CTG
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
P | O5' | sing | 1.62Å | 1.59Å | |
P | OP1 | doub | 1.50Å | 1.49Å | |
P | OP3 | sing | 1.62Å | 162.49Å | |
P | OP2 | sing | 1.62Å | 1.49Å | |
OP2 | HOP2 | sing | 0.98Å | 0.95Å | |
O5' | C5' | sing | 1.42Å | 1.43Å | |
C5' | C4' | sing | 1.52Å | 1.51Å | |
C5' | H5' | sing | 1.09Å | 1.10Å | |
C5' | H5'' | sing | 1.09Å | 1.10Å | |
C4' | C3' | sing | 1.52Å | 1.52Å | |
C4' | O4' | sing | 1.44Å | 1.46Å | |
C4' | H4' | sing | 1.09Å | 1.10Å | |
O4' | C1' | sing | 1.43Å | 1.42Å | |
C1' | N1 | sing | 1.43Å | 1.48Å | |
C1' | C2' | sing | 1.52Å | 1.53Å | |
C1' | H1' | sing | 1.10Å | 1.10Å | |
N1 | C2 | sing | 1.40Å | 1.38Å | |
N1 | C6 | sing | 1.46Å | 1.46Å | |
C6 | C5 | sing | 1.53Å | 1.54Å | |
C6 | O6 | sing | 1.43Å | 1.43Å | |
C6 | H6 | sing | 1.10Å | 1.10Å | |
O6 | HO6 | sing | 0.97Å | 0.95Å | |
C2 | N3 | sing | 1.40Å | 1.37Å | |
C2 | O2 | doub | 1.23Å | 1.22Å | |
N3 | C4 | sing | 1.39Å | 1.38Å | |
N3 | H3 | sing | 1.02Å | 1.00Å | |
C4 | C5 | sing | 1.52Å | 1.54Å | |
C4 | O4 | doub | 1.23Å | 1.23Å | |
C5 | C5M | sing | 1.53Å | 1.52Å | |
C5 | O5 | sing | 1.42Å | 1.43Å | |
C5M | H71 | sing | 1.09Å | 1.10Å | |
C5M | H72 | sing | 1.09Å | 1.10Å | |
C5M | H73 | sing | 1.09Å | 1.10Å | |
O5 | HO5 | sing | 0.97Å | 0.95Å | |
C2' | C3' | sing | 1.51Å | 1.53Å | |
C2' | H2' | sing | 1.10Å | 1.10Å | |
C2' | H2'' | sing | 1.09Å | 1.10Å | |
C3' | O3' | sing | 1.43Å | 1.42Å | |
C3' | H3' | sing | 1.09Å | 1.10Å | |
O3' | HO3' | sing | 0.97Å | 0.95Å | |
OP3 | HOP3 | sing | 0.98Å | 0.00Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O5' | P | OP1 | 107.0° | 115.0° |
O5' | P | OP3 | 85.3° | 103.7° |
O5' | P | OP2 | 109.2° | 102.9° |
P | O5' | C5' | 119.6° | 118.5° |
OP1 | P | OP3 | 143.0° | 115.3° |
OP1 | P | OP2 | 119.8° | 115.0° |
OP3 | P | OP2 | 86.5° | 103.3° |
P | OP3 | HOP3 | 90.0° | 118.9° |
P | OP2 | HOP2 | 109.5° | 118.9° |
O5' | C5' | C4' | 111.3° | 108.9° |
O5' | C5' | H5' | 108.9° | 109.0° |
O5' | C5' | H5'' | 108.5° | 108.9° |
C4' | C5' | H5' | 108.9° | 110.3° |
C4' | C5' | H5'' | 108.5° | 110.3° |
C5' | C4' | C3' | 112.4° | 112.9° |
C5' | C4' | O4' | 109.8° | 107.9° |
C5' | C4' | H4' | 106.2° | 109.5° |
H5' | C5' | H5'' | 110.9° | 109.3° |
C3' | C4' | O4' | 106.0° | 106.2° |
C3' | C4' | H4' | 110.0° | 112.2° |
C4' | C3' | C2' | 106.3° | 103.1° |
C4' | C3' | O3' | 115.9° | 109.9° |
C4' | C3' | H3' | 112.4° | 113.5° |
O4' | C4' | H4' | 112.5° | 107.9° |
C4' | O4' | C1' | 110.6° | 109.3° |
O4' | C1' | N1 | 109.4° | 109.3° |
O4' | C1' | C2' | 109.4° | 107.4° |
