CPJ
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
O31 | C29 | sing | 1.34Å | 1.25Å | |
O31 | H31 | sing | 0.97Å | 0.95Å | |
C29 | O30 | doub | 1.21Å | 1.25Å | |
C29 | C26 | sing | 1.51Å | 1.51Å | |
C26 | O27 | sing | 1.43Å | 1.44Å | |
C26 | C32 | sing | 1.53Å | 1.53Å | |
C26 | O25 | sing | 1.43Å | 1.44Å | |
O27 | C28 | sing | 1.43Å | 1.43Å | |
C28 | C23 | sing | 1.53Å | 1.52Å | |
C28 | H281 | sing | 1.09Å | 1.11Å | |
C28 | H282 | sing | 1.09Å | 1.12Å | |
C32 | H321 | sing | 1.09Å | 1.12Å | |
C32 | H322 | sing | 1.09Å | 1.11Å | |
C32 | H323 | sing | 1.09Å | 1.11Å | |
O25 | C24 | sing | 1.43Å | 1.43Å | |
C24 | C23 | sing | 1.53Å | 1.52Å | |
C24 | H241 | sing | 1.09Å | 1.11Å | |
C24 | H242 | sing | 1.09Å | 1.11Å | |
C23 | O22 | sing | 1.45Å | 1.42Å | |
C23 | H23 | sing | 1.09Å | 1.12Å | |
O22 | C20 | sing | 1.35Å | 1.46Å | |
C20 | O21 | doub | 1.22Å | 1.23Å | |
C20 | N17 | sing | 1.35Å | 1.34Å | |
N17 | C16 | sing | 1.47Å | 1.45Å | |
N17 | H17 | sing | 0.97Å | 1.02Å | |
C16 | C15 | sing | 1.53Å | 1.52Å | |
C16 | H161 | sing | 1.09Å | 1.11Å | |
C16 | H162 | sing | 1.09Å | 1.12Å | |
C15 | N14 | sing | 1.47Å | 1.45Å | |
C15 | H151 | sing | 1.09Å | 1.11Å | |
C15 | H152 | sing | 1.09Å | 1.12Å | |
N14 | C12 | sing | 1.35Å | 1.33Å | |
N14 | H14 | sing | 0.97Å | 1.02Å | |
C12 | O13 | doub | 1.22Å | 1.23Å | |
C12 | O11 | sing | 1.35Å | 1.45Å | |
O11 | C3 | sing | 1.45Å | 1.43Å | |
C3 | C2 | sing | 1.53Å | 1.52Å | |
C3 | C4 | sing | 1.53Å | 1.53Å | |
C3 | H3 | sing | 1.09Å | 1.12Å | |
C2 | O1 | sing | 1.43Å | 1.43Å | |
C2 | H21 | sing | 1.09Å | 1.12Å | |
C2 | H22 | sing | 1.09Å | 1.11Å | |
O1 | C6 | sing | 1.43Å | 1.44Å | |
C4 | O5 | sing | 1.43Å | 1.43Å | |
C4 | H41 | sing | 1.09Å | 1.12Å | |
C4 | H42 | sing | 1.09Å | 1.12Å | |
O5 | C6 | sing | 1.43Å | 1.44Å | |
C6 | C10 | sing | 1.53Å | 1.53Å | |
C6 | C7 | sing | 1.51Å | 1.50Å | |
C10 | H101 | sing | 1.09Å | 1.11Å | |
C10 | H102 | sing | 1.09Å | 1.11Å | |
C10 | H103 | sing | 1.09Å | 1.11Å | |
C7 | O8 | sing | 1.34Å | 1.25Å | |
C7 | O9 | doub | 1.21Å | 1.25Å | |
O8 | HO8 | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C29 | O31 | H31 | 122.4° | 120.0° |
O31 | C29 | O30 | 122.5° | 120.0° |
O31 | C29 | C26 | 118.9° | 120.0° |
