Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

CLD

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
NCAsing1.47Å1.46Å
NHsing1.01Å1.02Å
NH2sing1.01Å1.02Å
CACBsing1.53Å1.53Å
CACsing1.51Å1.53Å
CAHAsing1.09Å1.12Å
CBOB3sing1.43Å1.41Å
CBHB2sing1.09Å1.12Å
CBHB3sing1.09Å1.12Å
OB3Bsing1.37Å1.43Å
COdoub1.21Å1.23Å
COXTsing1.34Å1.34Å
OXTHXTsing0.97Å0.95Å
N9C8sing1.46Å1.46Å
N9C10sing1.35Å1.33Å
N9HN9sing0.97Å1.02Å
C8C7sing1.53Å1.55Å
C8Bsing1.60Å1.64Å
C8H8sing1.09Å1.12Å
C7C1sing1.51Å1.52Å
C7H71sing1.09Å1.11Å
C7H72sing1.09Å1.11Å
C1C2doub1.38Å1.40ÅAromatic
C1C6sing1.38Å1.40ÅAromatic
C2C3sing1.38Å1.40ÅAromatic
C2HC2sing1.08Å1.10Å
C3C4doub1.38Å1.39ÅAromatic
C3H3sing1.08Å1.10Å
C6C5doub1.38Å1.40ÅAromatic
C6H6sing1.08Å1.10Å
C5C4sing1.38Å1.39ÅAromatic
C5H5sing1.08Å1.10Å
C4CL4sing1.74Å1.79Å
OB1Bsing1.37Å1.51Å
OB1HOB1sing0.97Å0.95Å
OB2Bsing1.37Å1.51Å
OB2HOB2sing0.97Å0.95Å
C10O10doub1.21Å1.23Å
C10C11sing1.51Å1.53Å
C11H111sing1.09Å1.12Å
C11H112sing1.09Å1.12Å
C11H113sing1.09Å1.11Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
CANH111.0°106.7°
CANH2111.6°106.8°
NCACB111.0°109.4°
NCAC109.2°109.5°
NCAHA108.2°109.5°
HNH2111.6°106.7°
CBCAC108.3°109.5°
CBCAHA109.1°109.5°
CACBOB3112.8°109.5°
CACBHB2111.0°109.5°
CACBHB3111.0°109.5°
CCAHA111.0°109.5°
CACO120.2°120.1°
CACOXT116.1°119.9°
OB3CBHB2111.0°109.5°
OB3CBHB3111.0°109.5°
CBOB3B109.2°106.8°
HB2CBHB399.4°109.4°
OB3BC897.6°109.4°
OB3BOB1120.2°109.5°
OB3BOB2120.2°109.4°
OCOXT123.5°120.0°
COXTHXT116.1°120.0°
C8N9C10122.8°120.0°
C8N9HN9123.6°120.0°
N9C8C7118.4°109.5°
N9C8B107.7°109.4°
N9C8H8104.1°109.5°
C10N9HN9113.6°120.0°
N9C10O10121.4°120.0°
N9C10C11118.6°120.0°
C7C8B108.4°109.4°
C7C8H8103.4°109.5°
C8C7C1114.6°109.4°
C8C7H71110.3°109.5°
C8C7H72110.4°109.5°
BC8H8115.0°109.5°
C8BOB199.8°109.5°
C8BOB297.7°109.5°
C1C7H71110.3°109.5°
C1C7H72110.3°109.5°
C7C1C2120.9°120.0°
C7C1C6121.2°120.0°
H71C7H72100.0°109.5°
C2C1C6117.9°120.0°
C1C2C3121.5°120.0°
C1C2HC2119.2°120.0°
C1C6C5121.2°120.0°
C1C6H6119.3°120.0°
C3C2HC2119.4°120.0°
C2C3C4119.5°120.0°
C2C3H3120.8°120.0°
C4C3H3119.7°120.0°
C3C4C5120.3°120.0°
C3C4CL4117.8°120.0°
C5C6H6119.4°120.0°
C6C5C4119.6°119.9°
C6C5H5120.5°120.0°
C4C5H5119.9°120.0°
C5C4CL4121.9°120.0°
BOB1HOB1120.1°106.8°
OB1BOB2113.4°109.5°
BOB2HOB2120.2°106.8°
O10C10C11118.4°120.0°
C10C11H111118.7°109.5°
C10C11H112108.9°109.4°
C10C11H113108.9°109.4°
H111C11H112108.9°109.5°
H111C11H113108.9°109.5°
H112C11H113101.2°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
CANHH2125.2°113.9°
NCACBC119.9°120.0°
NCACBHA119.2°120.0°
NCACHA119.2°120.0°
NCACBOB377.7°65.0°
NCACBHB247.6°175.0°
NCACBHB3157.1°55.0°
NCACO152.2°20.0°
NCACOXT31.1°160.0°
