D0C
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C | O | doub | 1.21Å | 1.24Å | |
C | CA | sing | 1.51Å | 1.61Å | |
N | CA | sing | 1.47Å | 1.51Å | |
CA | CB | sing | 1.53Å | 1.50Å | |
CB | CG | sing | 1.51Å | 1.49Å | |
CD1 | CG | doub | 1.38Å | 1.37Å | Aromatic |
CD1 | CE1 | sing | 1.38Å | 1.43Å | Aromatic |
CG | CD2 | sing | 1.38Å | 1.38Å | Aromatic |
CE1 | CZ | doub | 1.38Å | 1.32Å | Aromatic |
CD2 | CE2 | doub | 1.38Å | 1.40Å | Aromatic |
CZ | CE2 | sing | 1.38Å | 1.38Å | Aromatic |
CZ | CL | sing | 1.74Å | 1.64Å | |
C | OXT | sing | 1.34Å | 1.37Å | |
N | H | sing | 1.01Å | 1.00Å | |
N | H2 | sing | 1.01Å | 1.00Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
CB | HB2 | sing | 1.09Å | 1.10Å | |
CB | HB3 | sing | 1.09Å | 1.10Å | |
CD1 | HD1 | sing | 1.08Å | 1.08Å | |
CD2 | HD2 | sing | 1.08Å | 1.08Å | |
CE1 | HE1 | sing | 1.08Å | 1.08Å | |
CE2 | HE2 | sing | 1.08Å | 1.08Å | |
OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O | C | CA | 118.7° | 120.0° |
O | C | OXT | 124.2° | 120.0° |
C | CA | N | 109.2° | 109.5° |
C | CA | CB | 97.8° | 109.4° |
CA | C | OXT | 116.8° | 120.0° |
C | CA | HA | 112.1° | 109.5° |
N | CA | CB | 109.2° | 109.4° |
CA | N | H | 109.5° | 111.0° |
CA | N | H2 | 109.5° | 111.0° |
N | CA | HA | 113.6° | 109.5° |
CA | CB | CG | 108.5° | 109.4° |
CB | CA | HA | 113.8° | 109.5° |
CA | CB | HB2 | 109.7° | 109.5° |
CA | CB | HB3 | 109.7° | 109.5° |
CB | CG | CD1 | 121.1° | 120.0° |
CB | CG | CD2 | 118.7° | 120.0° |
CG | CB | HB2 | 109.7° | 109.5° |
CG | CB | HB3 | 109.7° | 109.5° |
CG | CD1 | CE1 | 121.1° | 120.0° |
CD1 | CG | CD2 | 120.2° | 120.0° |
CG | CD1 | HD1 | 119.4° | 120.0° |
CD1 | CE1 | CZ | 117.1° | 120.0° |
CE1 | CD1 | HD1 | 119.4° | 120.0° |
CD1 | CE1 | HE1 | 121.4° | 120.0° |
CG | CD2 | CE2 | 117.9° | 120.0° |
CG | CD2 | HD2 | 121.1° | 120.0° |
CE1 | CZ | CE2 | 123.1° | 119.9° |
CE1 | CZ | CL | 117.7° | 120.0° |
CZ | CE1 | HE1 | 121.5° | 120.0° |
CD2 | CE2 | CZ | 120.5° | 120.0° |
CE2 | CD2 | HD2 | 121.0° | 120.0° |
CD2 | CE2 | HE2 | 119.8° | 120.1° |
CE2 | CZ | CL | 119.2° | 120.0° |
CZ | CE2 | HE2 | 119.7° | 120.0° |
C | OXT | HXT | 109.5° | 117.0° |
H | N | H2 | 109.4° | 111.0° |
HB2 | CB | HB3 | 109.5° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O | C | CA | OXT | 173.7° | 179.9° |
O | C | CA | N | 137.0° | 20.0° |
O | C | CA | CB | 109.5° | 99.9° |
O | C | CA | HA | 10.2° | 140.0° |
O | C | OXT | HXT | 0.0° | 0.1° |
