CTP
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| N1 | C2 | sing | 1.34Å | 1.36Å | |
| N1 | C6 | sing | 1.36Å | 1.35Å | |
| N1 | C1' | sing | 1.46Å | 1.49Å | |
| C2 | N3 | sing | 1.33Å | 1.32Å | |
| C2 | O2 | doub | 1.22Å | 1.25Å | |
| N3 | C4 | doub | 1.33Å | 1.34Å | |
| C4 | C5 | sing | 1.41Å | 1.38Å | |
| C4 | N4 | sing | 1.38Å | 1.34Å | |
| C5 | C6 | doub | 1.35Å | 1.38Å | |
| C5 | H5 | sing | 1.08Å | 1.10Å | |
| C6 | H6 | sing | 1.08Å | 1.10Å | |
| N4 | HN41 | sing | 0.97Å | 1.02Å | |
| N4 | HN42 | sing | 0.97Å | 1.02Å | |
| C1' | C2' | sing | 1.54Å | 1.52Å | |
| C1' | O4' | sing | 1.45Å | 1.42Å | |
| C1' | H1' | sing | 1.09Å | 1.11Å | |
| C2' | O2' | sing | 1.43Å | 1.42Å | |
| C2' | C3' | sing | 1.55Å | 1.50Å | |
| C2' | H2' | sing | 1.09Å | 1.12Å | |
| O2' | HO2' | sing | 0.97Å | 0.95Å | |
| C3' | C4' | sing | 1.54Å | 1.53Å | |
| C3' | O3' | sing | 1.43Å | 1.43Å | |
| C3' | H3' | sing | 1.09Å | 1.12Å | |
| C4' | O4' | sing | 1.44Å | 1.43Å | |
| C4' | C5' | sing | 1.53Å | 1.50Å | |
| C4' | H4' | sing | 1.09Å | 1.11Å | |
| O3' | HO3' | sing | 0.97Å | 0.95Å | |
| C5' | O5' | sing | 1.43Å | 1.40Å | |
| C5' | H5'1 | sing | 1.09Å | 1.11Å | |
| C5' | H5'2 | sing | 1.09Å | 1.12Å | |
| O5' | PA | sing | 1.61Å | 1.65Å | |
| PA | O1A | doub | 1.48Å | 1.55Å | |
| PA | O2A | sing | 1.61Å | 1.54Å | |
| PA | O3A | sing | 1.61Å | 1.67Å | |
| O2A | HOA2 | sing | 0.97Å | 0.95Å | |
| O3A | PB | sing | 1.61Å | 1.65Å | |
| PB | O1B | doub | 1.48Å | 1.57Å | |
| PB | O2B | sing | 1.61Å | 1.56Å | |
| PB | O3B | sing | 1.61Å | 1.67Å | |
| O2B | HOB2 | sing | 0.97Å | 0.95Å | |
| O3B | PG | sing | 1.61Å | 1.66Å | |
| PG | O1G | doub | 1.48Å | 1.57Å | |
| PG | O2G | sing | 1.61Å | 1.57Å | |
| PG | O3G | sing | 1.61Å | 1.57Å | |
| O2G | HOG2 | sing | 0.97Å | 0.95Å | |
| O3G | HOG3 | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| C2 | N1 | C6 | 116.1° | 120.4° |
| C2 | N1 | C1' | 120.9° | 119.9° |
| N1 | C2 | N3 | 123.5° | 121.1° |
| N1 | C2 | O2 | 121.9° | 119.5° |
| C6 | N1 | C1' | 122.9° | 119.8° |
| N1 | C6 | C5 | 122.9° | 119.3° |
| N1 | C6 | H6 | 117.3° | 120.4° |
| N1 | C1' | C2' | 110.1° | 110.4° |
| N1 | C1' | O4' | 111.6° | 110.4° |
| N1 | C1' | H1' | 106.0° | 110.4° |
| N3 | C2 | O2 | 114.5° | 119.5° |
| C2 | N3 | C4 | 120.1° | 120.7° |
| N3 | C4 | C5 | 120.3° | 119.7° |
| N3 | C4 | N4 | 117.4° | 120.1° |
| C5 | C4 | N4 | 122.3° | 120.2° |
| C4 | C5 | C6 | 117.0° | 118.9° |
| C4 | C5 | H5 | 121.6° | 120.5° |
| C4 | N4 | HN41 | 117.3° | 120.0° |
| C4 | N4 | HN42 | 109.3° | 120.0° |
| C6 | C5 | H5 | 121.4° | 120.5° |
| C5 | C6 | H6 | 119.8° | 120.3° |
| HN41 | N4 | HN42 | 109.4° | 120.0° |
| C2' | C1' | O4' | 104.0° | 104.9° |
| C2' | C1' | H1' | 113.4° | 110.4° |
| C1' | C2' | O2' | 108.3° | 110.8° |
| C1' | C2' | C3' | 103.7° | 104.0° |
| C1' | C2' | H2' | 115.5° | 110.4° |
| O4' | C1' | H1' | 111.9° | 110.4° |
| C1' | O4' | C4' | 108.4° | 105.2° |
| O2' | C2' | C3' | 113.7° | 110.5° |
| O2' | C2' | H2' | 105.7° | 110.5° |
| C2' | O2' | HO2' | 108.3° | 106.8° |
| C3' | C2' | H2' | 110.2° | 110.5° |
| C2' | C3' | C4' | 104.7° | 104.1° |
| C2' | C3' | O3' | 113.5° | 110.5° |
| C2' | C3' | H3' | 108.7° | 110.6° |
| C4' | C3' | O3' | 105.0° | 110.5° |
| C4' | C3' | H3' | 116.7° | 110.5° |
| C3' | C4' | O4' | 106.7° | 104.8° |
| C3' | C4' | C5' | 105.6° | 110.5° |
| C3' | C4' | H4' | 114.6° | 110.4° |
| O3' | C3' | H3' | 108.5° | 110.5° |
| C3' | O3' | HO3' | 113.4° | 106.7° |
| O4' | C4' | C5' | 112.0° | 110.3° |
| O4' | C4' | H4' | 108.5° | 110.4° |
| C5' | C4' | H4' | 109.5° | 110.3° |
| C4' | C5' | O5' | 109.3° | 109.5° |
| C4' | C5' | H5'1 | 112.3° | 109.4° |
| C4' | C5' | H5'2 | 112.3° | 109.4° |
| O5' | C5' | H5'1 | 112.3° | 109.5° |
| O5' | C5' | H5'2 | 112.3° | 109.5° |
| C5' | O5' | PA | 125.0° | 106.8° |
| H5'1 | C5' | H5'2 | 98.1° | 109.5° |
| O5' | PA | O1A | 108.1° | 109.4° |
| O5' | PA | O2A | 104.4° | 109.5° |
| O5' | PA | O3A | 107.3° | 109.6° |
| O1A | PA | O2A | 109.8° | 109.4° |
| O1A | PA | O3A | 112.7° | 109.5° |
| O2A | PA | O3A | 114.0° | 109.4° |
| PA | O2A | HOA2 | 104.4° | 106.8° |
| PA | O3A | PB | 119.6° | 106.8° |
| O3A | PB | O1B | 105.9° | 109.5° |
| O3A | PB | O2B | 110.2° | 109.5° |
| O3A | PB | O3B | 110.4° | 109.5° |
| O1B | PB | O2B | 110.6° | 109.5° |
| O1B | PB | O3B | 106.5° | 109.5° |
| O2B | PB | O3B | 113.0° | 109.4° |
| PB | O2B | HOB2 | 110.2° | 106.9° |
| PB | O3B | PG | 120.7° | 106.8° |
| O3B | PG | O1G | 107.1° | 109.5° |
| O3B | PG | O2G | 105.8° | 109.5° |
| O3B | PG | O3G | 109.3° | 109.4° |
| O1G | PG | O2G | 111.0° | 109.5° |
| O1G | PG | O3G | 110.1° | 109.5° |
| O2G | PG | O3G | 113.3° | 109.4° |
| PG | O2G | HOG2 | 105.9° | 106.8° |
| PG | O3G | HOG3 | 109.3° | 106.9° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| C2 | N1 | C6 | C1' | 177.1° | 180.0° |
| N1 | C2 | N3 | O2 | 179.9° | 180.0° |
| N1 | C2 | N3 | C4 | 0.0° | 0.0° |
| C2 | N1 | C6 | C5 | 0.8° | 0.3° |
| C2 | N1 | C6 | H6 | 179.2° | 180.0° |
| C2 | N1 | C1' | C2' | 105.2° | 58.5° |
| C2 | N1 | C1' | O4' | 139.9° | 57.0° |
| C2 | N1 | C1' | H1' | 17.8° | 179.3° |
| C6 | N1 | C2 | N3 | 0.7° | 0.0° |
| C6 | N1 | C2 | O2 | 179.2° | 180.0° |
| N1 | C6 | C5 | C4 | 0.2° | 0.5° |
| N1 | C6 | C5 | H6 | 180.0° | 179.7° |
| N1 | C6 | C5 | H5 | 179.8° | 180.0° |
| C6 | N1 | C1' | C2' | 71.7° | 121.6° |
| C6 | N1 | C1' | O4' | 43.2° | 123.0° |
| C6 | N1 | C1' | H1' | 165.3° | 0.7° |
| C1' | N1 | C2 | N3 | 176.4° | 180.0° |
