Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N1 | C2 | doub | 1.32Å | 1.34Å | Aromatic |
N1 | C8A | sing | 1.33Å | 1.34Å | Aromatic |
C2 | NA2 | sing | 1.38Å | 1.32Å | |
C2 | N3 | sing | 1.33Å | 1.29Å | Aromatic |
NA2 | HN21 | sing | 0.97Å | 1.02Å | |
NA2 | HN22 | sing | 0.97Å | 1.02Å | |
N3 | C4 | doub | 1.33Å | 1.28Å | Aromatic |
C4 | N4 | sing | 1.38Å | 1.33Å | |
C4 | C4A | sing | 1.40Å | 1.33Å | Aromatic |
N4 | HN41 | sing | 0.97Å | 1.02Å | |
N4 | HN42 | sing | 0.97Å | 1.02Å | |
C4A | C6 | sing | 1.46Å | 1.46Å | Aromatic |
C4A | C8A | doub | 1.40Å | 1.33Å | Aromatic |
C6 | C7 | doub | 1.34Å | 1.34Å | Aromatic |
C6 | C9 | sing | 1.51Å | 1.49Å | |
C7 | O8 | sing | 1.35Å | 1.24Å | Aromatic |
C7 | H7 | sing | 1.08Å | 1.10Å | |
O8 | C8A | sing | 1.34Å | 1.23Å | Aromatic |
C9 | N10 | sing | 1.47Å | 1.48Å | |
C9 | H91 | sing | 1.09Å | 1.11Å | |
C9 | H92 | sing | 1.09Å | 1.11Å | |
N10 | C10 | sing | 1.47Å | 1.48Å | |
N10 | C14 | sing | 1.39Å | 1.34Å | |
C10 | H101 | sing | 1.09Å | 1.11Å | |
C10 | H102 | sing | 1.09Å | 1.11Å | |
C10 | H103 | sing | 1.09Å | 1.12Å | |
C11 | C12 | doub | 1.40Å | 1.36Å | Aromatic |
C11 | C16 | sing | 1.40Å | 1.35Å | Aromatic |
C11 | C | sing | 1.47Å | 1.34Å | |
C12 | C13 | sing | 1.37Å | 1.34Å | Aromatic |
C12 | H12 | sing | 1.08Å | 1.10Å | |
C13 | C14 | doub | 1.39Å | 1.34Å | Aromatic |
C13 | H13 | sing | 1.08Å | 1.10Å | |
C14 | C15 | sing | 1.39Å | 1.35Å | Aromatic |
C15 | C16 | doub | 1.38Å | 1.34Å | Aromatic |
C15 | H15 | sing | 1.08Å | 1.10Å | |
C16 | H16 | sing | 1.08Å | 1.10Å | |
C | O | doub | 1.22Å | 1.22Å | |
C | N | sing | 1.35Å | 1.36Å | |
N | CA | sing | 1.46Å | 1.50Å | |
N | HN | sing | 0.97Å | 1.02Å | |
CA | CB | sing | 1.53Å | 1.54Å | |
CA | CT | sing | 1.51Å | 1.50Å | |
CA | HA | sing | 1.09Å | 1.11Å | |
CB | CG | sing | 1.53Å | 1.53Å | |
CB | HB1 | sing | 1.09Å | 1.11Å | |
CB | HB2 | sing | 1.09Å | 1.12Å | |
CG | CD | sing | 1.51Å | 1.51Å | |
CG | HG1 | sing | 1.09Å | 1.12Å | |
CG | HG2 | sing | 1.09Å | 1.11Å | |
CD | OE1 | doub | 1.21Å | 1.22Å | |
CD | OE2 | sing | 1.34Å | 1.22Å | |
OE2 | HOE2 | sing | 0.97Å | 0.95Å | |
CT | O1 | doub | 1.21Å | 1.23Å | |
CT | O2 | sing | 1.34Å | 1.23Å | |
O2 | HO2 | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C2 | N1 | C8A | 112.5° | 120.7° |
N1 | C2 | NA2 | 115.4° | 118.8° |
N1 | C2 | N3 | 124.0° | 122.5° |
N1 | C8A | C4A | 122.9° | 118.5° |
N1 | C8A | O8 | 124.0° | 134.3° |
NA2 | C2 | N3 | 120.6° | 118.7° |
C2 | NA2 | HN21 | 115.4° | 120.0° |
C2 | NA2 | HN22 | 110.1° | 120.0° |
C2 | N3 | C4 | 123.7° | 120.9° |
HN21 | NA2 | HN22 | 110.0° | 120.0° |
N3 | C4 | N4 | 121.2° | 120.8° |
N3 | C4 | C4A | 115.8° | 118.4° |
N4 | C4 | C4A | 123.0° | 120.8° |
C4 | N4 | HN41 | 121.2° | 120.0° |
C4 | N4 | HN42 | 108.0° | 120.0° |
C4 | C4A | C6 | 136.0° | 135.4° |
C4 | C4A | C8A | 121.2° | 119.0° |
HN41 | N4 | HN42 | 108.1° | 120.0° |
C6 | C4A | C8A | 102.8° | 105.6° |
C4A | C6 | C7 | 101.1° | 106.1° |
C4A | C6 | C9 | 125.4° | 126.9° |
C4A | C8A | O8 | 113.1° | 107.2° |
C7 | C6 | C9 | 133.4° | 127.0° |
C6 | C7 | O8 | 113.6° | 110.0° |
C6 | C7 | H7 | 126.6° | 125.0° |
C6 | C9 | N10 | 122.3° | 109.4° |
C6 | C9 | H91 | 107.6° | 109.4° |
C6 | C9 | H92 | 107.6° | 109.5° |
O8 | C7 | H7 | 119.8° | 125.0° |
C7 | O8 | C8A | 109.3° | 111.0° |
N10 | C9 | H91 | 107.7° | 109.4° |
N10 | C9 | H92 | 107.7° | 109.5° |
C9 | N10 | C10 | 114.0° | 119.9° |
C9 | N10 | C14 | 117.9° | 120.0° |
H91 | C9 | H92 | 102.2° | 109.5° |
C10 | N10 | C14 | 120.7° | 120.0° |
N10 | C10 | H101 | 114.0° | 109.5° |
N10 | C10 | H102 | 110.5° | 109.5° |
N10 | C10 | H103 | 110.5° | 109.5° |
N10 | C14 | C13 | 124.7° | 120.0° |
N10 | C14 | C15 | 119.1° | 119.9° |
H101 | C10 | H102 | 110.6° | 109.5° |
H101 | C10 | H103 | 110.6° | 109.5° |
H102 | C10 | H103 | 99.7° | 109.5° |
C12 | C11 | C16 | 117.1° | 119.8° |
C12 | C11 | C | 119.8° | 120.1° |
C11 | C12 | C13 | 121.2° | 120.0° |
C11 | C12 | H12 | 120.1° | 120.0° |
C16 | C11 | C | 123.0° | 120.0° |
C11 | C16 | C15 | 120.5° | 120.0° |
C11 | C16 | H16 | 119.9° | 120.1° |
C11 | C | O | 124.3° | 119.9° |
C11 | C | N | 120.8° | 120.1° |
C13 | C12 | H12 | 118.7° | 120.0° |
C12 | C13 | C14 | 122.2° | 120.1° |
C12 | C13 | H13 | 118.7° | 120.0° |
C14 | C13 | H13 | 119.1° | 119.9° |
C13 | C14 | C15 | 116.2° | 120.1° |
C14 | C15 | C16 | 122.8° | 120.0° |
C14 | C15 | H15 | 118.7° | 120.0° |
C16 | C15 | H15 | 118.5° | 120.0° |
C15 | C16 | H16 | 119.5° | 120.0° |
O | C | N | 114.9° | 120.0° |
C | N | CA | 107.3° | 120.0° |
C | N | HN | 122.5° | 119.9° |
CA | N | HN | 130.2° | 120.0° |
N | CA | CB | 108.0° | 109.5° |
N | CA | CT | 108.2° | 109.5° |
N | CA | HA | 114.6° | 109.5° |
CB | CA | CT | 117.5° | 109.5° |
CB | CA | HA | 104.6° | 109.5° |
CA | CB | CG | 117.8° | 109.5° |
CA | CB | HB1 | 109.2° | 109.5° |
CA | CB | HB2 | 109.2° | 109.5° |