O4' | C1' | H1' | 111.7° | 108.0° |
N1 | C1' | C2' | 115.1° | 112.8° |
N1 | C1' | H1' | 105.5° | 107.8° |
C1' | N1 | C2 | 115.1° | 120.9° |
C1' | N1 | C6 | 118.0° | 117.4° |
C2' | C1' | H1' | 105.6° | 111.5° |
C1' | C2' | C3' | 102.7° | 102.5° |
C1' | C2' | H2' | 111.8° | 110.6° |
C1' | C2' | H2'' | 113.2° | 111.7° |
C2 | N1 | C6 | 121.0° | 121.1° |
N1 | C2 | N3 | 114.4° | 114.8° |
N1 | C2 | O2 | 123.1° | 124.3° |
N1 | C6 | C5 | 109.2° | 111.5° |
N1 | C6 | O6 | 112.3° | 108.4° |
N1 | C6 | H6 | 107.7° | 109.1° |
C5 | C6 | O6 | 109.3° | 110.5° |
C5 | C6 | H6 | 110.8° | 110.1° |
C6 | C5 | C4 | 107.0° | 109.9° |
C6 | C5 | C5M | 110.3° | 111.7° |
C6 | C5 | O5 | 109.6° | 108.9° |
O6 | C6 | H6 | 107.6° | 107.0° |
C6 | O6 | HO6 | 109.5° | 106.4° |
N3 | C2 | O2 | 122.4° | 121.0° |
C2 | N3 | C4 | 126.7° | 128.0° |
C2 | N3 | H3 | 116.7° | 115.9° |
C4 | N3 | H3 | 116.6° | 116.0° |
N3 | C4 | C5 | 115.0° | 113.9° |
N3 | C4 | O4 | 120.5° | 123.2° |
C5 | C4 | O4 | 124.6° | 122.9° |
C4 | C5 | C5M | 110.4° | 109.1° |
C4 | C5 | O5 | 110.0° | 108.9° |
C5M | C5 | O5 | 109.4° | 108.4° |
C5 | C5M | H71 | 109.5° | 110.6° |
C5 | C5M | H72 | 109.5° | 110.5° |
C5 | C5M | H73 | 109.5° | 110.5° |
C5 | O5 | HO5 | 109.5° | 106.8° |
H71 | C5M | H72 | 109.5° | 108.3° |
H71 | C5M | H73 | 109.4° | 108.4° |
H72 | C5M | H73 | 109.5° | 108.3° |
C3' | C2' | H2' | 111.8° | 109.7° |
C3' | C2' | H2'' | 113.2° | 114.1° |
C2' | C3' | O3' | 120.4° | 109.7° |
C2' | C3' | H3' | 106.6° | 113.2° |
H2' | C2' | H2'' | 104.4° | 108.3° |
O3' | C3' | H3' | 94.3° | 107.4° |
C3' | O3' | HO3' | 109.5° | 107.2° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O5' | P | OP1 | OP3 | 105.3° | 120.6° |
O5' | P | OP1 | OP2 | 124.8° | 119.3° |
O5' | P | OP3 | OP2 | 109.6° | 107.1° |
O5' | P | OP2 | HOP2 | 106.7° | 173.8° |
P | O5' | C5' | C4' | 178.2° | 180.0° |
P | O5' | C5' | H5' | 61.9° | 59.6° |
P | O5' | C5' | H5'' | 58.9° | 59.6° |
O5' | P | OP3 | HOP3 | 90.0° | 175.4° |
OP1 | P | OP3 | OP2 | 138.2° | 126.3° |
OP1 | P | OP2 | HOP2 | 129.5° | 48.0° |
OP1 | P | O5' | C5' | 68.1° | 179.9° |
OP1 | P | OP3 | HOP3 | 90.0° | 48.8° |
OP3 | P | OP2 | HOP2 | 22.9° | 78.5° |
OP3 | P | O5' | C5' | 76.2° | 53.2° |
OP2 | P | O5' | C5' | 160.8° | 54.2° |
OP2 | P | OP3 | HOP3 | 90.0° | 77.5° |
O5' | C5' | C4' | H5' | 120.0° | 119.6° |
O5' | C5' | C4' | H5'' | 119.2° | 119.5° |
O5' | C5' | H5' | H5'' | 119.3° | 119.0° |
O5' | C5' | C4' | C3' | 30.6° | 179.5° |
O5' | C5' | C4' | O4' | 87.2° | 62.4° |
O5' | C5' | C4' | H4' | 150.9° | 54.7° |
C4' | C5' | H5' | H5'' | 119.2° | 121.5° |
C5' | C4' | C3' | O4' | 120.0° | 118.1° |
C5' | C4' | C3' | H4' | 118.1° | 124.3° |
C5' | C4' | O4' | H4' | 118.1° | 118.2° |
C5' | C4' | O4' | C1' | 112.5° | 108.6° |
C5' | C4' | C3' | C2' | 100.2° | 88.8° |
C5' | C4' | C3' | O3' | 123.0° | 154.2° |
C5' | C4' | C3' | H3' | 16.1° | 34.0° |
H5' | C5' | C4' | C3' | 89.4° | 60.0° |
H5' | C5' | C4' | O4' | 152.8° | 57.1° |
H5' | C5' | C4' | H4' | 30.9° | 174.3° |
H5'' | C5' | C4' | C3' | 149.8° | 61.0° |
H5'' | C5' | C4' | O4' | 32.1° | 178.1° |
H5'' | C5' | C4' | H4' | 89.9° | 64.8° |
C3' | C4' | O4' | H4' | 120.3° | 120.5° |
C3' | C4' | O4' | C1' | 9.1° | 12.7° |
C4' | C3' | C2' | C1' | 22.1° | 33.4° |
C4' | C3' | C2' | O3' | 134.4° | 117.1° |
C4' | C3' | C2' | H3' | 120.1° | 123.0° |
C4' | C3' | C2' | H2' | 142.1° | 84.1° |
C4' | C3' | C2' | H2'' | 100.4° | 154.3° |
C4' | C3' | O3' | H3' | 117.4° | 123.9° |
C4' | C3' | O3' | HO3' | 166.9° | 132.5° |
C4' | O4' | C1' | N1 | 132.2° | 131.7° |
C4' | O4' | C1' | C2' | 5.3° | 9.0° |
C4' | O4' | C1' | H1' | 111.3° | 111.3° |
O4' | C4' | C3' | C2' | 19.8° | 29.2° |
O4' | C4' | C3' | O3' | 117.0° | 87.7° |
O4' | C4' | C3' | H3' | 136.1° | 152.1° |
H4' | C4' | O4' | C1' | 129.4° | 133.2° |
H4' | C4' | C3' | C2' | 141.7° | 146.9° |
H4' | C4' | C3' | O3' | 4.9° | 29.9° |
H4' | C4' | C3' | H3' | 102.0° | 90.3° |
O4' | C1' | N1 | C2' | 123.7° | 119.4° |
O4' | C1' | N1 | H1' | 120.3° | 117.1° |
O4' | C1' | C2' | H1' | 120.3° | 118.1° |
O4' | C1' | N1 | C2 | 128.0° | 177.1° |
O4' | C1' | N1 | C6 | 78.7° | 11.3° |
O4' | C1' | C2' | C3' | 17.1° | 26.9° |
O4' | C1' | C2' | H2' | 137.1° | 90.0° |
O4' | C1' | C2' | H2'' | 105.3° | 149.4° |
N1 | C1' | C2' | H1' | 116.0° | 121.4° |
C1' | N1 | C2 | C6 | 152.4° | 171.3° |
C1' | N1 | C6 | C5 | 163.1° | 148.8° |
C1' | N1 | C6 | O6 | 75.6° | 89.3° |
C1' | N1 | C6 | H6 | 42.7° | 26.9° |
C1' | N1 | C2 | N3 | 158.0° | 179.9° |
C1' | N1 | C2 | O2 | 22.0° | 0.2° |
N1 | C1' | C2' | C3' | 140.8° | 147.4° |
N1 | C1' | C2' | H2' | 99.2° | 30.6° |
N1 | C1' | C2' | H2'' | 18.4° | 90.1° |
C2' | C1' | N1 | C2 | 108.4° | 63.5° |
C2' | C1' | N1 | C6 | 44.9° | 108.1° |
C1' | C2' | C3' | H2' | 120.0° | 117.5° |
C1' | C2' | C3' | H2'' | 122.5° | 120.8° |
C1' | C2' | H2' | H2'' | 122.8° | 122.7° |
C1' | C2' | C3' | O3' | 112.4° | 83.6° |
C1' | C2' | C3' | H3' | 142.1° | 156.4° |
H1' | C1' | N1 | C2 | 7.7° | 60.0° |
H1' | C1' | N1 | C6 | 161.0° | 128.4° |
H1' | C1' | C2' | C3' | 103.2° | 91.2° |
H1' | C1' | C2' | H2' | 16.8° | 151.9° |
H1' | C1' | C2' | H2'' | 134.4° | 31.3° |
C2 | N1 | C6 | C5 | 45.2° | 39.6° |
C2 | N1 | C6 | O6 | 76.1° | 82.3° |
C2 | N1 | C6 | H6 | 165.6° | 161.5° |
N1 | C2 | N3 | O2 | 180.0° | 179.9° |
N1 | C2 | N3 | C4 | 23.6° | 9.3° |
N1 | C2 | N3 | H3 | 156.4° | 171.5° |
N1 | C6 | C5 | O6 | 123.2° | 120.7° |
N1 | C6 | C5 | H6 | 118.4° | 121.3° |
N1 | C6 | O6 | H6 | 118.3° | 117.6° |
N1 | C6 | O6 | HO6 | 163.2° | 35.6° |
C6 | N1 | C2 | N3 | 5.6° | 8.6° |
C6 | N1 | C2 | O2 | 174.4° | 171.5° |
N1 | C6 | C5 | C4 | 55.6° | 52.2° |
N1 | C6 | C5 | C5M | 64.6° | 69.1° |
N1 | C6 | C5 | O5 | 174.8° | 171.4° |
C5 | C6 | O6 | H6 | 120.4° | 119.9° |
C5 | C6 | O6 | HO6 | 75.5° | 158.1° |
C6 | C5 | C4 | N3 | 32.5° | 36.9° |
C6 | C5 | C4 | C5M | 120.2° | 122.7° |
C6 | C5 | C4 | O5 | 119.0° | 119.2° |
C6 | C5 | C4 | O4 | 147.6° | 144.7° |
C6 | C5 | C5M | O5 | 120.7° | 119.9° |
C6 | C5 | C5M | H71 | 77.7° | 166.9° |
C6 | C5 | C5M | H72 | 42.4° | 46.9° |
C6 | C5 | C5M | H73 | 162.4° | 73.0° |
C6 | C5 | O5 | HO5 | 111.7° | 177.9° |
O6 | C6 | C5 | C4 | 67.6° | 68.5° |
O6 | C6 | C5 | C5M | 172.2° | 170.3° |
O6 | C6 | C5 | O5 | 51.6° | 50.7° |
H6 | C6 | O6 | HO6 | 44.9° | 82.0° |
H6 | C6 | C5 | C4 | 174.1° | 173.4° |
H6 | C6 | C5 | C5M | 53.8° | 52.2° |
H6 | C6 | C5 | O5 | 66.7° | 67.4° |
C2 | N3 | C4 | H3 | 180.0° | 179.3° |
C2 | N3 | C4 | C5 | 7.6° | 6.8° |
C2 | N3 | C4 | O4 | 172.3° | 174.9° |
O2 | C2 | N3 | C4 | 156.4° | 170.6° |
O2 | C2 | N3 | H3 | 23.6° | 8.6° |
N3 | C4 | C5 | O4 | 179.9° | 178.3° |
N3 | C4 | C5 | C5M | 87.7° | 85.8° |
N3 | C4 | C5 | O5 | 151.5° | 156.1° |
H3 | N3 | C4 | C5 | 172.4° | 172.5° |
H3 | N3 | C4 | O4 | 7.7° | 5.9° |
C4 | C5 | C5M | O5 | 121.2° | 118.5° |
C4 | C5 | C5M | H71 | 40.5° | 45.3° |
C4 | C5 | C5M | H72 | 160.5° | 74.8° |
C4 | C5 | C5M | H73 | 79.5° | 165.3° |
C4 | C5 | O5 | HO5 | 130.9° | 58.1° |
O4 | C4 | C5 | C5M | 92.2° | 92.6° |
O4 | C4 | C5 | O5 | 28.6° | 25.6° |
C5 | C5M | H71 | H72 | 120.0° | 121.3° |
C5 | C5M | H71 | H73 | 120.0° | 121.4° |
C5 | C5M | H72 | H73 | 120.0° | 121.3° |
C5M | C5 | O5 | HO5 | 9.5° | 60.5° |
O5 | C5 | C5M | H71 | 161.6° | 73.2° |
O5 | C5 | C5M | H72 | 78.3° | 166.8° |
O5 | C5 | C5M | H73 | 41.7° | 46.9° |
H71 | C5M | H72 | H73 | 120.0° | 117.4° |
C3' | C2' | H2' | H2'' | 122.7° | 125.1° |
C2' | C3' | O3' | H3' | 112.2° | 123.4° |
C2' | C3' | O3' | HO3' | 36.5° | 19.8° |
H2' | C2' | C3' | O3' | 7.6° | 158.9° |
H2' | C2' | C3' | H3' | 97.9° | 38.9° |
H2'' | C2' | C3' | O3' | 125.2° | 37.2° |
H2'' | C2' | C3' | H3' | 19.7° | 82.7° |
H3' | C3' | O3' | HO3' | 75.7° | 103.6° |