O30 | C29 | C26 | 118.6° | 120.0° |
C29 | C26 | O27 | 108.6° | 109.4° |
C29 | C26 | C32 | 107.7° | 109.3° |
C29 | C26 | O25 | 108.1° | 109.2° |
O27 | C26 | C32 | 110.3° | 109.3° |
O27 | C26 | O25 | 111.9° | 110.3° |
C26 | O27 | C28 | 115.6° | 107.2° |
C32 | C26 | O25 | 110.2° | 109.3° |
C26 | C32 | H321 | 107.7° | 109.4° |
C26 | C32 | H322 | 112.9° | 109.5° |
C26 | C32 | H323 | 112.9° | 109.4° |
C26 | O25 | C24 | 116.1° | 107.2° |
O27 | C28 | C23 | 109.5° | 109.1° |
O27 | C28 | H281 | 112.3° | 109.6° |
O27 | C28 | H282 | 112.2° | 109.5° |
C23 | C28 | H281 | 112.2° | 109.5° |
C23 | C28 | H282 | 112.2° | 109.5° |
C28 | C23 | C24 | 107.7° | 108.8° |
C28 | C23 | O22 | 107.1° | 109.6° |
C28 | C23 | H23 | 111.9° | 109.5° |
H281 | C28 | H282 | 98.2° | 109.6° |
H321 | C32 | H322 | 112.9° | 109.5° |
H321 | C32 | H323 | 112.8° | 109.5° |
H322 | C32 | H323 | 97.6° | 109.5° |
O25 | C24 | C23 | 109.1° | 109.1° |
O25 | C24 | H241 | 112.4° | 109.5° |
O25 | C24 | H242 | 112.4° | 109.5° |
C23 | C24 | H241 | 112.3° | 109.5° |
C23 | C24 | H242 | 112.3° | 109.6° |
C24 | C23 | O22 | 108.5° | 109.6° |
C24 | C23 | H23 | 110.5° | 109.6° |
H241 | C24 | H242 | 98.0° | 109.6° |
O22 | C23 | H23 | 111.1° | 109.7° |
C23 | O22 | C20 | 114.2° | 120.0° |
O22 | C20 | O21 | 120.0° | 120.0° |
O22 | C20 | N17 | 115.9° | 120.0° |
O21 | C20 | N17 | 124.1° | 120.0° |
C20 | N17 | C16 | 123.6° | 120.0° |
C20 | N17 | H17 | 113.9° | 120.0° |
C16 | N17 | H17 | 122.6° | 120.0° |
N17 | C16 | C15 | 110.5° | 109.4° |
N17 | C16 | H161 | 111.9° | 109.5° |
N17 | C16 | H162 | 111.9° | 109.4° |
C15 | C16 | H161 | 111.8° | 109.5° |
C15 | C16 | H162 | 111.8° | 109.5° |
C16 | C15 | N14 | 112.8° | 109.4° |
C16 | C15 | H151 | 111.0° | 109.5° |
C16 | C15 | H152 | 111.0° | 109.4° |
H161 | C16 | H162 | 98.6° | 109.5° |
N14 | C15 | H151 | 111.0° | 109.5° |
N14 | C15 | H152 | 111.0° | 109.5° |
C15 | N14 | C12 | 120.0° | 120.0° |
C15 | N14 | H14 | 124.2° | 120.0° |
H151 | C15 | H152 | 99.3° | 109.5° |
C12 | N14 | H14 | 115.7° | 120.0° |
N14 | C12 | O13 | 123.0° | 120.0° |
N14 | C12 | O11 | 117.2° | 120.0° |
O13 | C12 | O11 | 119.8° | 120.0° |
C12 | O11 | C3 | 111.5° | 120.0° |
O11 | C3 | C2 | 109.7° | 109.6° |
