
HAMACAMCAOHAO57.1°60.0°
HAMACAMCAOHAOA177.1°180.0°
OAUCANHANHANA119.8°120.0°
HANCANOAUCAZ46.8°60.0°
HANACANOAUCAZ73.2°60.0°
CAVCAOHAOHAOA118.3°120.1°
CAOCAVOAFH27178.9°180.0°
CBACAPCBBHAP120.0°120.0°
CBACAPCBBHAPA120.0°120.0°
CBACAPHAPHAPA117.1°119.9°
CBACAPCBBCBC127.0°85.0°
CBBCAPHAPHAPA117.1°120.1°
CAPCBBCBCOAT0.6°0.1°
CBBCAPCBACAY148.8°85.0°
HAPCAPCBACAY91.2°155.0°
HAPCAPCBBCBC7.0°34.9°
HAPACAPCBACAY28.8°35.0°
HAPACAPCBBCBC113.0°155.0°

251174

PDB entries from 2026-03-25

PDB statisticsPDBj update infoContact PDBjnumon