CM6
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
O1 | C1 | doub | 1.21Å | 1.23Å | |
C1 | N1 | sing | 1.35Å | 1.33Å | |
C1 | C7 | sing | 1.51Å | 1.47Å | |
N1 | C2 | sing | 1.40Å | 1.36Å | |
N1 | H1 | sing | 0.97Å | 1.00Å | |
C2 | C3 | doub | 1.39Å | 1.40Å | Aromatic |
C2 | C6 | sing | 1.39Å | 1.42Å | Aromatic |
C3 | C4 | sing | 1.38Å | 1.35Å | Aromatic |
C3 | H3 | sing | 1.08Å | 1.08Å | |
C4 | N2 | doub | 1.32Å | 1.34Å | Aromatic |
C4 | H4 | sing | 1.08Å | 1.08Å | |
N2 | C5 | sing | 1.32Å | 1.34Å | Aromatic |
C5 | C6 | doub | 1.38Å | 1.34Å | Aromatic |
C5 | H5 | sing | 1.08Å | 1.08Å | |
C6 | H6 | sing | 1.08Å | 1.08Å | |
C7 | N3 | sing | 1.47Å | 1.47Å | |
C7 | C14 | sing | 1.51Å | 1.51Å | |
C7 | H7 | sing | 1.09Å | 1.10Å | |
N3 | S1 | sing | 1.66Å | 1.69Å | |
N3 | HA | sing | 0.97Å | 1.00Å | |
S1 | O2 | doub | 1.42Å | 1.42Å | |
S1 | O3 | doub | 1.42Å | 1.43Å | |
S1 | C8 | sing | 1.76Å | 1.78Å | |
C8 | C9 | doub | 1.35Å | 1.39Å | Aromatic |
C8 | C13 | sing | 1.42Å | 1.45Å | Aromatic |
C9 | C10 | sing | 1.40Å | 1.43Å | Aromatic |
C9 | H9 | sing | 1.08Å | 1.08Å | |
C10 | C11 | doub | 1.35Å | 1.38Å | Aromatic |
C10 | H10 | sing | 1.08Å | 1.08Å | |
C11 | C12 | sing | 1.42Å | 1.45Å | Aromatic |
C11 | H11 | sing | 1.08Å | 1.08Å | |
C12 | N4 | doub | 1.33Å | 1.33Å | Aromatic |
C12 | C13 | sing | 1.46Å | 1.48Å | Aromatic |
N4 | S2 | sing | 1.57Å | 1.57Å | Aromatic |
S2 | N5 | sing | 1.57Å | 1.57Å | Aromatic |
N5 | C13 | doub | 1.33Å | 1.33Å | Aromatic |
C14 | C15 | doub | 1.38Å | 1.41Å | Aromatic |
C14 | C19 | sing | 1.38Å | 1.41Å | Aromatic |
C15 | C16 | sing | 1.38Å | 1.41Å | Aromatic |
C15 | H15 | sing | 1.08Å | 1.08Å | |
C16 | C17 | doub | 1.38Å | 1.41Å | Aromatic |
C16 | H16 | sing | 1.08Å | 1.08Å | |
C17 | C18 | sing | 1.38Å | 1.41Å | Aromatic |
C17 | H17 | sing | 1.08Å | 1.08Å | |
C18 | C19 | doub | 1.38Å | 1.40Å | Aromatic |
C18 | H18 | sing | 1.08Å | 1.08Å | |
C19 | H19 | sing | 1.08Å | 1.08Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O1 | C1 | N1 | 123.4° | 120.0° |
O1 | C1 | C7 | 119.9° | 120.0° |
N1 | C1 | C7 | 116.7° | 120.0° |
C1 | N1 | C2 | 125.6° | 120.0° |
C1 | N1 | H1 | 117.2° | 120.0° |
C1 | C7 | N3 | 108.4° | 109.5° |
C1 | C7 | C14 | 108.1° | 109.5° |
C1 | C7 | H7 | 113.0° | 109.5° |
C2 | N1 | H1 | 117.2° | 120.0° |
N1 | C2 | C3 | 117.1° | 120.8° |
N1 | C2 | C6 | 122.3° | 120.9° |
C3 | C2 | C6 | 120.5° | 118.3° |
C2 | C3 | C4 | 118.1° | 119.1° |
C2 | C3 | H3 | 120.9° | 120.5° |
C2 | C6 | C5 | 118.3° | 119.1° |
