CX0
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| O3B | PB | doub | 1.48Å | 1.60Å | |
| O1A | PA | doub | 1.48Å | 1.48Å | |
| O2A | PA | sing | 1.61Å | 1.48Å | |
| PA | O3A | sing | 1.61Å | 1.64Å | |
| PA | O5' | sing | 1.61Å | 1.65Å | |
| PB | O3A | sing | 1.61Å | 1.66Å | |
| PB | O1B | sing | 1.61Å | 1.49Å | |
| PB | O2B | sing | 1.61Å | 1.48Å | |
| O5' | C5' | sing | 1.43Å | 1.45Å | |
| C5' | C4' | sing | 1.53Å | 1.55Å | |
| C4' | O4' | sing | 1.44Å | 1.45Å | |
| C4' | C3' | sing | 1.54Å | 1.55Å | |
| O4' | C1' | sing | 1.44Å | 1.45Å | |
| C3' | O3' | sing | 1.43Å | 1.44Å | |
| C3' | C2' | sing | 1.55Å | 1.50Å | |
| C1' | C2' | sing | 1.55Å | 1.50Å | |
| C1' | N9 | sing | 1.46Å | 1.50Å | |
| C8 | N7 | doub | 1.30Å | 1.33Å | Aromatic |
| C8 | N9 | sing | 1.36Å | 1.33Å | Aromatic |
| C2' | O2' | sing | 1.43Å | 1.43Å | |
| N7 | C5 | sing | 1.36Å | 1.32Å | Aromatic |
| N9 | C4 | sing | 1.37Å | 1.35Å | Aromatic |
| C5 | C4 | doub | 1.40Å | 1.34Å | Aromatic |
| C5 | C6 | sing | 1.41Å | 1.33Å | Aromatic |
| C4 | N3 | sing | 1.33Å | 1.34Å | Aromatic |
| N6 | C6 | sing | 1.38Å | 1.33Å | |
| C6 | N1 | doub | 1.33Å | 1.33Å | Aromatic |
| N3 | C2 | doub | 1.32Å | 1.37Å | Aromatic |
| N1 | C2 | sing | 1.33Å | 1.34Å | Aromatic |
| C2 | N2 | sing | 1.39Å | 1.33Å | |
| C5' | H1 | sing | 1.09Å | 1.10Å | |
| C5' | H2 | sing | 1.09Å | 1.10Å | |
| C4' | H3 | sing | 1.09Å | 1.10Å | |
| C3' | H4 | sing | 1.09Å | 1.10Å | |
| C2' | H5 | sing | 1.09Å | 1.10Å | |
| O3' | H6 | sing | 0.97Å | 0.95Å | |
| C1' | H7 | sing | 1.09Å | 1.10Å | |
| O2' | H8 | sing | 0.97Å | 0.95Å | |
| C8 | H9 | sing | 1.08Å | 1.08Å | |
| N2 | H10 | sing | 0.97Å | 1.00Å | |
| N2 | H11 | sing | 0.97Å | 1.00Å | |
| N6 | H12 | sing | 0.97Å | 1.00Å | |
| N6 | H13 | sing | 0.97Å | 1.00Å | |
| O1B | H14 | sing | 0.97Å | 0.95Å | |
| O2A | H15 | sing | 0.97Å | 0.95Å | |
| O2B | H16 | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O3B | PB | O3A | 101.2° | 109.5° |
| O3B | PB | O1B | 109.1° | 109.5° |
| O3B | PB | O2B | 108.4° | 109.5° |
| O1A | PA | O2A | 118.4° | 109.5° |
| O1A | PA | O3A | 109.0° | 109.5° |
| O1A | PA | O5' | 109.1° | 109.5° |
| O2A | PA | O3A | 109.4° | 109.5° |
| O2A | PA | O5' | 107.6° | 109.5° |
| PA | O2A | H15 | 109.5° | 114.0° |
| O3A | PA | O5' | 102.2° | 109.5° |
| PA | O3A | PB | 125.8° | 134.0° |
| PA | O5' | C5' | 122.8° | 123.0° |
| O3A | PB | O1B | 108.6° | 109.5° |
| O3A | PB | O2B | 109.5° | 109.5° |
| O1B | PB | O2B | 118.7° | 109.4° |
| PB | O1B | H14 | 109.5° | 114.0° |
| PB | O2B | H16 | 109.5° | 114.0° |
| O5' | C5' | C4' | 111.3° | 109.5° |
| O5' | C5' | H1 | 109.0° | 109.5° |
| O5' | C5' | H2 | 109.0° | 109.5° |
| C5' | C4' | O4' | 107.0° | 109.9° |