C | CA | N | CB | 105.8° | 120.0° |
C | CA | N | HA | 125.9° | 120.0° |
C | CA | CB | HA | 118.4° | 120.0° |
C | CA | CB | CG | 80.6° | 175.0° |
C | CA | N | H | 180.0° | 176.1° |
C | CA | N | H2 | 60.0° | 60.0° |
C | CA | CB | HB2 | 39.2° | 55.0° |
C | CA | CB | HB3 | 159.5° | 65.0° |
CA | C | OXT | HXT | 173.3° | 180.0° |
N | CA | CB | HA | 128.1° | 120.0° |
N | CA | CB | CG | 165.9° | 65.0° |
N | CA | C | OXT | 49.3° | 160.1° |
CA | N | H | H2 | 120.0° | 124.0° |
N | CA | CB | HB2 | 74.2° | 175.0° |
N | CA | CB | HB3 | 46.0° | 54.9° |
CA | CB | CG | HB2 | 119.8° | 120.0° |
CA | CB | CG | HB3 | 119.9° | 120.0° |
CA | CB | CG | CD1 | 105.4° | 89.8° |
CA | CB | CG | CD2 | 75.3° | 90.0° |
CB | CA | C | OXT | 64.2° | 80.0° |
CB | CA | N | H | 74.2° | 64.0° |
CB | CA | N | H2 | 45.8° | 60.0° |
CA | CB | HB2 | HB3 | 120.4° | 120.0° |
CB | CG | CD1 | CD2 | 179.2° | 179.8° |
CB | CG | CD1 | CE1 | 176.6° | 180.0° |
CB | CG | CD2 | CE2 | 178.0° | 180.0° |
CG | CB | CA | HA | 37.8° | 55.0° |
CG | CB | HB2 | HB3 | 120.4° | 120.0° |
CB | CG | CD1 | HD1 | 3.4° | 0.0° |
CB | CG | CD2 | HD2 | 2.0° | 0.1° |
CG | CD1 | CE1 | HD1 | 180.0° | 180.0° |
CG | CD1 | CE1 | CZ | 1.9° | 0.0° |
CD1 | CG | CD2 | CE2 | 1.2° | 0.2° |
CD1 | CG | CB | HB2 | 14.4° | 150.2° |
CD1 | CG | CB | HB3 | 134.7° | 30.2° |
CD1 | CG | CD2 | HD2 | 178.8° | 179.8° |
CG | CD1 | CE1 | HE1 | 178.1° | 180.0° |
CE1 | CD1 | CG | CD2 | 2.6° | 0.2° |
CD1 | CE1 | CZ | HE1 | 180.0° | 179.9° |
CD1 | CE1 | CZ | CE2 | 0.2° | 0.3° |
CD1 | CE1 | CZ | CL | 180.0° | 180.0° |
CG | CD2 | CE2 | HD2 | 180.0° | 179.9° |
CG | CD2 | CE2 | CZ | 0.8° | 0.1° |
CD2 | CG | CB | HB2 | 164.8° | 29.9° |
CD2 | CG | CB | HB3 | 44.5° | 150.0° |
CD2 | CG | CD1 | HD1 | 177.4° | 179.8° |
CG | CD2 | CE2 | HE2 | 179.2° | 180.0° |
CE1 | CZ | CE2 | CD2 | 1.5° | 0.3° |
CE1 | CZ | CE2 | CL | 179.8° | 179.8° |
CZ | CE1 | CD1 | HD1 | 178.1° | 180.0° |
CE1 | CZ | CE2 | HE2 | 178.5° | 179.8° |
CD2 | CE2 | CZ | HE2 | 180.0° | 179.9° |
CD2 | CE2 | CZ | CL | 178.6° | 179.9° |
CZ | CE2 | CD2 | HD2 | 179.2° | 180.0° |
CE2 | CZ | CE1 | HE1 | 179.8° | 179.8° |
CL | CZ | CE1 | HE1 | 0.0° | 0.0° |
CL | CZ | CE2 | HE2 | 1.4° | 0.0° |
OXT | C | CA | HA | 176.1° | 40.0° |
H | N | CA | HA | 54.1° | 56.0° |
H2 | N | CA | HA | 174.1° | 180.0° |
HA | CA | CB | HB2 | 157.6° | 65.0° |
HA | CA | CB | HB3 | 82.1° | 175.0° |
HD1 | CD1 | CE1 | HE1 | 1.9° | 0.0° |
HD2 | CD2 | CE2 | HE2 | 0.8° | 0.1° |