CVC
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| N02 | C02 | sing | 1.38Å | 1.53Å | |
| C02 | N01 | doub | 1.33Å | 1.34Å | |
| C02 | C01 | sing | 1.41Å | 1.61Å | |
| N01 | C4 | sing | 1.33Å | 1.52Å | |
| OP2 | P | doub | 1.48Å | 1.51Å | |
| C01 | C8 | doub | 1.35Å | 1.38Å | |
| C4 | O01 | doub | 1.22Å | 1.23Å | |
| C4 | N9 | sing | 1.35Å | 1.46Å | |
| N9 | C8 | sing | 1.36Å | 1.49Å | |
| N9 | C1' | sing | 1.47Å | 1.45Å | |
| O5' | P | sing | 1.61Å | 1.58Å | |
| O5' | C5' | sing | 1.43Å | 1.40Å | |
| O4' | C1' | sing | 1.44Å | 1.40Å | |
| O4' | C4' | sing | 1.44Å | 1.46Å | |
| P | OP1 | sing | 1.61Å | 1.51Å | |
| P | O02 | sing | 1.61Å | 1.51Å | |
| C1' | C2' | sing | 1.55Å | 1.52Å | |
| C5' | C4' | sing | 1.53Å | 1.50Å | |
| C4' | C3' | sing | 1.55Å | 1.53Å | |
| C2' | O2' | sing | 1.45Å | 1.42Å | |
| C2' | C3' | sing | 1.53Å | 1.53Å | |
| O2' | V | sing | 1.88Å | 2.01Å | |
| C3' | O3' | sing | 1.45Å | 1.42Å | |
| O1V | V | sing | 1.84Å | 1.62Å | |
| O3' | V | sing | 1.87Å | 1.90Å | |
| V | O2V | sing | 1.84Å | 1.62Å | |
| C5' | H1 | sing | 1.09Å | 1.10Å | |
| C5' | H2 | sing | 1.09Å | 1.10Å | |
| C4' | H3 | sing | 1.09Å | 1.10Å | |
| C3' | H4 | sing | 1.09Å | 1.10Å | |
| C2' | H5 | sing | 1.09Å | 1.10Å | |
| C1' | H6 | sing | 1.09Å | 1.10Å | |
| C01 | H7 | sing | 1.08Å | 1.08Å | |
| O1V | H8 | sing | 0.97Å | 0.95Å | |
| N02 | H9 | sing | 0.97Å | 1.00Å | |
| N02 | H10 | sing | 0.97Å | 1.00Å | |
| O02 | H11 | sing | 0.97Å | 0.95Å | |
| O2V | H12 | sing | 0.97Å | 0.95Å | |
| OP1 | H13 | sing | 0.97Å | 0.95Å | |
| C8 | H14 | sing | 1.08Å | 1.08Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| N02 | C02 | N01 | 121.9° | 120.2° |
| N02 | C02 | C01 | 117.1° | 120.2° |
| C02 | N02 | H9 | 120.0° | 120.0° |
| C02 | N02 | H10 | 120.0° | 120.0° |
| N01 | C02 | C01 | 121.0° | 119.6° |
| C02 | N01 | C4 | 120.7° | 120.7° |
| C02 | C01 | C8 | 118.0° | 119.0° |
| C02 | C01 | H7 | 121.0° | 120.5° |
| N01 | C4 | O01 | 123.3° | 119.5° |
| N01 | C4 | N9 | 118.7° | 121.1° |
| OP2 | P | O5' | 101.4° | 109.5° |
| OP2 | P | OP1 | 117.0° | 109.5° |
| OP2 | P | O02 | 106.0° | 109.5° |
| C01 | C8 | N9 | 121.1° | 119.3° |
| C8 | C01 | H7 | 121.0° | 120.5° |
| C01 | C8 | H14 | 119.4° | 120.4° |
| O01 | C4 | N9 | 118.0° | 119.5° |
| C4 | N9 | C8 | 120.2° | 120.3° |
| C4 | N9 | C1' | 121.2° | 119.8° |
| C8 | N9 | C1' | 117.2° | 119.9° |
| N9 | C8 | H14 | 119.5° | 120.3° |
| N9 | C1' | O4' | 111.7° | 110.4° |
| N9 | C1' | C2' | 107.8° | 110.4° |