C2 | C6 | H6 | 120.9° | 120.4° |
C4 | C3 | H3 | 120.9° | 120.5° |
C3 | C4 | N2 | 119.0° | 120.8° |
C3 | C4 | H4 | 120.5° | 119.6° |
N2 | C4 | H4 | 120.5° | 119.6° |
C4 | N2 | C5 | 125.0° | 121.9° |
N2 | C5 | C6 | 119.0° | 120.8° |
N2 | C5 | H5 | 120.5° | 119.6° |
C6 | C5 | H5 | 120.5° | 119.6° |
C5 | C6 | H6 | 120.8° | 120.5° |
N3 | C7 | C14 | 114.5° | 109.4° |
N3 | C7 | H7 | 106.4° | 109.5° |
C7 | N3 | S1 | 119.6° | 120.0° |
C7 | N3 | HA | 106.2° | 120.0° |
C14 | C7 | H7 | 106.7° | 109.5° |
C7 | C14 | C15 | 118.3° | 120.0° |
C7 | C14 | C19 | 121.6° | 120.0° |
S1 | N3 | HA | 106.2° | 120.1° |
N3 | S1 | O2 | 105.1° | 105.8° |
N3 | S1 | O3 | 103.7° | 105.8° |
N3 | S1 | C8 | 111.1° | 107.4° |
O2 | S1 | O3 | 122.0° | 125.3° |
O2 | S1 | C8 | 106.9° | 105.8° |
O3 | S1 | C8 | 107.8° | 105.8° |
S1 | C8 | C9 | 120.5° | 120.0° |
S1 | C8 | C13 | 119.8° | 120.0° |
C9 | C8 | C13 | 119.8° | 120.0° |
C8 | C9 | C10 | 121.4° | 121.6° |
C8 | C9 | H9 | 119.3° | 119.2° |
C8 | C13 | C12 | 118.6° | 118.4° |
C8 | C13 | N5 | 129.5° | 129.5° |
C10 | C9 | H9 | 119.3° | 119.2° |
C9 | C10 | C11 | 121.4° | 121.5° |
C9 | C10 | H10 | 119.3° | 119.3° |
C11 | C10 | H10 | 119.3° | 119.2° |
C10 | C11 | C12 | 120.1° | 120.0° |
C10 | C11 | H11 | 119.9° | 120.0° |
C12 | C11 | H11 | 119.9° | 120.0° |
C11 | C12 | N4 | 129.7° | 129.5° |
C11 | C12 | C13 | 118.6° | 118.5° |
N4 | C12 | C13 | 111.7° | 112.0° |
C12 | N4 | S2 | 106.4° | 106.2° |
C12 | C13 | N5 | 111.9° | 112.1° |
N4 | S2 | N5 | 103.7° | 103.4° |
S2 | N5 | C13 | 106.3° | 106.3° |
C15 | C14 | C19 | 120.1° | 120.0° |
C14 | C15 | C16 | 119.8° | 120.0° |
C14 | C15 | H15 | 120.1° | 120.0° |
C14 | C19 | C18 | 120.0° | 120.0° |
C14 | C19 | H19 | 120.0° | 120.0° |
C16 | C15 | H15 | 120.1° | 120.0° |
C15 | C16 | C17 | 120.1° | 120.0° |
C15 | C16 | H16 | 119.9° | 119.9° |
C17 | C16 | H16 | 120.0° | 120.1° |
C16 | C17 | C18 | 120.2° | 120.0° |
C16 | C17 | H17 | 119.9° | 120.0° |
C18 | C17 | H17 | 119.9° | 120.0° |
C17 | C18 | C19 | 119.8° | 120.0° |
C17 | C18 | H18 | 120.1° | 120.0° |
C19 | C18 | H18 | 120.1° | 120.0° |
C18 | C19 | H19 | 120.0° | 120.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O1 | C1 | N1 | C7 | 179.0° | 179.7° |
O1 | C1 | N1 | C2 | 2.2° | 5.4° |
O1 | C1 | N1 | H1 | 177.8° | 174.7° |
O1 | C1 | C7 | N3 | 37.3° | 0.0° |
O1 | C1 | C7 | C14 | 87.3° | 120.0° |
O1 | C1 | C7 | H7 | 154.9° | 120.0° |
C1 | N1 | C2 | H1 | 180.0° | 179.9° |
C1 | N1 | C2 | C3 | 178.4° | 148.1° |
C1 | N1 | C2 | C6 | 2.3° | 32.3° |
