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CVX

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C5C4sing1.53Å1.52Å
C4C3sing1.53Å1.54Å
C3C2sing1.53Å1.55Å
C2O3sing1.43Å1.40Å
O3Psing1.61Å1.54Å
PC1sing1.82Å1.76Å
PO2doub1.48Å1.53Å
POX0sing1.61Å1.62Å
C5H51Csing1.09Å1.10Å
C5H52Csing1.09Å1.10Å
C5H53Csing1.09Å1.10Å
C4H41Csing1.09Å1.10Å
C4H42Csing1.09Å1.10Å
C3H31Csing1.09Å1.10Å
C3H32Csing1.09Å1.10Å
C2H21Csing1.09Å1.10Å
C2H22Csing1.09Å1.10Å
C1H11Csing1.09Å1.10Å
C1H12Csing1.09Å1.10Å
C1H13Csing1.09Å1.10Å
OX0HX0sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C5C4C3113.6°109.5°
C4C5H51C109.5°109.4°
C4C5H52C109.5°109.4°
C4C5H53C109.5°109.5°
C5C4H41C108.1°109.5°
C5C4H42C107.2°109.4°
C4C3C2114.3°109.5°
C3C4H41C108.1°109.5°
C3C4H42C107.2°109.5°
C4C3H31C107.9°109.5°
C4C3H32C106.8°109.4°
C3C2O3105.1°109.5°
C2C3H31C107.9°109.5°
C2C3H32C106.8°109.5°
C3C2H21C110.9°109.5°
C3C2H22C111.9°109.5°
C2O3P128.8°123.0°
O3C2H21C111.0°109.5°
O3C2H22C111.9°109.4°
O3PC1117.4°109.5°
O3PO2108.2°109.5°
O3POX0104.6°109.5°
C1PO2109.3°109.5°
C1POX0110.0°109.4°
PC1H11C109.5°109.5°
PC1H12C109.5°109.5°
PC1H13C109.4°109.4°
O2POX0106.7°109.5°
POX0HX0109.5°114.0°
H51CC5H52C109.5°109.5°
H51CC5H53C109.4°109.5°
H52CC5H53C109.5°109.5°
H41CC4H42C112.7°109.5°
H31CC3H32C113.4°109.5°
H21CC2H22C106.2°109.5°
H11CC1H12C109.5°109.5°
H11CC1H13C109.5°109.5°
H12CC1H13C109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C5C4C3H41C120.0°120.0°
C5C4C3H42C118.2°120.0°
C5C4C3C250.6°180.0°
C4C5H51CH52C120.0°120.0°
C4C5H51CH53C120.0°120.0°
C4C5H52CH53C120.0°120.0°
C5C4H41CH42C118.3°120.0°
C5C4C3H31C170.6°60.0°
C5C4C3H32C67.2°60.0°
C4C3C2H31C120.0°120.0°
C4C3C2H32C117.8°120.0°
C4C3C2O3120.7°180.0°
C3C4C5H51C75.7°180.0°
C3C4C5H52C44.3°60.0°
C3C4C5H53C164.3°60.0°
C3C4H41CH42C118.3°120.0°
C4C3H31CH32C118.0°120.0°
C4C3C2H21C0.7°60.0°
C4C3C2H22C117.6°60.0°
C3C2O3H21C120.0°120.0°
C3C2O3H22C121.6°120.0°
C3C2O3P172.8°180.0°
C2C3C4H41C69.4°60.0°
C2C3C4H42C168.8°60.0°
C2C3H31CH32C118.0°120.0°
C3C2H21CH22C121.7°120.0°
C2O3PC125.5°175.0°
C2O3PO2149.8°55.0°
C2O3POX096.7°65.0°
O3C2C3H31C119.3°60.0°
O3C2C3H32C2.9°60.0°
O3C2H21CH22C121.8°120.0°
O3PC1O2123.7°120.0°
O3PC1OX0119.4°120.0°
O3PO2OX0112.1°120.0°
PO3C2H21C52.8°60.0°
PO3C2H22C65.6°60.0°
O3PC1H11C60.3°60.0°
O3PC1H12C179.7°180.0°
O3PC1H13C59.7°60.0°
O3POX0HX057.0°59.9°
C1PO2OX0118.9°119.9°
PC1H11CH12C120.0°120.0°
PC1H11CH13C120.0°119.9°
PC1H12CH13C120.0°120.0°
C1POX0HX070.0°60.1°
O2PC1H11C175.9°180.0°
O2PC1H12C55.9°60.0°
O2PC1H13C64.1°60.0°
O2POX0HX0171.6°180.0°
OX0PC1H11C59.1°60.0°
OX0PC1H12C60.9°60.0°
OX0PC1H13C179.1°180.0°
H51CC5H52CH53C120.0°120.1°
H51CC5C4H41C44.3°60.0°
H51CC5C4H42C166.0°60.0°
H52CC5C4H41C164.3°60.0°
H52CC5C4H42C73.9°NaN°
H53CC5C4H41C75.7°180.0°
H53CC5C4H42C46.1°60.0°
H41CC4C3H31C50.6°180.0°
H41CC4C3H32C172.8°60.0°
H42CC4C3H31C71.2°60.0°
H42CC4C3H32C51.0°180.0°
H31CC3C2H21C120.7°180.0°
H31CC3C2H22C2.4°60.0°
H32CC3C2H21C117.1°60.0°
H32CC3C2H22C124.5°NaN°
H11CC1H12CH13C120.0°120.0°

246704

PDB entries from 2025-12-24

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