| N9 | C1' | H6 | 110.8° | 110.4° |
| P | O5' | C5' | 122.0° | 123.0° |
| O5' | P | OP1 | 106.7° | 109.5° |
| O5' | P | O02 | 111.3° | 109.4° |
| O5' | C5' | C4' | 109.3° | 109.4° |
| O5' | C5' | H1 | 109.5° | 109.5° |
| O5' | C5' | H2 | 109.5° | 109.5° |
| C1' | O4' | C4' | 109.0° | 105.3° |
| O4' | C1' | C2' | 105.0° | 104.6° |
| O4' | C1' | H6 | 111.5° | 110.4° |
| O4' | C4' | C5' | 109.0° | 110.4° |
| O4' | C4' | C3' | 106.6° | 104.6° |
| O4' | C4' | H3 | 109.8° | 110.5° |
| OP1 | P | O02 | 113.8° | 109.4° |
| P | OP1 | H13 | 109.5° | 114.0° |
| P | O02 | H11 | 109.5° | 114.0° |
| C1' | C2' | O2' | 112.7° | 108.4° |
| C1' | C2' | C3' | 101.9° | 104.4° |
| C1' | C2' | H5 | 107.4° | 108.6° |
| C2' | C1' | H6 | 109.8° | 110.4° |
| C5' | C4' | C3' | 113.4° | 110.4° |
| C4' | C5' | H1 | 109.5° | 109.5° |
| C4' | C5' | H2 | 109.5° | 109.4° |
| C5' | C4' | H3 | 109.2° | 110.4° |
| C4' | C3' | C2' | 103.1° | 104.3° |
| C4' | C3' | O3' | 109.4° | 108.3° |
| C3' | C4' | H3 | 108.8° | 110.4° |
| C4' | C3' | H4 | 110.2° | 109.3° |
| O2' | C2' | C3' | 118.4° | 116.3° |
| C2' | O2' | V | 98.9° | 99.8° |
| O2' | C2' | H5 | 108.6° | 109.5° |
| C2' | C3' | O3' | 111.7° | 116.3° |
| C2' | C3' | H4 | 110.2° | 108.8° |
| C3' | C2' | H5 | 107.3° | 109.4° |
| O2' | V | O1V | 116.0° | 111.9° |
| O2' | V | O3' | 93.8° | 97.1° |
| O2' | V | O2V | 110.3° | 111.8° |
| C3' | O3' | V | 107.2° | 99.8° |
| O3' | C3' | H4 | 111.9° | 109.5° |
| O1V | V | O3' | 101.0° | 111.9° |
| O1V | V | O2V | 122.0° | 111.6° |
| V | O1V | H8 | 109.5° | 114.0° |
| O3' | V | O2V | 108.8° | 111.9° |
| V | O2V | H12 | 109.5° | 114.1° |
| H1 | C5' | H2 | 109.4° | 109.5° |
| H9 | N02 | H10 | 120.0° | 120.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| N02 | C02 | N01 | C01 | 178.8° | 179.7° |
| N02 | C02 | N01 | C4 | 178.7° | 179.7° |
| N02 | C02 | C01 | C8 | 179.3° | 179.7° |
| N02 | C02 | C01 | H7 | 0.7° | 0.4° |
| C02 | N02 | H9 | H10 | 180.0° | 180.0° |
| N01 | C02 | C01 | C8 | 0.4° | 0.1° |
| C02 | N01 | C4 | O01 | 180.0° | 179.9° |
| C02 | N01 | C4 | N9 | 2.4° | 0.0° |
| N01 | C02 | C01 | H7 | 179.6° | 180.0° |
| N01 | C02 | N02 | H9 | 0.0° | 0.0° |
| N01 | C02 | N02 | H10 | 180.0° | 179.9° |
| C01 | C02 | N01 | C4 | 0.2° | 0.0° |
| C02 | C01 | C8 | H7 | 180.0° | 179.9° |
| C02 | C01 | C8 | N9 | 3.5° | 0.0° |
| C01 | C02 | N02 | H9 | 178.8° | 179.7° |
| C01 | C02 | N02 | H10 | 1.2° | 0.3° |
| C02 | C01 | C8 | H14 | 176.4° | 180.0° |
| N01 | C4 | O01 | N9 | 177.6° | 179.9° |
| N01 | C4 | N9 | C8 | 5.5° | 0.1° |
| N01 | C4 | N9 | C1' | 171.7° | 180.0° |
| OP2 | P | O5' | OP1 | 122.9° | 120.0° |
| OP2 | P | O5' | O02 | 112.4° | 120.0° |
| OP2 | P | O5' | C5' | 174.4° | 55.0° |
| OP2 | P | OP1 | O02 | 124.2° | 120.0° |
| OP2 | P | O02 | H11 | 0.0° | 180.0° |
| OP2 | P | OP1 | H13 | 0.0° | 60.0° |
| C01 | C8 | N9 | C4 | 6.2° | 0.1° |
| C01 | C8 | N9 | H14 | 180.0° | 179.9° |
| C01 | C8 | N9 | C1' | 172.9° | 179.9° |
| O01 | C4 | N9 | C8 | 176.8° | 180.0° |
| O01 | C4 | N9 | C1' | 10.6° | 0.1° |
| C4 | N9 | C8 | C1' | 166.7° | 179.9° |
| C4 | N9 | C1' | O4' | 124.5° | 53.6° |
| C4 | N9 | C1' | C2' | 120.6° | 61.6° |
| C4 | N9 | C1' | H6 | 0.5° | 176.0° |
| C4 | N9 | C8 | H14 | 173.8° | 179.9° |
| C8 | N9 | C1' | O4' | 68.9° | 126.5° |
| C8 | N9 | C1' | C2' | 45.9° | 118.3° |
| C8 | N9 | C1' | H6 | 166.0° | 4.1° |
| N9 | C8 | C01 | H7 | 176.4° | 179.9° |
| N9 | C1' | O4' | C2' | 116.6° | 118.8° |
| N9 | C1' | O4' | H6 | 124.6° | 122.4° |
| N9 | C1' | O4' | C4' | 147.9° | 159.0° |
| N9 | C1' | C2' | H6 | 120.7° | 122.4° |
| N9 | C1' | C2' | O2' | 74.2° | 92.9° |
| N9 | C1' | C2' | C3' | 157.8° | 142.6° |
| N9 | C1' | C2' | H5 | 45.3° | 25.9° |
| C1' | N9 | C8 | H14 | 7.1° | 0.0° |
| O5' | P | OP1 | O02 | 123.2° | 120.0° |
| P | O5' | C5' | C4' | 126.8° | 180.0° |
| P | O5' | C5' | H1 | 6.8° | 60.1° |
| P | O5' | C5' | H2 | 113.2° | 60.0° |
| O5' | P | O02 | H11 | 109.5° | 59.9° |
| O5' | P | OP1 | H13 | 112.6° | 180.0° |
| O5' | C5' | C4' | O4' | 3.8° | 69.8° |
| C5' | O5' | P | OP1 | 62.7° | 175.0° |
| C5' | O5' | P | O02 | 62.0° | 65.1° |
| O5' | C5' | C4' | H1 | 120.0° | 120.0° |
| O5' | C5' | C4' | H2 | 120.0° | 120.0° |
| O5' | C5' | C4' | C3' | 114.7° | 175.0° |
| O5' | C5' | H1 | H2 | 120.0° | 120.1° |
| O5' | C5' | C4' | H3 | 123.7° | 52.7° |
| O4' | C1' | C2' | H6 | 120.0° | 118.8° |
| C1' | O4' | C4' | C5' | 133.7° | 158.9° |
| C1' | O4' | C4' | C3' | 11.0° | 40.1° |
| O4' | C1' | C2' | O2' | 166.5° | 148.3° |
| O4' | C1' | C2' | C3' | 38.6° | 23.8° |
| C1' | O4' | C4' | H3 | 106.7° | 78.6° |
| O4' | C1' | C2' | H5 | 74.0° | 92.8° |
| C4' | O4' | C1' | C2' | 31.3° | 40.2° |
| O4' | C4' | C5' | C3' | 118.5° | 115.2° |
| O4' | C4' | C5' | H3 | 119.9° | 122.5° |
| O4' | C4' | C3' | H3 | 118.4° | 118.9° |
| O4' | C4' | C3' | C2' | 13.5° | 23.8° |
| O4' | C4' | C3' | O3' | 105.5° | 148.3° |
| O4' | C4' | C5' | H1 | 123.8° | 50.2° |
| O4' | C4' | C5' | H2 | 116.2° | 170.2° |
