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SummaryGeometryRelated PDB entries

CZ5

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
CBCCBBsing1.53Å1.53Å
CBBNAZsing1.47Å1.47Å
NAZCAYsing1.35Å1.35Å
OBACAYdoub1.22Å1.23Å
CAYNAXsing1.35Å1.35Å
NAXCAPsing1.39Å1.35Å
CAWCAVdoub1.35Å1.34ÅAromatic
CAWNASsing1.36Å1.35ÅAromatic
CAVCAUsing1.40Å1.33ÅAromatic
CAQCAPdoub1.39Å1.42ÅAromatic
CAQCARsing1.39Å1.41ÅAromatic
CAPNAOsing1.33Å1.35ÅAromatic
NASCARsing1.40Å1.36Å
NASNATsing1.40Å1.35ÅAromatic
CAUNATdoub1.31Å1.34ÅAromatic
CARCAMdoub1.41Å1.42ÅAromatic
NAOCANdoub1.32Å1.40ÅAromatic
CAMCANsing1.40Å1.40ÅAromatic
CAMCAKsing1.47Å1.42Å
OALCAKdoub1.22Å1.23Å
CAKNAHsing1.35Å1.36Å
NAHCAEsing1.40Å1.36Å
CAECAFdoub1.39Å1.41ÅAromatic
CAECADsing1.39Å1.40ÅAromatic
CAFCAAsing1.39Å1.40ÅAromatic
CADNACdoub1.32Å1.41ÅAromatic
CAACABdoub1.38Å1.38ÅAromatic
NACCABsing1.32Å1.41ÅAromatic
CAFH1sing1.08Å1.08Å
CAAH2sing1.08Å1.08Å
CABH3sing1.08Å1.08Å
CADH4sing1.08Å1.08Å
NAHH5sing0.97Å1.00Å
CANH6sing1.08Å1.08Å
NAXH7sing0.97Å1.00Å
NAZH8sing0.97Å1.00Å
CBBH9sing1.09Å1.10Å
CBBH10sing1.09Å1.10Å
CBCH11sing1.09Å1.10Å
CBCH12sing1.09Å1.10Å
CBCH13sing1.09Å1.10Å
CAQH14sing1.08Å1.08Å
CAUH15sing1.08Å1.08Å
CAVH16sing1.08Å1.08Å
CAWH17sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
CBCCBBNAZ110.4°109.5°
CBCCBBH9109.2°109.5°
CBCCBBH10109.2°109.5°
CBBCBCH11109.5°109.5°
CBBCBCH12109.4°109.5°
CBBCBCH13109.5°109.5°
CBBNAZCAY123.4°120.0°
CBBNAZH8118.3°120.0°
NAZCBBH9109.2°109.5°
NAZCBBH10109.2°109.5°
NAZCAYOBA120.9°120.0°
NAZCAYNAX114.5°120.0°
CAYNAZH8118.3°120.0°
OBACAYNAX124.4°120.0°
CAYNAXCAP126.1°120.0°
CAYNAXH7117.0°120.0°
NAXCAPCAQ128.6°119.5°
NAXCAPNAO113.0°119.5°
CAPNAXH7117.0°120.0°
CAVCAWNAS109.1°107.6°
CAWCAVCAU108.1°108.0°
CAWCAVH16126.0°126.1°
CAVCAWH17125.4°126.2°
CAWNASCAR129.2°126.1°
CAWNASNAT106.0°107.8°
NASCAWH17125.5°126.2°
CAVCAUNAT107.8°108.3°
CAVCAUH15126.1°125.9°
CAUCAVH16126.0°125.9°
CAPCAQCAR122.2°119.2°
CAQCAPNAO118.4°121.0°
CAPCAQH14118.9°120.4°
CAQCARNAS118.5°120.9°
CAQCARCAM118.5°118.3°
CARCAQH14118.9°120.5°
CAPNAOCAN120.9°122.0°
CARNASNAT124.7°126.1°
NASCARCAM122.8°120.9°
NASNATCAU109.0°108.3°
NATCAUH15126.1°125.8°
CARCAMCAN117.9°118.9°
CARCAMCAK124.3°120.6°
NAOCANCAM122.0°120.7°
NAOCANH6119.0°119.7°
CANCAMCAK117.6°120.5°
CAMCANH6119.0°119.6°
CAMCAKOAL116.9°120.0°
CAMCAKNAH118.0°120.0°
OALCAKNAH124.7°120.0°
CAKNAHCAE124.4°120.0°
CAKNAHH5117.8°120.0°
NAHCAECAF125.4°120.4°
NAHCAECAD117.3°120.6°
CAENAHH5117.8°120.0°
CAFCAECAD117.2°119.0°
CAECAFCAA121.7°118.3°
CAECAFH1119.2°120.8°
CAECADNAC121.5°120.7°
CAECADH4119.3°119.6°
CAFCAACAB120.6°119.2°
CAACAFH1119.1°120.8°
CAFCAAH2119.7°120.3°
CADNACCAB119.8°121.8°
NACCADH4119.3°119.7°
CAACABNAC119.2°121.0°
CABCAAH2119.7°120.5°
CAACABH3120.4°119.5°
NACCABH3120.4°119.5°
H9CBBH10109.4°109.5°
H11CBCH12109.5°109.4°
H11CBCH13109.5°109.5°
H12CBCH13109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
CBCCBBNAZH9120.2°120.0°
CBCCBBNAZH10120.2°120.0°
CBCCBBNAZCAY147.3°180.0°
CBCCBBNAZH832.7°0.0°