| C5' | C4' | C3' | 113.8° | 109.9° |
| C4' | C5' | H1 | 109.0° | 109.5° |
| C4' | C5' | H2 | 109.0° | 109.5° |
| C5' | C4' | H3 | 110.0° | 109.9° |
| O4' | C4' | C3' | 104.5° | 107.3° |
| C4' | O4' | C1' | 105.2° | 107.0° |
| O4' | C4' | H3 | 111.4° | 109.9° |
| C4' | C3' | O3' | 110.6° | 110.5° |
| C4' | C3' | C2' | 99.9° | 104.1° |
| C3' | C4' | H3 | 110.0° | 110.0° |
| C4' | C3' | H4 | 111.7° | 110.5° |
| O4' | C1' | C2' | 99.0° | 103.4° |
| O4' | C1' | N9 | 106.8° | 110.6° |
| O4' | C1' | H7 | 112.0° | 110.6° |
| O3' | C3' | C2' | 107.8° | 110.5° |
| O3' | C3' | H4 | 113.5° | 110.4° |
| C3' | O3' | H6 | 109.5° | 114.0° |
| C3' | C2' | C1' | 97.5° | 102.1° |
| C3' | C2' | O2' | 109.7° | 110.9° |
| C2' | C3' | H4 | 112.5° | 110.6° |
| C3' | C2' | H5 | 112.3° | 110.9° |
| C2' | C1' | N9 | 116.0° | 110.6° |
| C1' | C2' | O2' | 110.6° | 110.9° |
| C1' | C2' | H5 | 112.2° | 111.0° |
| C2' | C1' | H7 | 111.3° | 110.6° |
| C1' | N9 | C8 | 110.9° | 126.3° |
| C1' | N9 | C4 | 141.4° | 126.3° |
| N9 | C1' | H7 | 111.2° | 110.7° |
| N7 | C8 | N9 | 108.4° | 110.0° |
| C8 | N7 | C5 | 108.4° | 109.5° |
| N7 | C8 | H9 | 125.8° | 125.1° |
| C8 | N9 | C4 | 107.7° | 107.4° |
| N9 | C8 | H9 | 125.8° | 125.0° |
| O2' | C2' | H5 | 113.5° | 110.8° |
| C2' | O2' | H8 | 109.5° | 114.0° |
| N7 | C5 | C4 | 108.3° | 107.1° |
| N7 | C5 | C6 | 129.7° | 134.6° |
| N9 | C4 | C5 | 107.1° | 106.1° |
| N9 | C4 | N3 | 135.3° | 134.8° |
| C4 | C5 | C6 | 122.0° | 118.3° |
| C5 | C4 | N3 | 117.6° | 119.2° |
| C5 | C6 | N6 | 116.2° | 120.7° |
| C5 | C6 | N1 | 121.7° | 118.6° |
| C4 | N3 | C2 | 119.7° | 120.6° |
| N6 | C6 | N1 | 122.1° | 120.7° |
| C6 | N6 | H12 | 109.5° | 120.0° |
| C6 | N6 | H13 | 109.4° | 120.0° |
| C6 | N1 | C2 | 117.0° | 121.2° |
| N3 | C2 | N1 | 122.0° | 122.2° |
| N3 | C2 | N2 | 121.6° | 118.9° |
| N1 | C2 | N2 | 116.4° | 118.9° |
| C2 | N2 | H10 | 109.5° | 120.0° |
| C2 | N2 | H11 | 109.5° | 120.0° |
| H1 | C5' | H2 | 109.5° | 109.5° |
| H10 | N2 | H11 | 109.5° | 120.0° |
| H12 | N6 | H13 | 109.5° | 120.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O3B | PB | O3A | PA | 64.9° | 40.0° |
| O3B | PB | O3A | O1B | 114.7° | 120.0° |
| O3B | PB | O3A | O2B | 114.2° | 120.0° |
| O3B | PB | O1B | O2B | 124.7° | 120.0° |
| O3B | PB | O1B | H14 | 0.0° | 180.0° |
| O3B | PB | O2B | H16 | 0.0° | 60.0° |
| O1A | PA | O2A | O3A | 125.6° | 120.0° |
| O1A | PA | O2A | O5' | 124.2° | 120.0° |
| O1A | PA | O3A | O5' | 115.4° | 120.0° |
| O1A | PA | O3A | PB | 12.4° | 40.0° |
| O1A | PA | O5' | C5' | 130.7° | 55.0° |
| O1A | PA | O2A | H15 | 0.0° | 180.0° |
| O2A | PA | O3A | O5' | 113.8° | 120.0° |
| O2A | PA | O3A | PB | 143.3° | 80.0° |
| O2A | PA | O5' | C5' | 99.7° | 65.0° |
| PA | O3A | PB | O1B | 179.6° | 80.0° |
| PA | O3A | PB | O2B | 49.4° | 160.0° |
| O3A | PA | O5' | C5' | 15.4° | 175.0° |
| O3A | PA | O2A | H15 | 125.5° | 60.0° |
| O5' | PA | O3A | PB | 103.0° | 160.0° |
| PA | O5' | C5' | C4' | 95.6° | 180.0° |
| PA | O5' | C5' | H1 | 144.1° | 60.0° |
| PA | O5' | C5' | H2 | 24.7° | 60.0° |
| O5' | PA | O2A | H15 | 124.2° | 60.0° |
| O3A | PB | O1B | O2B | 125.8° | 120.0° |
| O3A | PB | O1B | H14 | 109.5° | 59.9° |
| O3A | PB | O2B | H16 | 109.5° | 180.0° |
| O1B | PB | O2B | H16 | 125.1° | 60.0° |
| O2B | PB | O1B | H14 | 124.7° | 60.0° |
| O5' | C5' | C4' | H1 | 120.3° | 120.0° |
| O5' | C5' | C4' | H2 | 120.3° | 120.0° |
| O5' | C5' | C4' | O4' | 74.8° | 66.5° |
| O5' | C5' | C4' | C3' | 170.3° | 175.7° |
| O5' | C5' | H1 | H2 | 119.2° | 120.0° |
| O5' | C5' | C4' | H3 | 46.3° | 54.6° |
| C5' | C4' | O4' | C3' | 121.0° | 119.4° |
| C5' | C4' | O4' | H3 | 120.3° | 121.0° |
| C5' | C4' | C3' | H3 | 124.0° | 121.0° |
| C5' | C4' | O4' | C1' | 134.8° | 145.9° |
| C5' | C4' | C3' | O3' | 152.2° | 119.9° |
| C5' | C4' | C3' | C2' | 94.5° | 121.5° |
| C4' | C5' | H1 | H2 | 119.1° | 120.0° |
| C5' | C4' | C3' | H4 | 24.7° | 2.7° |
| O4' | C4' | C3' | H3 | 119.6° | 119.5° |
| O4' | C4' | C3' | O3' | 91.5° | 120.7° |
| O4' | C4' | C3' | C2' | 21.9° | 2.0° |
| C4' | O4' | C1' | C2' | 44.2° | 40.1° |
| C4' | O4' | C1' | N9 | 165.0° | 158.6° |
| O4' | C4' | C5' | H1 | 45.5° | 173.5° |
| O4' | C4' | C5' | H2 | 164.9° | 53.5° |
| O4' | C4' | C3' | H4 | 141.1° | 116.7° |
| C4' | O4' | C1' | H7 | 73.1° | 78.4° |
| C3' | C4' | O4' | C1' | 13.8° | 26.5° |
| C4' | C3' | O3' | C2' | 108.3° | 114.7° |
| C4' | C3' | O3' | H4 | 126.4° | 122.6° |
| C4' | C3' | C2' | H4 | 118.6° | 118.8° |
| C4' | C3' | C2' | C1' | 47.6° | 20.9° |
| C4' | C3' | C2' | O2' | 162.7° | 139.1° |
| C3' | C4' | C5' | H1 | 69.5° | 55.7° |
| C3' | C4' | C5' | H2 | 50.0° | 64.3° |
| C4' | C3' | C2' | H5 | 70.1° | 97.4° |
| C4' | C3' | O3' | H6 | 180.0° | 180.0° |
| O4' | C1' | C2' | C3' | 57.4° | 37.0° |
| O4' | C1' | C2' | N9 | 113.8° | 118.5° |
| O4' | C1' | C2' | H7 | 117.9° | 118.5° |
| O4' | C1' | N9 | H7 | 122.4° | 123.0° |
| O4' | C1' | N9 | C8 | 4.2° | 23.5° |
| O4' | C1' | C2' | O2' | 171.8° | 155.2° |
| O4' | C1' | N9 | C4 | 174.1° | 156.5° |
| C1' | O4' | C4' | H3 | 104.9° | 93.0° |
| O4' | C1' | C2' | H5 | 60.4° | 81.2° |
| O3' | C3' | C2' | H4 | 125.8° | 122.6° |
| O3' | C3' | C2' | C1' | 68.0° | 97.8° |
| O3' | C3' | C2' | O2' | 47.1° | 20.4° |
| O3' | C3' | C4' | H3 | 28.1° | 1.2° |
| O3' | C3' | C2' | H5 | 174.3° | 143.9° |
| C3' | C2' | C1' | O2' | 114.4° | 118.2° |
| C3' | C2' | C1' | H5 | 117.8° | 118.2° |
| C3' | C2' | C1' | N9 | 171.2° | 155.5° |