O11 | C3 | C4 | 108.3° | 109.6° |
O11 | C3 | H3 | 110.2° | 109.6° |
C2 | C3 | C4 | 109.7° | 108.8° |
C2 | C3 | H3 | 108.8° | 109.6° |
C3 | C2 | O1 | 109.3° | 109.1° |
C3 | C2 | H21 | 112.3° | 109.5° |
C3 | C2 | H22 | 112.2° | 109.6° |
C4 | C3 | H3 | 110.1° | 109.7° |
C3 | C4 | O5 | 109.4° | 109.1° |
C3 | C4 | H41 | 112.3° | 109.5° |
C3 | C4 | H42 | 112.3° | 109.5° |
O1 | C2 | H21 | 112.2° | 109.5° |
O1 | C2 | H22 | 112.3° | 109.6° |
C2 | O1 | C6 | 115.3° | 107.1° |
H21 | C2 | H22 | 98.2° | 109.6° |
O1 | C6 | O5 | 111.6° | 110.3° |
O1 | C6 | C10 | 111.3° | 109.4° |
O1 | C6 | C7 | 106.3° | 109.3° |
O5 | C4 | H41 | 112.2° | 109.5° |
O5 | C4 | H42 | 112.2° | 109.5° |
C4 | O5 | C6 | 114.8° | 107.1° |
H41 | C4 | H42 | 98.2° | 109.6° |
O5 | C6 | C10 | 110.6° | 109.3° |
O5 | C6 | C7 | 109.3° | 109.2° |
C10 | C6 | C7 | 107.7° | 109.3° |
C6 | C10 | H101 | 111.3° | 109.5° |
C6 | C10 | H102 | 111.6° | 109.5° |
C6 | C10 | H103 | 111.6° | 109.4° |
C6 | C7 | O8 | 119.7° | 120.0° |
C6 | C7 | O9 | 117.4° | 120.0° |
H101 | C10 | H102 | 111.5° | 109.5° |
H101 | C10 | H103 | 111.5° | 109.4° |
H102 | C10 | H103 | 98.9° | 109.5° |
O8 | C7 | O9 | 122.9° | 120.0° |
C7 | O8 | HO8 | 119.7° | 120.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O31 | C29 | O30 | C26 | 179.2° | 180.0° |
O31 | C29 | C26 | O27 | 43.9° | 174.7° |
O31 | C29 | C26 | C32 | 75.5° | 55.0° |
O31 | C29 | C26 | O25 | 165.4° | 64.5° |
H31 | O31 | C29 | O30 | 179.9° | 0.0° |
H31 | O31 | C29 | C26 | 0.9° | 180.0° |
O30 | C29 | C26 | O27 | 136.9° | 5.4° |
O30 | C29 | C26 | C32 | 103.6° | 125.0° |
O30 | C29 | C26 | O25 | 15.4° | 115.5° |
C29 | C26 | O27 | C32 | 117.8° | 119.6° |
C29 | C26 | O27 | O25 | 119.2° | 120.1° |
C29 | C26 | C32 | O25 | 117.7° | 119.4° |
C29 | C26 | O27 | C28 | 167.3° | 170.2° |
C29 | C26 | C32 | H321 | 180.0° | 60.1° |
C29 | C26 | C32 | H322 | 54.8° | 60.0° |
C29 | C26 | C32 | H323 | 54.8° | 180.0° |
C29 | C26 | O25 | C24 | 167.8° | 170.1° |
O27 | C26 | C32 | O25 | 124.0° | 120.9° |
C26 | O27 | C28 | C23 | 54.8° | 60.8° |
C26 | O27 | C28 | H281 | 179.9° | 179.3° |
C26 | O27 | C28 | H282 | 70.4° | 59.1° |
O27 | C26 | C32 | H321 | 61.7° | 59.6° |
O27 | C26 | C32 | H322 | 63.6° | 179.6° |
O27 | C26 | C32 | H323 | 173.1° | 60.3° |
O27 | C26 | O25 | C24 | 48.3° | 69.7° |
C32 | C26 | O27 | C28 | 74.9° | 50.5° |
C26 | C32 | H321 | H322 | 125.3° | 120.0° |
C26 | C32 | H321 | H323 | 125.2° | 119.9° |
C26 | C32 | H322 | H323 | 118.8° | 120.0° |
C32 | C26 | O25 | C24 | 74.7° | 50.6° |
O25 | C26 | O27 | C28 | 48.1° | 69.7° |
O25 | C26 | C32 | H321 | 62.3° | 179.5° |
O25 | C26 | C32 | H322 | 172.4° | 59.5° |
O25 | C26 | C32 | H323 | 62.9° | 60.5° |
C26 | O25 | C24 | C23 | 55.0° | 60.8° |
C26 | O25 | C24 | H241 | 70.3° | 179.3° |
C26 | O25 | C24 | H242 | 179.8° | 59.1° |
O27 | C28 | C23 | H281 | 125.3° | 120.0° |
O27 | C28 | C23 | H282 | 125.3° | 119.9° |
O27 | C28 | H281 | H282 | 118.2° | 120.2° |
O27 | C28 | C23 | C24 | 58.6° | 54.5° |
O27 | C28 | C23 | O22 | 57.9° | 65.2° |
O27 | C28 | C23 | H23 | 179.8° | 174.3° |
C23 | C28 | H281 | H282 | 118.1° | 120.1° |
C28 | C23 | C24 | O25 | 58.3° | 54.5° |
C28 | C23 | C24 | O22 | 115.6° | 119.8° |
C28 | C23 | C24 | H23 | 122.5° | 119.8° |
C28 | C23 | C24 | H241 | 67.0° | 174.4° |
C28 | C23 | C24 | H242 | 176.4° | 65.3° |
C28 | C23 | O22 | H23 | 122.4° | 120.3° |
C28 | C23 | O22 | C20 | 83.2° | 150.0° |
H281 | C28 | C23 | C24 | 176.1° | 174.5° |
H281 | C28 | C23 | O22 | 67.4° | 54.7° |
H281 | C28 | C23 | H23 | 54.5° | 65.7° |
H282 | C28 | C23 | C24 | 66.7° | 65.3° |
H282 | C28 | C23 | O22 | 176.8° | 174.9° |
H282 | C28 | C23 | H23 | 54.9° | 54.4° |
H321 | C32 | H322 | H323 | 118.8° | 120.0° |
O25 | C24 | C23 | H241 | 125.3° | 119.9° |
O25 | C24 | C23 | H242 | 125.3° | 119.9° |
O25 | C24 | H241 | H242 | 118.3° | 120.2° |
O25 | C24 | C23 | O22 | 57.2° | 65.2° |
O25 | C24 | C23 | H23 | 179.2° | 174.3° |
C23 | C24 | H241 | H242 | 118.2° | 120.2° |
C24 | C23 | O22 | H23 | 121.6° | 120.4° |
C24 | C23 | O22 | C20 | 160.8° | 90.7° |
H241 | C24 | C23 | O22 | 177.5° | 54.6° |
H241 | C24 | C23 | H23 | 55.5° | 65.8° |
H242 | C24 | C23 | O22 | 68.1° | 174.9° |
H242 | C24 | C23 | H23 | 53.9° | 54.4° |
C23 | O22 | C20 | O21 | 1.1° | 0.0° |
C23 | O22 | C20 | N17 | 179.2° | 180.0° |
H23 | C23 | O22 | C20 | 39.2° | 29.7° |
O22 | C20 | O21 | N17 | 179.6° | 180.0° |
O22 | C20 | N17 | C16 | 179.7° | 180.0° |
O22 | C20 | N17 | H17 | 0.2° | 0.0° |
O21 | C20 | N17 | C16 | 0.1° | 0.0° |
O21 | C20 | N17 | H17 | 179.9° | 180.0° |
C20 | N17 | C16 | H17 | 180.0° | 180.0° |
C20 | N17 | C16 | C15 | 71.7° | 180.0° |
C20 | N17 | C16 | H161 | 163.0° | 60.1° |
C20 | N17 | C16 | H162 | 53.5° | 60.0° |
N17 | C16 | C15 | H161 | 125.3° | 120.0° |
N17 | C16 | C15 | H162 | 125.3° | 119.9° |
N17 | C16 | H161 | H162 | 117.8° | 120.0° |
N17 | C16 | C15 | N14 | 177.3° | 180.0° |
N17 | C16 | C15 | H151 | 52.0° | 60.0° |
N17 | C16 | C15 | H152 | 57.4° | 60.0° |
H17 | N17 | C16 | C15 | 108.2° | 0.0° |
H17 | N17 | C16 | H161 | 17.0° | 120.0° |
H17 | N17 | C16 | H162 | 126.5° | 120.0° |
C15 | C16 | H161 | H162 | 117.7° | 120.0° |
C16 | C15 | N14 | H151 | 125.3° | 120.0° |
C16 | C15 | N14 | H152 | 125.3° | 119.9° |
C16 | C15 | H151 | H152 | 116.9° | 120.0° |
C16 | C15 | N14 | C12 | 119.8° | 180.0° |
C16 | C15 | N14 | H14 | 60.2° | 0.0° |
H161 | C16 | C15 | N14 | 57.4° | 60.0° |
H161 | C16 | C15 | H151 | 177.3° | 180.0° |
H161 | C16 | C15 | H152 | 67.8° | 59.9° |
H162 | C16 | C15 | N14 | 52.1° | 60.1° |
H162 | C16 | C15 | H151 | 73.2° | 59.9° |
H162 | C16 | C15 | H152 | 177.3° | 180.0° |
N14 | C15 | H151 | H152 | 116.8° | 120.1° |
C15 | N14 | C12 | H14 | 180.0° | 180.0° |
C15 | N14 | C12 | O13 | 0.6° | 0.0° |
C15 | N14 | C12 | O11 | 179.3° | 180.0° |
H151 | C15 | N14 | C12 | 114.9° | 60.1° |
H151 | C15 | N14 | H14 | 65.1° | 120.0° |
H152 | C15 | N14 | C12 | 5.5° | 60.0° |
H152 | C15 | N14 | H14 | 174.5° | 120.0° |
N14 | C12 | O13 | O11 | 179.9° | 179.9° |
N14 | C12 | O11 | C3 | 179.7° | 180.0° |
H14 | N14 | C12 | O13 | 179.5° | 180.0° |
H14 | N14 | C12 | O11 | 0.6° | 0.1° |
O13 | C12 | O11 | C3 | 0.2° | 0.0° |
C12 | O11 | C3 | C2 | 106.5° | 150.0° |
C12 | O11 | C3 | C4 | 133.8° | 90.7° |
C12 | O11 | C3 | H3 | 13.3° | 29.7° |
O11 | C3 | C2 | C4 | 118.9° | 119.8° |
O11 | C3 | C2 | H3 | 120.6° | 120.2° |
O11 | C3 | C4 | H3 | 120.6° | 120.3° |
O11 | C3 | C2 | O1 | 64.0° | 174.4° |
O11 | C3 | C2 | H21 | 170.8° | 65.8° |
O11 | C3 | C2 | H22 | 61.3° | 54.4° |
O11 | C3 | C4 | O5 | 64.5° | 174.4° |
O11 | C3 | C4 | H41 | 60.8° | 54.5° |
O11 | C3 | C4 | H42 | 170.2° | 65.7° |
C2 | C3 | C4 | H3 | 119.7° | 119.9° |
C3 | C2 | O1 | H21 | 125.2° | 119.9° |
C3 | C2 | O1 | H22 | 125.2° | 119.9° |
C3 | C2 | H21 | H22 | 118.2° | 120.2° |
C3 | C2 | O1 | C6 | 54.6° | 60.9° |
C2 | C3 | C4 | O5 | 55.2° | 54.6° |
C2 | C3 | C4 | H41 | 179.5° | 65.3° |
C2 | C3 | C4 | H42 | 70.1° | 174.5° |
C4 | C3 | C2 | O1 | 54.9° | 54.6° |
C4 | C3 | C2 | H21 | 70.3° | 174.5° |
C4 | C3 | C2 | H22 | 179.8° | 65.3° |
C3 | C4 | O5 | H41 | 125.3° | 119.9° |
C3 | C4 | O5 | H42 | 125.3° | 119.9° |
C3 | C4 | H41 | H42 | 118.2° | 120.2° |
C3 | C4 | O5 | C6 | 54.8° | 60.8° |
H3 | C3 | C2 | O1 | 175.4° | 65.4° |
H3 | C3 | C2 | H21 | 50.2° | 54.5° |
H3 | C3 | C2 | H22 | 59.3° | 174.7° |
H3 | C3 | C4 | O5 | 174.9° | 65.3° |
H3 | C3 | C4 | H41 | 59.8° | 174.8° |
H3 | C3 | C4 | H42 | 49.7° | 54.6° |
O1 | C2 | H21 | H22 | 118.2° | 120.2° |
C2 | O1 | C6 | O5 | 52.5° | 69.8° |
C2 | O1 | C6 | C10 | 71.5° | 50.5° |
C2 | O1 | C6 | C7 | 171.5° | 170.2° |
H21 | C2 | O1 | C6 | 70.7° | 179.3° |
H22 | C2 | O1 | C6 | 179.8° | 59.1° |
O1 | C6 | O5 | C4 | 52.5° | 69.8° |
O1 | C6 | O5 | C10 | 124.4° | 120.3° |
O1 | C6 | O5 | C7 | 117.2° | 120.1° |
O1 | C6 | C10 | C7 | 116.1° | 119.7° |
O1 | C6 | C10 | H101 | 180.0° | 60.3° |
O1 | C6 | C10 | H102 | 54.8° | 179.6° |
O1 | C6 | C10 | H103 | 54.8° | 59.6° |
O1 | C6 | C7 | O8 | 137.6° | 175.1° |
O1 | C6 | C7 | O9 | 42.7° | 5.0° |
O5 | C4 | H41 | H42 | 118.1° | 120.2° |
C4 | O5 | C6 | C10 | 71.9° | 50.5° |
C4 | O5 | C6 | C7 | 169.7° | 170.1° |
H41 | C4 | O5 | C6 | 179.9° | 59.1° |
H42 | C4 | O5 | C6 | 70.5° | 179.3° |
O5 | C6 | C10 | C7 | 119.3° | 119.5° |
O5 | C6 | C10 | H101 | 55.4° | 60.5° |
O5 | C6 | C10 | H102 | 69.8° | 59.5° |
O5 | C6 | C10 | H103 | 179.3° | 179.6° |
O5 | C6 | C7 | O8 | 17.1° | 64.2° |
O5 | C6 | C7 | O9 | 163.2° | 115.7° |
C6 | C10 | H101 | H102 | 125.2° | 120.0° |
C6 | C10 | H101 | H103 | 125.3° | 119.9° |
C6 | C10 | H102 | H103 | 117.5° | 120.0° |
C10 | C6 | C7 | O8 | 103.0° | 55.4° |
C10 | C6 | C7 | O9 | 76.7° | 124.7° |
C7 | C6 | C10 | H101 | 63.9° | 180.0° |
C7 | C6 | C10 | H102 | 170.9° | 59.9° |
C7 | C6 | C10 | H103 | 61.3° | 60.1° |
C6 | C7 | O8 | O9 | 179.7° | 179.9° |
C6 | C7 | O8 | HO8 | 180.0° | 180.0° |
H101 | C10 | H102 | H103 | 117.4° | 120.0° |
O9 | C7 | O8 | HO8 | 0.3° | 0.1° |