| O4' | C4' | C3' | H4 | 131.0° | 92.5° |
| C4' | O4' | C1' | H6 | 87.6° | 78.6° |
| OP1 | P | O02 | H11 | 129.9° | 60.0° |
| O02 | P | OP1 | H13 | 124.2° | 60.0° |
| C1' | C2' | C3' | C4' | 30.6° | 0.0° |
| C1' | C2' | O2' | C3' | 118.6° | 117.1° |
| C1' | C2' | O2' | H5 | 118.8° | 118.3° |
| C1' | C2' | C3' | H5 | 112.6° | 116.1° |
| C1' | C2' | O2' | V | 88.2° | 138.0° |
| C1' | C2' | C3' | O3' | 86.7° | 119.2° |
| C1' | C2' | C3' | H4 | 148.2° | 116.6° |
| C5' | C4' | C3' | H3 | 121.7° | 122.3° |
| C5' | C4' | C3' | C2' | 106.4° | 142.6° |
| C5' | C4' | C3' | O3' | 134.6° | 92.9° |
| C4' | C5' | H1 | H2 | 120.1° | 120.0° |
| C5' | C4' | C3' | H4 | 11.2° | 26.3° |
| C4' | C3' | C2' | O2' | 154.8° | 119.3° |
| C4' | C3' | C2' | O3' | 117.4° | 119.2° |
| C4' | C3' | C2' | H4 | 117.6° | 116.6° |
| C4' | C3' | O3' | H4 | 122.4° | 119.2° |
| C4' | C3' | O3' | V | 133.6° | 138.0° |
| C3' | C4' | C5' | H1 | 5.3° | 65.0° |
| C3' | C4' | C5' | H2 | 125.3° | 55.0° |
| C4' | C3' | C2' | H5 | 82.0° | 116.1° |
| O2' | C2' | C3' | H5 | 123.2° | 124.7° |
| O2' | C2' | C3' | O3' | 37.4° | 0.0° |
| C2' | O2' | V | O1V | 89.6° | 146.0° |
| C2' | O2' | V | O3' | 14.6° | 29.0° |
| C2' | O2' | V | O2V | 126.3° | 88.0° |
| O2' | C2' | C3' | H4 | 87.6° | 124.1° |
| O2' | C2' | C1' | H6 | 46.5° | 29.5° |
| C3' | C2' | O2' | V | 30.4° | 21.0° |
| C2' | C3' | O3' | H4 | 124.1° | 123.8° |
| C2' | C3' | O3' | V | 20.1° | 21.0° |
| C2' | C3' | C4' | H3 | 131.8° | 95.1° |
| C3' | C2' | C1' | H6 | 81.4° | 95.0° |
| O2' | V | O3' | C3' | 3.4° | 29.0° |
| O2' | V | O1V | O3' | 99.8° | 107.7° |
| O2' | V | O1V | O2V | 139.6° | 126.1° |
| O2' | V | O3' | O2V | 113.0° | 116.9° |
| V | O2' | C2' | H5 | 153.0° | 103.7° |
| O2' | V | O1V | H8 | 180.0° | 72.2° |
| O2' | V | O2V | H12 | 180.0° | 72.4° |
| C3' | O3' | V | O1V | 120.8° | 146.0° |
| C3' | O3' | V | O2V | 109.6° | 87.9° |
| O3' | C3' | C4' | H3 | 12.8° | 29.4° |
| O3' | C3' | C2' | H5 | 160.7° | 124.7° |
| O1V | V | O3' | O2V | 129.6° | 126.0° |
| O1V | V | O2V | H12 | 38.4° | 53.8° |
| V | O3' | C3' | H4 | 104.0° | 102.8° |
| O3' | V | O1V | H8 | 80.2° | 179.9° |
| O3' | V | O2V | H12 | 78.4° | 180.0° |
| O2V | V | O1V | H8 | 40.4° | 53.9° |
| H1 | C5' | C4' | H3 | 116.3° | 172.7° |
| H2 | C5' | C4' | H3 | 3.7° | 67.3° |
| H3 | C4' | C3' | H4 | 110.6° | 148.7° |
| H4 | C3' | C2' | H5 | 35.6° | 0.5° |
| H5 | C2' | C1' | H6 | 166.0° | 148.3° |
| H7 | C01 | C8 | H14 | 3.6° | 0.1° |