| C3' | C2' | O2' | H5 | 126.5° | 123.6° |
| C2' | C3' | C4' | H3 | 141.5° | 117.5° |
| C2' | C3' | O3' | H6 | 71.7° | 65.2° |
| C3' | C2' | C1' | H7 | 60.5° | 81.4° |
| C3' | C2' | O2' | H8 | 180.0° | 61.5° |
| C2' | C1' | N9 | H7 | 128.4° | 122.9° |
| C2' | C1' | N9 | C8 | 105.0° | 90.5° |
| C1' | C2' | O2' | H5 | 127.1° | 123.7° |
| C2' | C1' | N9 | C4 | 76.7° | 89.5° |
| C1' | C2' | C3' | H4 | 166.2° | 139.6° |
| C1' | C2' | O2' | H8 | 73.7° | 174.2° |
| C1' | N9 | C8 | N7 | 179.3° | 180.0° |
| C1' | N9 | C8 | C4 | 178.9° | 180.0° |
| N9 | C1' | C2' | O2' | 74.5° | 86.3° |
| C1' | N9 | C4 | C5 | 178.7° | 180.0° |
| C1' | N9 | C4 | N3 | 1.7° | 0.0° |
| N9 | C1' | C2' | H5 | 53.4° | 37.3° |
| C1' | N9 | C8 | H9 | 0.7° | 0.3° |
| N7 | C8 | N9 | H9 | 180.0° | 179.7° |
| N7 | C8 | N9 | C4 | 0.4° | 0.0° |
| C8 | N7 | C5 | C4 | 0.0° | 0.0° |
| C8 | N7 | C5 | C6 | 179.8° | 180.0° |
| N9 | C8 | N7 | C5 | 0.3° | 0.0° |
| C8 | N9 | C4 | C5 | 0.3° | 0.0° |
| C8 | N9 | C4 | N3 | 179.9° | 180.0° |
| C8 | N9 | C1' | H7 | 126.7° | 146.6° |
| O2' | C2' | C3' | H4 | 78.7° | 102.2° |
| O2' | C2' | C1' | H7 | 53.9° | 36.7° |
| N7 | C5 | C4 | N9 | 0.2° | 0.0° |
| N7 | C5 | C4 | C6 | 179.8° | 180.0° |
| N7 | C5 | C4 | N3 | 179.8° | 180.0° |
| N7 | C5 | C6 | N6 | 0.2° | 0.0° |
| N7 | C5 | C6 | N1 | 179.9° | 180.0° |
| C5 | N7 | C8 | H9 | 179.7° | 179.7° |
| N9 | C4 | C5 | N3 | 179.7° | 180.0° |
| N9 | C4 | C5 | C6 | 179.6° | 180.0° |
| N9 | C4 | N3 | C2 | 179.6° | 180.0° |
| C4 | N9 | C1' | H7 | 51.7° | 33.5° |
| C4 | N9 | C8 | H9 | 179.6° | 179.7° |
| C4 | C5 | C6 | N6 | 179.9° | 180.0° |
| C4 | C5 | C6 | N1 | 0.2° | 0.1° |
| C5 | C4 | N3 | C2 | 0.1° | 0.0° |
| C6 | C5 | C4 | N3 | 0.1° | 0.0° |
| C5 | C6 | N6 | N1 | 179.9° | 180.0° |
| C5 | C6 | N1 | C2 | 0.2° | 0.1° |
| C5 | C6 | N6 | H12 | 179.9° | 180.0° |
| C5 | C6 | N6 | H13 | 59.9° | 0.1° |
| C4 | N3 | C2 | N1 | 0.1° | 0.1° |
| C4 | N3 | C2 | N2 | 179.7° | 179.9° |
| N6 | C6 | N1 | C2 | 180.0° | 179.9° |
| C6 | N6 | H12 | H13 | 120.0° | 179.9° |
| C6 | N1 | C2 | N3 | 0.0° | 0.1° |
| C6 | N1 | C2 | N2 | 179.8° | 179.9° |
| N1 | C6 | N6 | H12 | 0.0° | 0.1° |
| N1 | C6 | N6 | H13 | 120.0° | 180.0° |
| N3 | C2 | N1 | N2 | 179.8° | 180.0° |
| N3 | C2 | N2 | H10 | 0.0° | 0.1° |
| N3 | C2 | N2 | H11 | 120.0° | 180.0° |
| N1 | C2 | N2 | H10 | 179.8° | 179.9° |
| N1 | C2 | N2 | H11 | 59.8° | 0.0° |
| C2 | N2 | H10 | H11 | 120.0° | 179.9° |
| H1 | C5' | C4' | H3 | 166.6° | 65.4° |
| H2 | C5' | C4' | H3 | 73.9° | 174.6° |
| H3 | C4' | C3' | H4 | 99.3° | 123.7° |
| H4 | C3' | C2' | H5 | 48.5° | 21.4° |
| H4 | C3' | O3' | H6 | 53.5° | 57.4° |
| H5 | C2' | C1' | H7 | 178.3° | 160.3° |
| H5 | C2' | O2' | H8 | 53.5° | 62.1° |