CBCCBBH9H10119.6°120.0°
CBBCBCH11H12120.0°120.0°
CBBCBCH11H13120.0°120.0°
CBBCBCH12H13120.0°120.0°
CBBNAZCAYH8180.0°180.0°
CBBNAZCAYOBA0.0°0.0°
CBBNAZCAYNAX176.8°180.0°
NAZCBBH9H10119.5°120.0°
NAZCBBCBCH11180.0°60.0°
NAZCBBCBCH1260.0°60.0°
NAZCBBCBCH1360.0°180.0°
NAZCAYOBANAX176.6°179.9°
NAZCAYNAXCAP177.6°174.9°
NAZCAYNAXH72.4°5.1°
CAYNAZCBBH992.6°60.0°
CAYNAZCBBH1027.1°60.0°
OBACAYNAXCAP0.8°5.2°
OBACAYNAXH7179.2°174.9°
OBACAYNAZH8180.0°180.0°
CAYNAXCAPH7180.0°179.9°
CAYNAXCAPCAQ16.7°174.9°
CAYNAXCAPNAO164.4°5.2°
NAXCAYNAZH83.1°0.0°
NAXCAPCAQNAO178.8°179.9°
NAXCAPCAQCAR178.8°179.8°
NAXCAPNAOCAN179.6°180.0°
NAXCAPCAQH141.2°0.1°
CAVCAWNASH17180.0°179.7°
CAWCAVCAUH16180.0°179.9°
CAVCAWNASCAR177.4°179.9°
CAVCAWNASNAT1.4°0.4°
CAWCAVCAUNAT0.6°0.2°
CAWCAVCAUH15179.4°179.7°
NASCAWCAVCAU0.5°0.4°
CAWNASCARCAQ35.5°4.0°
CAWNASCARNAT175.4°179.7°
CAWNASNATCAU1.8°0.3°
CAWNASCARCAM148.7°176.4°
NASCAWCAVH16179.5°179.8°
CAVCAUNATNAS1.5°0.0°
CAVCAUNATH15180.0°179.9°
CAUCAVCAWH17179.5°180.0°
CAPCAQCARH14180.0°179.9°
CAPCAQCARNAS177.6°180.0°
CAPCAQCARCAM1.6°0.4°
CAQCAPNAOCAN0.6°0.1°
CAQCAPNAXH7163.2°5.0°
CARCAQCAPNAO0.0°0.2°
CAQCARNASCAM175.8°179.6°
CAQCARNASNAT139.8°175.7°
CAQCARCAMCAN2.5°0.4°
CAQCARCAMCAK177.5°179.8°
CAPNAOCANCAM0.4°0.0°
CAPNAOCANH6179.6°180.0°
NAOCAPNAXH715.6°174.9°
NAOCAPCAQH14180.0°179.9°
CARNASNATCAU178.0°180.0°
NASCARCAMCAN178.3°180.0°
NASCARCAMCAK6.7°0.2°
NASCARCAQH142.4°0.1°
CARNASCAWH172.6°0.2°
NATNASCARCAM36.0°3.9°
NASNATCAUH15178.5°180.0°
NATNASCAWH17178.6°179.9°
NATCAUCAVH16179.4°179.9°
CARCAMCANNAO1.9°0.2°
CARCAMCANCAK175.3°179.8°
CARCAMCAKOAL56.1°55.4°
CARCAMCAKNAH130.5°124.6°
CARCAMCANH6178.1°179.7°
CAMCARCAQH14178.4°179.7°
NAOCANCAMH6180.0°180.0°
NAOCANCAMCAK177.3°180.0°
CANCAMCAKOAL118.9°124.8°
CANCAMCAKNAH54.5°55.2°
CAMCAKOALNAH172.9°179.9°
CAMCAKNAHCAE175.1°175.6°
CAMCAKNAHH54.8°4.3°
CAKCAMCANH62.7°0.1°
OALCAKNAHCAE2.3°4.3°
OALCAKNAHH5177.7°175.7°
CAKNAHCAEH5180.0°180.0°
CAKNAHCAECAF31.5°34.9°
CAKNAHCAECAD151.8°145.6°
NAHCAECAFCAD176.8°179.5°
NAHCAECAFCAA178.0°180.0°
NAHCAECADNAC178.8°180.0°
NAHCAECAFH12.0°0.3°
NAHCAECADH41.2°0.3°
CAECAFCAAH1180.0°179.7°
CAFCAECADNAC1.7°0.5°
CAECAFCAACAB0.3°0.2°
CAECAFCAAH2179.7°179.7°
CAFCAECADH4178.2°179.7°
CAFCAENAHH5148.5°145.1°
CADCAECAFCAA1.2°0.5°
CAECADNACH4180.0°179.7°
CAECADNACCAB1.4°0.3°
CADCAECAFH1178.8°179.7°
CADCAENAHH528.3°34.4°
CAFCAACABH2180.0°180.0°
CAFCAACABNAC0.1°0.0°
CAFCAACABH3179.9°180.0°
CADNACCABCAA0.4°0.0°
CADNACCABH3179.6°180.0°
CAACABNACH3180.0°180.0°
CABCAACAFH1179.7°180.0°
NACCABCAAH2179.8°180.0°
CABNACCADH4178.6°180.0°
H1CAFCAAH20.3°0.0°
H2CAACABH30.1°0.0°
H8NAZCBBH987.5°120.0°
H8NAZCBBH10152.9°120.0°
H9CBBCBCH1159.8°180.0°
H9CBBCBCH1260.2°60.0°
H9CBBCBCH13179.9°60.0°
H10CBBCBCH1159.8°60.0°
H10CBBCBCH12179.8°180.0°
H10CBBCBCH1360.2°60.0°
H11CBCH12H13120.0°120.0°
H15CAUCAVH160.6°0.1°
H16CAVCAWH170.5°0.1°

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PDB entries from 2024-07-17

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