N1 | C1 | C7 | N3 | 141.7° | 179.7° |
N1 | C1 | C7 | C14 | 93.7° | 60.3° |
N1 | C1 | C7 | H7 | 24.1° | 59.7° |
C7 | C1 | N1 | C2 | 176.8° | 174.9° |
C7 | C1 | N1 | H1 | 3.2° | 5.0° |
C1 | C7 | N3 | C14 | 120.7° | 120.0° |
C1 | C7 | N3 | H7 | 121.8° | 120.0° |
C1 | C7 | C14 | H7 | 121.8° | 120.0° |
C1 | C7 | N3 | S1 | 74.1° | 143.1° |
C1 | C7 | N3 | HA | 45.9° | 36.9° |
C1 | C7 | C14 | C15 | 113.1° | 100.0° |
C1 | C7 | C14 | C19 | 66.1° | 80.2° |
N1 | C2 | C3 | C6 | 179.3° | 179.7° |
N1 | C2 | C3 | C4 | 179.3° | 180.0° |
N1 | C2 | C3 | H3 | 0.7° | 0.1° |
N1 | C2 | C6 | C5 | 179.0° | 179.8° |
N1 | C2 | C6 | H6 | 0.9° | 0.2° |
H1 | N1 | C2 | C3 | 1.6° | 32.0° |
H1 | N1 | C2 | C6 | 177.7° | 147.7° |
C2 | C3 | C4 | H3 | 180.0° | 179.9° |
C2 | C3 | C4 | N2 | 0.2° | 0.0° |
C2 | C3 | C4 | H4 | 179.8° | 180.0° |
C3 | C2 | C6 | C5 | 0.2° | 0.5° |
C3 | C2 | C6 | H6 | 179.8° | 179.9° |
C6 | C2 | C3 | C4 | 0.0° | 0.3° |
C6 | C2 | C3 | H3 | 180.0° | 179.8° |
C2 | C6 | C5 | N2 | 0.2° | 0.5° |
C2 | C6 | C5 | H6 | 180.0° | 179.6° |
C2 | C6 | C5 | H5 | 179.8° | 179.7° |
C3 | C4 | N2 | H4 | 180.0° | 180.0° |
C3 | C4 | N2 | C5 | 0.3° | 0.0° |
H3 | C3 | C4 | N2 | 179.7° | 179.9° |
H3 | C3 | C4 | H4 | 0.3° | 0.1° |
C4 | N2 | C5 | C6 | 0.0° | 0.2° |
C4 | N2 | C5 | H5 | 179.9° | 180.0° |
H4 | C4 | N2 | C5 | 179.7° | 180.0° |
N2 | C5 | C6 | H5 | 180.0° | 179.8° |
N2 | C5 | C6 | H6 | 179.8° | 180.0° |
H5 | C5 | C6 | H6 | 0.2° | 0.1° |
N3 | C7 | C14 | H7 | 117.4° | 120.0° |
C7 | N3 | S1 | HA | 120.0° | 180.0° |
C7 | N3 | S1 | O2 | 176.3° | 178.2° |
C7 | N3 | S1 | O3 | 47.2° | 47.1° |
C7 | N3 | S1 | C8 | 68.4° | 65.6° |
N3 | C7 | C14 | C15 | 126.1° | 140.0° |
N3 | C7 | C14 | C19 | 54.8° | 39.8° |
C14 | C7 | N3 | S1 | 165.2° | 96.9° |
C14 | C7 | N3 | HA | 74.8° | 83.1° |
C7 | C14 | C15 | C19 | 179.2° | 179.8° |
C7 | C14 | C15 | C16 | 179.4° | 179.9° |
C7 | C14 | C15 | H15 | 0.6° | 0.0° |
C7 | C14 | C19 | C18 | 179.3° | 179.7° |
C7 | C14 | C19 | H19 | 0.7° | 0.2° |
H7 | C7 | N3 | S1 | 47.6° | 23.1° |
H7 | C7 | N3 | HA | 167.6° | 156.9° |
H7 | C7 | C14 | C15 | 8.7° | 20.0° |
H7 | C7 | C14 | C19 | 172.1° | 159.7° |
N3 | S1 | O2 | O3 | 117.4° | 123.1° |
N3 | S1 | O2 | C8 | 118.1° | 113.7° |
N3 | S1 | O3 | C8 | 117.9° | 113.8° |
N3 | S1 | C8 | C9 | 115.1° | 114.9° |
N3 | S1 | C8 | C13 | 64.1° | 65.4° |
HA | N3 | S1 | O2 | 63.7° | 1.8° |
HA | N3 | S1 | O3 | 167.1° | 132.9° |
HA | N3 | S1 | C8 | 51.6° | 114.4° |
O2 | S1 | O3 | C8 | 124.1° | 123.1° |
O2 | S1 | C8 | C9 | 130.7° | 132.5° |
O2 | S1 | C8 | C13 | 50.1° | 47.2° |
O3 | S1 | C8 | C9 | 2.1° | 2.3° |
O3 | S1 | C8 | C13 | 177.1° | 178.0° |
S1 | C8 | C9 | C13 | 179.2° | 179.7° |
S1 | C8 | C9 | C10 | 179.3° | 180.0° |
S1 | C8 | C9 | H9 | 0.7° | 0.1° |
S1 | C8 | C13 | C12 | 179.2° | 179.8° |
S1 | C8 | C13 | N5 | 0.6° | 0.6° |
C8 | C9 | C10 | H9 | 180.0° | 179.9° |
C8 | C9 | C10 | C11 | 0.2° | 0.0° |
C8 | C9 | C10 | H10 | 179.8° | 179.9° |
C9 | C8 | C13 | C12 | 0.0° | 0.5° |
C9 | C8 | C13 | N5 | 179.8° | 179.7° |
C13 | C8 | C9 | C10 | 0.1° | 0.3° |
C13 | C8 | C9 | H9 | 179.8° | 179.8° |
C8 | C13 | C12 | C11 | 0.1° | 0.5° |
C8 | C13 | C12 | N4 | 179.8° | 179.7° |
C8 | C13 | C12 | N5 | 179.8° | 179.3° |
C8 | C13 | N5 | S2 | 179.8° | 179.6° |
C9 | C10 | C11 | H10 | 180.0° | 180.0° |
C9 | C10 | C11 | C12 | 0.2° | 0.0° |
C9 | C10 | C11 | H11 | 179.9° | 180.0° |
H9 | C9 | C10 | C11 | 179.8° | 180.0° |
H9 | C9 | C10 | H10 | 0.2° | 0.0° |
C10 | C11 | C12 | H11 | 180.0° | 179.9° |
C10 | C11 | C12 | N4 | 179.9° | 180.0° |
C10 | C11 | C12 | C13 | 0.0° | 0.3° |
H10 | C10 | C11 | C12 | 179.8° | 180.0° |
H10 | C10 | C11 | H11 | 0.1° | 0.0° |
C11 | C12 | N4 | C13 | 179.8° | 179.8° |
C11 | C12 | N4 | S2 | 179.8° | 180.0° |
C11 | C12 | C13 | N5 | 179.9° | 179.8° |
H11 | C11 | C12 | N4 | 0.2° | 0.0° |
H11 | C11 | C12 | C13 | 180.0° | 179.8° |
C12 | N4 | S2 | N5 | 0.0° | 0.0° |
N4 | C12 | C13 | N5 | 0.0° | 0.4° |
C13 | C12 | N4 | S2 | 0.0° | 0.2° |
C12 | C13 | N5 | S2 | 0.0° | 0.4° |
N4 | S2 | N5 | C13 | 0.0° | 0.3° |
C14 | C15 | C16 | H15 | 180.0° | 179.9° |
C14 | C15 | C16 | C17 | 0.1° | 0.1° |
C14 | C15 | C16 | H16 | 179.9° | 180.0° |
C15 | C14 | C19 | C18 | 0.2° | 0.5° |
C15 | C14 | C19 | H19 | 179.8° | 180.0° |
C19 | C14 | C15 | C16 | 0.2° | 0.3° |
C19 | C14 | C15 | H15 | 179.8° | 179.8° |
C14 | C19 | C18 | C17 | 0.0° | 0.5° |
C14 | C19 | C18 | H19 | 180.0° | 179.5° |
C14 | C19 | C18 | H18 | 180.0° | 179.7° |
C15 | C16 | C17 | H16 | 180.0° | 180.0° |
C15 | C16 | C17 | C18 | 0.1° | 0.0° |
C15 | C16 | C17 | H17 | 179.9° | 180.0° |
H15 | C15 | C16 | C17 | 179.9° | 180.0° |
H15 | C15 | C16 | H16 | 0.1° | 0.1° |
C16 | C17 | C18 | H17 | 180.0° | 180.0° |
C16 | C17 | C18 | C19 | 0.1° | 0.2° |
C16 | C17 | C18 | H18 | 179.9° | 180.0° |
H16 | C16 | C17 | C18 | 179.9° | 180.0° |
H16 | C16 | C17 | H17 | 0.1° | 0.0° |
C17 | C18 | C19 | H18 | 180.0° | 179.8° |
C17 | C18 | C19 | H19 | 180.0° | 180.0° |
H17 | C17 | C18 | C19 | 179.9° | 179.8° |
H17 | C17 | C18 | H18 | 0.1° | 0.0° |
H18 | C18 | C19 | H19 | 0.0° | 0.2° |