| C1' | N1 | C2 | O2 | 3.7° | 0.0° |
| C1' | N1 | C6 | C5 | 176.3° | 179.7° |
| C1' | N1 | C6 | H6 | 3.7° | 0.1° |
| N1 | C1' | C2' | O4' | 119.7° | 118.9° |
| N1 | C1' | C2' | H1' | 118.6° | 122.2° |
| N1 | C1' | O4' | H1' | 118.6° | 122.3° |
| N1 | C1' | C2' | O2' | 85.0° | 98.5° |
| N1 | C1' | C2' | C3' | 154.0° | 142.7° |
| N1 | C1' | C2' | H2' | 33.3° | 24.2° |
| N1 | C1' | O4' | C4' | 153.3° | 159.3° |
| C2 | N3 | C4 | C5 | 0.6° | 0.2° |
| C2 | N3 | C4 | N4 | 179.5° | 179.9° |
| O2 | C2 | N3 | C4 | 179.8° | 180.0° |
| N3 | C4 | C5 | N4 | 179.9° | 179.7° |
| N3 | C4 | C5 | C6 | 0.5° | 0.5° |
| N3 | C4 | C5 | H5 | 179.5° | 180.0° |
| N3 | C4 | N4 | HN41 | 179.9° | 0.0° |
| N3 | C4 | N4 | HN42 | 54.7° | 179.7° |
| C4 | C5 | C6 | H5 | 180.0° | 179.5° |
| C4 | C5 | C6 | H6 | 179.8° | 179.7° |
| C5 | C4 | N4 | HN41 | 0.2° | 179.7° |
| C5 | C4 | N4 | HN42 | 125.1° | 0.6° |
| N4 | C4 | C5 | C6 | 179.6° | 179.8° |
| N4 | C4 | C5 | H5 | 0.4° | 0.3° |
| C4 | N4 | HN41 | HN42 | 125.3° | 179.7° |
| H5 | C5 | C6 | H6 | 0.2° | 0.3° |
| C2' | C1' | O4' | H1' | 122.7° | 118.9° |
| C1' | C2' | O2' | C3' | 114.7° | 114.7° |
| C1' | C2' | O2' | H2' | 124.3° | 122.6° |
| C1' | C2' | C3' | H2' | 124.1° | 118.4° |
| C1' | C2' | O2' | HO2' | 180.0° | 176.2° |
| C1' | C2' | C3' | C4' | 21.5° | 0.2° |
| C1' | C2' | C3' | O3' | 92.4° | 118.8° |
| C1' | C2' | C3' | H3' | 146.9° | 118.6° |
| C2' | C1' | O4' | C4' | 34.6° | 40.5° |
| O4' | C1' | C2' | O2' | 155.4° | 142.6° |
| O4' | C1' | C2' | C3' | 34.3° | 23.9° |
| O4' | C1' | C2' | H2' | 86.3° | 94.7° |
| C1' | O4' | C4' | C3' | 20.9° | 40.6° |
| C1' | O4' | C4' | C5' | 136.0° | 159.5° |
| C1' | O4' | C4' | H4' | 103.0° | 78.3° |
| H1' | C1' | C2' | O2' | 33.6° | 23.7° |
| H1' | C1' | C2' | C3' | 87.4° | 95.0° |
| H1' | C1' | C2' | H2' | 151.9° | 146.4° |
| H1' | C1' | O4' | C4' | 88.1° | 78.4° |
| O2' | C2' | C3' | H2' | 118.5° | 122.6° |
| O2' | C2' | C3' | C4' | 138.9° | 118.8° |
| O2' | C2' | C3' | O3' | 25.0° | 0.2° |
| O2' | C2' | C3' | H3' | 95.7° | 122.5° |
| C3' | C2' | O2' | HO2' | 65.4° | 61.4° |
| C2' | C3' | C4' | O3' | 119.7° | 118.7° |
| C2' | C3' | C4' | H3' | 120.2° | 118.8° |
| C2' | C3' | O3' | H3' | 120.9° | 122.7° |
| C2' | C3' | C4' | O4' | 1.6° | 24.1° |
| C2' | C3' | C4' | C5' | 117.8° | 143.0° |
| C2' | C3' | C4' | H4' | 121.7° | 94.7° |
| C2' | C3' | O3' | HO3' | 179.9° | 65.4° |
| H2' | C2' | O2' | HO2' | 55.7° | 61.2° |
| H2' | C2' | C3' | C4' | 102.6° | 118.6° |
| H2' | C2' | C3' | O3' | 143.5° | 122.8° |
| H2' | C2' | C3' | H3' | 22.8° | 0.1° |
| C4' | C3' | O3' | H3' | 125.4° | 122.6° |
| C3' | C4' | O4' | C5' | 115.1° | 119.0° |
| C3' | C4' | O4' | H4' | 124.0° | 118.9° |
| C3' | C4' | C5' | H4' | 123.8° | 122.4° |