HNCACB180.0°173.8°
HNCAC60.7°53.8°
HNCAHA60.3°66.2°
H2NCACB54.8°60.0°
H2NCAC174.1°60.0°
H2NCAHA64.9°180.0°
CBCACHA119.7°120.0°
CACBOB3HB2125.3°120.0°
CACBOB3HB3125.2°120.0°
CACBHB2HB3116.9°120.0°
CACBOB3B111.2°180.0°
CBCACO86.7°100.0°
CBCACOXT89.9°80.0°
CCACBOB3162.4°175.1°
CCACBHB272.3°55.0°
CCACBHB337.2°64.9°
CACOOXT176.4°179.9°
CACOXTHXT180.0°180.0°
HACACBOB341.5°55.0°
HACACBHB2166.7°65.1°
HACACBHB383.7°175.0°
HACACO33.0°140.0°
HACACOXT150.3°40.0°
OB3CBHB2HB3116.9°120.0°
CBOB3BC8160.0°180.0°
CBOB3BOB154.0°60.0°
CBOB3BOB296.5°60.1°
HB2CBOB3B14.1°60.0°
HB3CBOB3B123.6°60.0°
OB3BC8N9141.0°48.7°
OB3BC8C789.8°168.6°
OB3BC8OB1122.5°120.0°
OB3BC8OB2122.0°119.9°
OB3BC8H825.4°71.3°
OB3BOB1OB2152.3°120.0°
OB3BOB1HOB1180.0°55.0°
OB3BOB2HOB2179.9°60.0°
OCOXTHXT3.4°0.1°
C8N9C10HN9180.0°179.9°
N9C8C7B123.0°120.0°
N9C8C7H8114.5°120.0°
N9C8BH8115.6°120.0°
N9C8C7C152.0°180.0°
N9C8C7H71177.2°60.0°
N9C8C7H7273.2°60.0°
N9C8BOB196.5°71.3°
N9C8BOB219.0°168.6°
C8N9C10O1080.3°5.2°
C8N9C10C11113.8°174.8°
C10N9C8C7128.1°136.0°
C10N9C8B108.6°104.0°
C10N9C8H814.0°16.0°
N9C10O10C11165.9°180.0°
N9C10C11H111180.0°180.0°
N9C10C11H11254.8°60.1°
N9C10C11H11354.7°60.0°
HN9N9C8C751.9°43.9°
HN9N9C8B71.4°76.0°
HN9N9C8H8166.0°164.0°
HN9N9C10O1099.7°174.9°
HN9N9C10C1166.1°5.1°
C7C8BH8115.2°120.0°
C8C7C1H71125.2°120.0°
C8C7C1H72125.2°120.0°
C8C7H71H72116.2°120.0°
C8C7C1C267.2°90.0°
C8C7C1C6112.2°90.3°
C7C8BOB132.7°48.6°
C7C8BOB2148.2°71.4°
BC8C7C1175.0°60.0°
BC8C7H7159.8°60.0°
BC8C7H7249.8°180.0°
C8BOB1OB2102.9°120.0°
C8BOB1HOB175.2°65.0°
C8BOB2HOB276.5°60.0°
H8C8C7C162.5°60.0°
H8C8C7H7162.7°NaN°
H8C8C7H72172.3°60.0°
H8C8BOB1147.9°168.7°
H8C8BOB296.6°48.6°
C1C7H71H72116.2°120.0°
C7C1C2C6179.4°179.7°
C7C1C2C3179.1°180.0°
C7C1C2HC20.9°0.0°
C7C1C6C5179.2°179.8°
C7C1C6H60.8°0.3°
H71C7C1C2167.6°30.0°
H71C7C1C613.1°149.7°
H72C7C1C258.1°150.0°
H72C7C1C6122.6°29.7°
C1C2C3HC2180.0°180.0°
C1C2C3C40.2°0.0°
C1C2C3H3179.8°179.9°
C2C1C6C50.1°0.5°
C2C1C6H6179.9°180.0°
C6C1C2C30.3°0.3°
C6C1C2HC2179.7°179.7°
C1C6C5H6180.0°179.5°
C1C6C5C40.1°0.5°
C1C6C5H5179.8°179.7°
C2C3C4H3180.0°179.9°
C2C3C4C50.1°0.0°
C2C3C4CL4179.7°180.0°
HC2C2C3C4179.8°180.0°
HC2C2C3H30.2°0.1°
C3C4C5C60.2°0.2°
C3C4C5CL4179.7°180.0°
C3C4C5H5179.7°180.0°
H3C3C4C5179.9°179.9°
H3C3C4CL40.3°0.1°
C6C5C4H5180.0°179.8°
C6C5C4CL4179.5°179.7°
H6C6C5C4179.9°180.0°
H6C6C5H50.2°0.2°
H5C5C4CL40.5°0.0°
OB1BOB2HOB227.8°180.0°
HOB1OB1BOB227.7°175.0°
O10C10C11H11113.8°0.0°
O10C10C11H112139.0°120.0°
O10C10C11H113111.5°120.0°
C10C11H111H112125.3°119.9°
C10C11H111H113125.3°120.0°
C10C11H112H113114.7°120.0°
H111C11H112H113114.6°120.1°

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon