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Summary Geometry Related PDB entries

CPT

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
PT1	N1	sing	0.00Å	2.01Å
PT1	N2	sing	0.00Å	2.00Å
N1	H11	sing	0.00Å	1.00Å
N1	H12	sing	0.00Å	1.00Å
N1	H13	sing	0.00Å	1.00Å
N2	H21	sing	0.00Å	1.00Å
N2	H22	sing	0.00Å	1.00Å
N2	H23	sing	0.00Å	1.00Å
CL2	PT1	sing	0.00Å	1.23Å
CL1	PT1	sing	0.00Å	1.47Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
N1	PT1	N2	89.0°	90.0°
PT1	N1	H11	109.5°	90.0°
PT1	N1	H12	109.5°	90.0°
PT1	N1	H13	109.5°	90.0°
N1	PT1	CL2	170.3°	90.0°
N1	PT1	CL1	89.8°	90.0°
PT1	N2	H21	109.5°	90.0°
PT1	N2	H22	109.4°	90.0°
PT1	N2	H23	109.4°	90.0°
N2	PT1	CL2	100.5°	90.0°
N2	PT1	CL1	178.5°	90.0°
H11	N1	H12	109.5°	90.0°
H11	N1	H13	109.4°	90.0°
H12	N1	H13	109.5°	90.0°
H21	N2	H22	109.5°	90.0°
H21	N2	H23	109.5°	90.0°
H22	N2	H23	109.5°	90.0°
CL2	PT1	CL1	80.7°	90.0°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
N1	PT1	N2	CL2	178.3°	90.0°
N1	PT1	N2	CL1	37.9°	90.0°
PT1	N1	H11	H12	120.0°	90.0°
PT1	N1	H11	H13	120.0°	90.0°
PT1	N1	H12	H13	120.0°	90.0°
N1	PT1	N2	H21	180.0°	90.0°
N1	PT1	N2	H22	60.0°	90.0°
N1	PT1	N2	H23	60.0°	90.0°
N1	PT1	CL2	CL1	10.9°	90.0°
N2	PT1	N1	H11	180.0°	90.0°
N2	PT1	N1	H12	60.0°	90.0°
N2	PT1	N1	H13	60.0°	90.0°
PT1	N2	H21	H22	120.0°	90.0°
PT1	N2	H21	H23	120.0°	90.0°
PT1	N2	H22	H23	119.9°	90.0°
N2	PT1	CL2	CL1	179.1°	90.0°
H11	N1	H12	H13	119.9°	90.0°
H11	N1	PT1	CL2	9.9°	90.0°
H11	N1	PT1	CL1	0.9°	90.0°
H12	N1	PT1	CL2	110.1°	90.0°
H12	N1	PT1	CL1	120.9°	90.0°
H13	N1	PT1	CL2	129.9°	90.0°
H13	N1	PT1	CL1	119.0°	90.0°
H21	N2	H22	H23	120.0°	90.0°
H21	N2	PT1	CL2	1.7°	90.0°
H21	N2	PT1	CL1	142.1°	90.0°
H22	N2	PT1	CL2	121.7°	90.0°
H22	N2	PT1	CL1	22.1°	90.0°
H23	N2	PT1	CL2	118.3°	90.0°
H23	N2	PT1	CL1	97.9°	90.0°

246704

PDB entries from 2025-12-24

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