| C4' | C3' | O3' | HO3' | 66.4° | 180.0° |
| C3' | C4' | C5' | O5' | 115.2° | 176.9° |
| C3' | C4' | C5' | H5'1 | 119.5° | 63.1° |
| C3' | C4' | C5' | H5'2 | 10.0° | 56.9° |
| O3' | C3' | C4' | O4' | 118.2° | 142.8° |
| O3' | C3' | C4' | C5' | 122.5° | 98.4° |
| O3' | C3' | C4' | H4' | 2.0° | 23.9° |
| H3' | C3' | C4' | O4' | 121.7° | 94.6° |
| H3' | C3' | C4' | C5' | 2.4° | 24.2° |
| H3' | C3' | C4' | H4' | 118.1° | 146.5° |
| H3' | C3' | O3' | HO3' | 59.1° | 57.4° |
| O4' | C4' | C5' | H4' | 120.4° | 122.2° |
| O4' | C4' | C5' | O5' | 0.5° | 61.4° |
| O4' | C4' | C5' | H5'1 | 124.8° | 178.5° |
| O4' | C4' | C5' | H5'2 | 125.8° | 58.6° |
| C4' | C5' | O5' | H5'1 | 125.3° | 120.0° |
| C4' | C5' | O5' | H5'2 | 125.3° | 120.0° |
| C4' | C5' | H5'1 | H5'2 | 118.2° | 120.0° |
| C4' | C5' | O5' | PA | 130.0° | 180.0° |
| H4' | C4' | C5' | O5' | 120.9° | 60.8° |
| H4' | C4' | C5' | H5'1 | 4.3° | 59.3° |
| H4' | C4' | C5' | H5'2 | 113.8° | 179.3° |
| O5' | C5' | H5'1 | H5'2 | 118.2° | 120.0° |
| C5' | O5' | PA | O1A | 21.8° | 60.0° |
| C5' | O5' | PA | O2A | 95.0° | 59.9° |
| C5' | O5' | PA | O3A | 143.7° | 180.0° |
| H5'1 | C5' | O5' | PA | 104.6° | 60.0° |
| H5'2 | C5' | O5' | PA | 4.8° | 60.0° |
| O5' | PA | O1A | O2A | 113.3° | 119.9° |
| O5' | PA | O1A | O3A | 118.4° | 120.1° |
| O5' | PA | O2A | O3A | 116.8° | 120.1° |
| O5' | PA | O2A | HOA2 | 180.0° | 60.0° |
| O5' | PA | O3A | PB | 143.4° | 180.0° |
| O1A | PA | O2A | O3A | 127.5° | 120.0° |
| O1A | PA | O2A | HOA2 | 64.3° | 180.0° |
| O1A | PA | O3A | PB | 24.5° | 60.0° |
| O2A | PA | O3A | PB | 101.5° | 60.0° |
| O3A | PA | O2A | HOA2 | 63.2° | 60.0° |
| PA | O3A | PB | O1B | 176.9° | 60.0° |
| PA | O3A | PB | O2B | 63.4° | 60.1° |
| PA | O3A | PB | O3B | 62.0° | 180.0° |
| O3A | PB | O1B | O2B | 119.4° | 120.0° |
| O3A | PB | O1B | O3B | 117.5° | 120.0° |
| O3A | PB | O2B | O3B | 124.0° | 120.0° |
| O3A | PB | O2B | HOB2 | 180.0° | 60.0° |
| O3A | PB | O3B | PG | 156.9° | 180.0° |
| O1B | PB | O2B | O3B | 119.2° | 120.0° |
| O1B | PB | O2B | HOB2 | 63.2° | 180.0° |
| O1B | PB | O3B | PG | 88.6° | 60.0° |
| O2B | PB | O3B | PG | 33.0° | 60.0° |
| O3B | PB | O2B | HOB2 | 56.0° | 60.0° |
| PB | O3B | PG | O1G | 62.8° | 60.0° |
| PB | O3B | PG | O2G | 178.7° | 180.0° |
| PB | O3B | PG | O3G | 56.4° | 60.1° |
| O3B | PG | O1G | O2G | 115.1° | 120.0° |
| O3B | PG | O1G | O3G | 118.7° | 120.0° |
| O3B | PG | O2G | O3G | 119.7° | 119.9° |
| O3B | PG | O2G | HOG2 | 180.0° | 180.0° |
| O3B | PG | O3G | HOG3 | 180.0° | 60.0° |
| O1G | PG | O2G | O3G | 124.5° | 120.1° |
| O1G | PG | O2G | HOG2 | 64.1° | 60.0° |
| O1G | PG | O3G | HOG3 | 62.7° | 180.0° |
| O2G | PG | O3G | HOG3 | 62.3° | 60.0° |
| O3G | PG | O2G | HOG2 | 60.3° | 60.1° |