CT | CA | HA | 104.3° | 109.5° |
CA | CT | O1 | 122.6° | 120.0° |
CA | CT | O2 | 121.2° | 120.0° |
CG | CB | HB1 | 109.2° | 109.4° |
CG | CB | HB2 | 109.2° | 109.4° |
CB | CG | CD | 112.6° | 109.5° |
CB | CG | HG1 | 111.1° | 109.5° |
CB | CG | HG2 | 111.1° | 109.5° |
HB1 | CB | HB2 | 101.0° | 109.5° |
CD | CG | HG1 | 111.0° | 109.5° |
CD | CG | HG2 | 111.0° | 109.4° |
CG | CD | OE1 | 119.9° | 120.0° |
CG | CD | OE2 | 118.6° | 120.0° |
HG1 | CG | HG2 | 99.3° | 109.4° |
OE1 | CD | OE2 | 121.5° | 120.0° |
CD | OE2 | HOE2 | 118.7° | 120.0° |
O1 | CT | O2 | 116.1° | 120.0° |
CT | O2 | HO2 | 121.2° | 120.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
N1 | C2 | NA2 | N3 | 179.1° | 180.0° |
N1 | C2 | NA2 | HN21 | 180.0° | 180.0° |
N1 | C2 | NA2 | HN22 | 54.7° | 0.1° |
N1 | C2 | N3 | C4 | 1.3° | 0.0° |
C2 | N1 | C8A | C4A | 0.5° | 0.2° |
C2 | N1 | C8A | O8 | 179.3° | 180.0° |
C8A | N1 | C2 | NA2 | 178.2° | 180.0° |
C8A | N1 | C2 | N3 | 0.9° | 0.0° |
N1 | C8A | C4A | C4 | 0.5° | 0.6° |
N1 | C8A | C4A | C6 | 178.9° | 179.8° |
N1 | C8A | C4A | O8 | 179.0° | 179.8° |
N1 | C8A | O8 | C7 | 179.8° | 180.0° |
C2 | NA2 | HN21 | HN22 | 125.4° | 179.9° |
NA2 | C2 | N3 | C4 | 177.7° | 180.0° |
N3 | C2 | NA2 | HN21 | 0.9° | 0.0° |
N3 | C2 | NA2 | HN22 | 124.4° | 179.9° |
C2 | N3 | C4 | N4 | 179.8° | 179.9° |
C2 | N3 | C4 | C4A | 1.2° | 0.4° |
N3 | C4 | N4 | C4A | 178.9° | 179.7° |
N3 | C4 | N4 | HN41 | 180.0° | 0.0° |
N3 | C4 | N4 | HN42 | 54.7° | 180.0° |
N3 | C4 | C4A | C6 | 178.3° | 179.6° |
N3 | C4 | C4A | C8A | 0.7° | 0.6° |
C4 | N4 | HN41 | HN42 | 125.3° | 179.9° |
N4 | C4 | C4A | C6 | 0.7° | 0.8° |
N4 | C4 | C4A | C8A | 179.7° | 179.7° |
C4A | C4 | N4 | HN41 | 1.0° | 179.7° |
C4A | C4 | N4 | HN42 | 126.4° | 0.3° |
C4 | C4A | C6 | C8A | 179.2° | 179.0° |
C4 | C4A | C6 | C7 | 180.0° | 179.4° |
C4 | C4A | C6 | C9 | 0.5° | 0.8° |
C4 | C4A | C8A | O8 | 179.4° | 179.6° |
C4A | C6 | C7 | C9 | 179.4° | 179.8° |
C4A | C6 | C7 | O8 | 1.4° | 0.3° |
C4A | C6 | C7 | H7 | 178.6° | 179.8° |
C6 | C4A | C8A | O8 | 0.1° | 0.4° |
C4A | C6 | C9 | N10 | 164.2° | 179.7° |
C4A | C6 | C9 | H91 | 38.9° | 59.8° |
C4A | C6 | C9 | H92 | 70.6° | 60.3° |
C8A | C4A | C6 | C7 | 0.9° | 0.4° |
C8A | C4A | C6 | C9 | 179.7° | 179.8° |
C4A | C8A | O8 | C7 | 0.8° | 0.2° |
C6 | C7 | O8 | H7 | 180.0° | 179.9° |
C6 | C7 | O8 | C8A | 1.5° | 0.0° |
C7 | C6 | C9 | N10 | 16.6° | 0.1° |
C7 | C6 | C9 | H91 | 141.9° | 119.9° |
C7 | C6 | C9 | H92 | 108.7° | 120.0° |
C9 | C6 | C7 | O8 | 179.2° | 179.9° |
C9 | C6 | C7 | H7 | 0.8° | 0.0° |
C6 | C9 | N10 | H91 | 125.2° | 119.9° |
C6 | C9 | N10 | H92 | 125.2° | 120.0° |
C6 | C9 | H91 | H92 | 113.1° | 120.1° |
C6 | C9 | N10 | C10 | 98.2° | 90.0° |
C6 | C9 | N10 | C14 | 52.0° | 90.0° |
H7 | C7 | O8 | C8A | 178.5° | 180.0° |
N10 | C9 | H91 | H92 | 113.3° | 120.0° |
C9 | N10 | C10 | C14 | 149.4° | 180.0° |
C9 | N10 | C10 | H101 | 180.0° | 0.0° |
C9 | N10 | C10 | H102 | 54.7° | 120.0° |
C9 | N10 | C10 | H103 | 54.7° | 120.0° |
C9 | N10 | C14 | C13 | 30.2° | 180.0° |
C9 | N10 | C14 | C15 | 147.5° | 0.3° |
H91 | C9 | N10 | C10 | 136.5° | 150.1° |
H91 | C9 | N10 | C14 | 73.2° | 29.9° |
H92 | C9 | N10 | C10 | 27.0° | 30.0° |
H92 | C9 | N10 | C14 | 177.3° | 150.0° |
N10 | C10 | H101 | H102 | 125.3° | 120.0° |
N10 | C10 | H101 | H103 | 125.2° | 120.0° |
N10 | C10 | H102 | H103 | 116.3° | 120.0° |
C10 | N10 | C14 | C13 | 178.5° | 0.0° |
C10 | N10 | C14 | C15 | 0.7° | 179.7° |
C14 | N10 | C10 | H101 | 30.6° | 180.0° |
C14 | N10 | C10 | H102 | 155.9° | 60.0° |
C14 | N10 | C10 | H103 | 94.7° | 60.0° |
N10 | C14 | C13 | C12 | 177.2° | 180.0° |
N10 | C14 | C13 | C15 | 177.8° | 179.7° |
N10 | C14 | C13 | H13 | 2.8° | 0.0° |
N10 | C14 | C15 | C16 | 178.2° | 179.7° |
N10 | C14 | C15 | H15 | 1.7° | 0.3° |
H101 | C10 | H102 | H103 | 116.4° | 120.0° |
C12 | C11 | C16 | C | 177.9° | 180.0° |
C11 | C12 | C13 | H12 | 179.9° | 179.9° |
C11 | C12 | C13 | C14 | 1.9° | 0.0° |
C11 | C12 | C13 | H13 | 178.1° | 180.0° |
C12 | C11 | C16 | C15 | 1.2° | 0.3° |
C12 | C11 | C16 | H16 | 178.7° | 179.9° |
C12 | C11 | C | O | 162.3° | 0.0° |
C12 | C11 | C | N | 17.7° | 180.0° |
C16 | C11 | C12 | C13 | 2.1° | 0.1° |
C16 | C11 | C12 | H12 | 177.8° | 180.0° |
C11 | C16 | C15 | C14 | 0.1° | 0.6° |
C11 | C16 | C15 | H16 | 179.9° | 179.7° |
C11 | C16 | C15 | H15 | 180.0° | 180.0° |
C16 | C11 | C | O | 19.8° | 180.0° |
C16 | C11 | C | N | 160.2° | 0.1° |
C | C11 | C12 | C13 | 179.9° | 179.9° |
C | C11 | C12 | H12 | 0.2° | 0.0° |
C | C11 | C16 | C15 | 179.2° | 179.7° |
C | C11 | C16 | H16 | 0.8° | 0.1° |
C11 | C | O | N | 180.0° | 179.9° |
C11 | C | N | CA | 159.9° | 179.9° |
C11 | C | N | HN | 20.1° | 0.0° |
C12 | C13 | C14 | H13 | 180.0° | 179.9° |
C12 | C13 | C14 | C15 | 0.6° | 0.3° |
H12 | C12 | C13 | C14 | 178.0° | 180.0° |
H12 | C12 | C13 | H13 | 1.9° | 0.1° |
C13 | C14 | C15 | C16 | 0.3° | 0.6° |
C13 | C14 | C15 | H15 | 179.7° | 180.0° |
H13 | C13 | C14 | C15 | 179.4° | 179.8° |
C14 | C15 | C16 | H15 | 179.9° | 179.4° |
C14 | C15 | C16 | H16 | 179.9° | 179.7° |
H15 | C15 | C16 | H16 | 0.0° | 0.3° |
O | C | N | CA | 20.1° | 0.0° |
O | C | N | HN | 159.8° | 180.0° |
C | N | CA | HN | 180.0° | 180.0° |
C | N | CA | CB | 75.9° | 150.0° |
C | N | CA | CT | 155.9° | 90.0° |
C | N | CA | HA | 40.1° | 30.0° |
N | CA | CB | CT | 122.6° | 120.0° |
N | CA | CB | HA | 122.4° | 120.0° |
N | CA | CT | HA | 122.4° | 120.0° |
N | CA | CB | CG | 113.6° | 60.0° |
N | CA | CB | HB1 | 121.2° | 60.0° |
N | CA | CB | HB2 | 11.6° | 180.0° |
N | CA | CT | O1 | 10.4° | 150.0° |
N | CA | CT | O2 | 165.7° | 30.0° |
HN | N | CA | CB | 104.0° | 30.0° |
HN | N | CA | CT | 24.1° | 90.0° |
HN | N | CA | HA | 139.9° | 150.0° |
CB | CA | CT | HA | 115.2° | 120.0° |
CA | CB | CG | HB1 | 125.3° | 120.0° |
CA | CB | CG | HB2 | 125.2° | 120.0° |
CA | CB | HB1 | HB2 | 115.0° | 120.0° |
CA | CB | CG | CD | 134.7° | 180.0° |
CA | CB | CG | HG1 | 9.5° | 60.0° |
CA | CB | CG | HG2 | 100.0° | 60.0° |
CB | CA | CT | O1 | 112.1° | 90.0° |
CB | CA | CT | O2 | 71.8° | 90.0° |
CT | CA | CB | CG | 9.0° | 180.0° |
CT | CA | CB | HB1 | 116.2° | 60.0° |
CT | CA | CB | HB2 | 134.2° | 60.1° |
CA | CT | O1 | O2 | 176.3° | 180.0° |
CA | CT | O2 | HO2 | 180.0° | 180.0° |
HA | CA | CB | CG | 124.0° | 60.0° |
HA | CA | CB | HB1 | 1.2° | 180.0° |
HA | CA | CB | HB2 | 110.7° | 60.0° |
HA | CA | CT | O1 | 132.8° | 30.0° |
HA | CA | CT | O2 | 43.4° | 150.0° |
CG | CB | HB1 | HB2 | 114.9° | 119.9° |
CB | CG | CD | HG1 | 125.3° | 120.0° |
CB | CG | CD | HG2 | 125.3° | 120.0° |
CB | CG | HG1 | HG2 | 117.0° | 120.0° |
CB | CG | CD | OE1 | 16.5° | 0.0° |
CB | CG | CD | OE2 | 162.4° | 180.0° |
HB1 | CB | CG | CD | 100.0° | 60.0° |
HB1 | CB | CG | HG1 | 134.8° | 180.0° |
HB1 | CB | CG | HG2 | 25.3° | 60.0° |
HB2 | CB | CG | CD | 9.5° | 60.0° |
HB2 | CB | CG | HG1 | 115.7° | 60.0° |
HB2 | CB | CG | HG2 | 134.8° | 180.0° |
CD | CG | HG1 | HG2 | 116.9° | 120.0° |
CG | CD | OE1 | OE2 | 178.9° | 180.0° |
CG | CD | OE2 | HOE2 | 180.0° | 180.0° |
HG1 | CG | CD | OE1 | 141.8° | 120.0° |
HG1 | CG | CD | OE2 | 37.1° | 60.0° |
HG2 | CG | CD | OE1 | 108.7° | 120.0° |
HG2 | CG | CD | OE2 | 72.3° | 60.0° |
OE1 | CD | OE2 | HOE2 | 1.1° | 0.0° |
O1 | CT | O2 | HO2 | 3.7° | 0.0° |