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D2B

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C6N1doub1.33Å1.36ÅAromatic
N1C2sing1.33Å1.33ÅAromatic
N3C2doub1.32Å1.38ÅAromatic
C2NADsing1.38Å1.33Å
C4N3sing1.33Å1.32ÅAromatic
C5C4doub1.40Å1.38ÅAromatic
OAPC4sing1.34Å1.37ÅAromatic
CASC5sing1.47Å1.42ÅAromatic
C5C6sing1.40Å1.42ÅAromatic
NAEC6sing1.38Å1.34Å
CABOAOsing1.43Å1.50Å
CABHABsing1.09Å1.10Å
CABHABAsing1.09Å1.10Å
CABHABBsing1.09Å1.10Å
CACCAYsing1.53Å1.57Å
CACHACsing1.09Å1.10Å
CACHACAsing1.09Å1.10Å
CACHACBsing1.09Å1.10Å
NADHNADsing0.97Å1.00Å
NADHNAAsing0.97Å1.00Å
NAEHNAEsing0.97Å1.00Å
NAEHNABsing0.97Å1.00Å
CAQCAFdoub1.34Å1.42Å
CAFCASsing1.47Å1.42Å
CAFHAFsing1.08Å1.08Å
CAICAGdoub1.38Å1.40ÅAromatic
CAGCAHsing1.38Å1.40ÅAromatic
CAGHAGsing1.08Å1.08Å
CAJCAHdoub1.38Å1.40ÅAromatic
CAHHAHsing1.08Å1.08Å
CAUCAIsing1.38Å1.42ÅAromatic
CAIHAIsing1.08Å1.08Å
CAVCAJsing1.40Å1.40ÅAromatic
CAJHAJsing1.08Å1.08Å
CASCAKdoub1.36Å1.35ÅAromatic
CAKOAPsing1.35Å1.43ÅAromatic
CAKHAKsing1.08Å1.08Å
CALCAYsing1.53Å1.48Å
CALHALsing1.09Å1.10Å
CALHALAsing1.09Å1.10Å
CALHALBsing1.09Å1.10Å
OAOCAUsing1.36Å1.39Å
CAYCAQsing1.51Å1.56Å
CAQCAVsing1.47Å1.40Å
CAUCAVdoub1.40Å1.41ÅAromatic
CAYHAYsing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C6N1C2117.9°120.8°
N1C6C5121.0°118.5°
N1C6NAE114.0°120.8°
N1C2N3124.5°122.5°
N1C2NAD119.1°118.7°
N3C2NAD116.4°118.8°
C2N3C4115.8°120.7°
C2NADHNAD109.5°120.0°
C2NADHNAA109.4°120.0°
N3C4C5124.4°118.5°
N3C4OAP122.3°133.9°
C5C4OAP112.6°107.6°
C4C5CAS105.0°105.7°
C4C5C6115.2°119.0°
C4OAPCAK103.4°111.3°
CASC5C6138.9°135.2°
C5CASCAF124.2°127.2°
C5CASCAK107.7°105.7°
C5C6NAE124.7°120.8°
C6NAEHNAE109.5°120.0°
C6NAEHNAB109.5°120.0°
OAOCABHAB109.5°109.5°
OAOCABHABA109.5°109.5°
OAOCABHABB109.4°109.5°
CABOAOCAU120.1°117.0°
HABCABHABA109.5°109.4°
HABCABHABB109.5°109.5°
HABACABHABB109.5°109.5°
CAYCACHAC109.5°109.4°
CAYCACHACA109.4°109.5°
CAYCACHACB109.5°109.5°
CACCAYCAL116.8°109.5°
CACCAYCAQ115.3°109.4°
CACCAYHAY100.0°109.5°
HACCACHACA109.5°109.4°
HACCACHACB109.5°109.5°
HACACACHACB109.5°109.5°
HNADNADHNAA109.5°120.0°
HNAENAEHNAB109.4°120.0°
CAQCAFCAS124.9°120.0°
CAQCAFHAF117.5°120.0°
CAFCAQCAY124.3°120.0°
CAFCAQCAV130.2°120.0°
CASCAFHAF117.6°120.0°
CAFCASCAK127.7°127.1°
CAICAGCAH121.0°120.3°
CAICAGHAG119.5°119.8°
CAGCAICAU120.2°120.1°
CAGCAIHAI119.9°119.9°
CAHCAGHAG119.5°119.8°
CAGCAHCAJ119.0°120.3°
CAGCAHHAH120.5°119.8°
CAJCAHHAH120.5°119.9°
CAHCAJCAV120.6°119.9°
CAHCAJHAJ119.7°120.1°
CAUCAIHAI119.9°120.0°
CAICAUOAO121.5°120.1°
CAICAUCAV118.3°119.7°
CAVCAJHAJ119.7°120.1°
CAJCAVCAQ119.6°120.2°
CAJCAVCAU120.5°119.6°
CASCAKOAP110.5°109.7°
CASCAKHAK124.8°125.2°
OAPCAKHAK124.8°125.1°
CAYCALHAL109.5°109.5°
CAYCALHALA109.5°109.5°
CAYCALHALB109.5°109.5°
CALCAYCAQ111.8°109.4°
CALCAYHAY104.5°109.5°
HALCALHALA109.4°109.4°
HALCALHALB109.5°109.5°
HALACALHALB109.5°109.5°
OAOCAUCAV120.1°120.1°
CAYCAQCAV105.5°120.0°
CAQCAYHAY106.5°109.5°
CAQCAVCAU119.1°120.2°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C6N1C2N31.0°0.0°
C6N1C2NAD179.2°179.9°
N1C6C5C40.7°0.0°
N1C6C5CAS166.1°180.0°
N1C6C5NAE174.6°180.0°
N1C6NAEHNAE0.0°180.0°
N1C6NAEHNAB120.0°0.0°
N1C2N3NAD179.8°179.9°
N1C2N3C47.5°0.0°
C2N1C6C55.1°0.0°
C2N1C6NAE179.8°180.0°
N1C2NADHNAD0.0°0.0°
N1C2NADHNAA120.0°180.0°
C2N3C4C512.4°0.0°
C2N3C4OAP178.0°179.9°
N3C2NADHNAD179.8°180.0°
N3C2NADHNAA59.8°0.0°
NADC2N3C4172.3°180.0°
C2NADHNADHNAA120.0°180.0°
N3C4C5OAP170.5°180.0°
N3C4C5CAS179.7°180.0°
N3C4C5C68.6°0.0°
N3C4OAPCAK178.9°180.0°
C4C5CASC6167.7°180.0°
C4C5C6NAE175.3°180.0°
C4C5CASCAF178.6°179.9°
C4C5CASCAK7.2°0.0°
C5C4OAPCAK8.2°0.1°
OAPC4C5CAS9.8°0.0°
OAPC4C5C6179.1°180.0°
C4OAPCAKCAS3.3°0.1°
C4OAPCAKHAK176.7°180.0°
CASC5C6NAE8.4°0.0°
C5CASCAFCAQ161.5°163.1°
C5CASCAFCAK172.9°179.9°
C5CASCAFHAF18.5°16.9°
C5CASCAKOAP2.5°0.1°
C5CASCAKHAK177.5°180.0°
C5C6NAEHNAE174.9°0.0°
C5C6NAEHNAB65.1°180.0°
C6C5CASCAF11.0°0.1°
C6C5CASCAK174.9°180.0°
C6NAEHNAEHNAB120.0°180.0°
OAOCABHABHABA120.0°120.0°
OAOCABHABHABB120.0°120.0°
OAOCABHABAHABB120.0°120.0°
CABOAOCAUCAI30.3°0.0°
CABOAOCAUCAV153.7°179.5°
HABCABHABAHABB120.0°120.0°
HABCABOAOCAU180.0°180.0°
HABACABOAOCAU60.0°60.0°
HABBCABOAOCAU60.0°60.0°
CAYCACHACHACA120.0°119.9°
CAYCACHACHACB120.0°120.0°
CAYCACHACAHACB120.0°120.0°
CACCAYCAQCAF94.3°120.0°
CACCAYCALCAQ135.8°119.9°
CACCAYCALHAY109.3°120.1°
CACCAYCALHAL180.0°60.0°
CACCAYCALHALA60.0°179.9°
CACCAYCALHALB60.0°60.0°
CACCAYCAQHAY109.9°120.0°
CACCAYCAQCAV82.8°60.0°
HACCACHACAHACB120.0°120.1°
HACCACCAYCAL180.0°60.0°
HACCACCAYCAQ45.7°180.0°
HACCACCAYHAY68.0°60.0°
HACACACCAYCAL60.0°180.0°
HACACACCAYCAQ165.7°60.1°
HACACACCAYHAY52.0°59.9°
HACBCACCAYCAL60.0°60.0°
HACBCACCAYCAQ74.3°60.0°
HACBCACCAYHAY172.0°180.0°
CAQCAFCASHAF180.0°180.0°
CAFCAQCAVCAJ107.5°103.9°
CAQCAFCASCAK25.6°16.8°
CAFCAQCAYCAL42.2°120.0°
CAFCAQCAYCAV177.1°180.0°
CAFCAQCAVCAU81.9°75.8°
CAFCAQCAYHAY155.8°0.0°
CAFCASCAKOAP176.3°180.0°
CAFCASCAKHAK3.7°0.1°
CASCAFCAQCAY175.1°173.6°
CASCAFCAQCAV8.5°6.4°
HAFCAFCASCAK154.4°163.2°
HAFCAFCAQCAY4.9°6.4°
HAFCAFCAQCAV171.5°173.6°
CAICAGCAHHAG180.0°179.8°
CAICAGCAHCAJ2.3°0.2°
CAICAGCAHHAH177.7°179.7°
CAGCAICAUHAI180.0°180.0°
CAGCAICAUOAO180.0°180.0°
CAGCAICAUCAV3.9°0.5°
CAGCAHCAJHAH180.0°179.9°
CAHCAGCAICAU0.3°0.1°
CAHCAGCAIHAI179.7°180.0°
CAGCAHCAJCAV0.1°0.1°
CAGCAHCAJHAJ179.9°180.0°
HAGCAGCAHCAJ177.7°179.9°
HAGCAGCAHHAH2.3°0.0°
HAGCAGCAICAU179.6°179.7°
HAGCAGCAIHAI0.3°0.3°
CAHCAJCAVHAJ180.0°179.9°
CAHCAJCAVCAQ174.9°179.7°
CAHCAJCAVCAU4.5°0.6°
HAHCAHCAJCAV179.9°180.0°
HAHCAHCAJHAJ0.2°0.1°
CAICAUCAVCAJ6.3°0.8°
CAICAUOAOCAV176.0°179.5°
CAICAUCAVCAQ176.8°179.5°
HAICAICAUOAO0.0°0.0°
HAICAICAUCAV176.1°179.5°
CAJCAVCAUOAO177.6°179.8°
CAJCAVCAQCAY75.6°76.1°
CAJCAVCAQCAU170.6°179.7°
HAJCAJCAVCAQ5.0°0.2°
HAJCAJCAVCAU175.5°179.5°
CASCAKOAPHAK180.0°179.9°
CAYCALHALHALA120.0°120.0°
CAYCALHALHALB120.0°120.0°
CAYCALHALAHALB120.0°120.0°
CALCAYCAQHAY113.6°120.0°
CALCAYCAQCAV140.7°60.0°
HALCALHALAHALB120.0°119.9°
HALCALCAYCAQ44.2°60.0°
HALCALCAYHAY70.7°179.9°
HALACALCAYCAQ75.8°60.0°
HALACALCAYHAY169.4°60.0°
HALBCALCAYCAQ164.2°180.0°
HALBCALCAYHAY49.3°60.0°
OAOCAUCAVCAQ7.1°0.0°
CAYCAQCAVCAU95.0°104.1°
CAVCAQCAYHAY27.1°180.0°

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PDB entries from 2024-09-11

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