CLB
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.47Å | 1.46Å | |
N | H | sing | 1.01Å | 1.02Å | |
N | H2 | sing | 1.01Å | 1.02Å | |
CA | CB | sing | 1.53Å | 1.54Å | |
CA | C | sing | 1.51Å | 1.52Å | |
CA | HA | sing | 1.09Å | 1.12Å | |
CB | OB3 | sing | 1.43Å | 1.42Å | |
CB | HB2 | sing | 1.09Å | 1.11Å | |
CB | HB3 | sing | 1.09Å | 1.11Å | |
OB3 | B | sing | 1.37Å | 1.43Å | |
C | O | doub | 1.21Å | 1.22Å | |
C | OXT | sing | 1.34Å | 1.32Å | |
OXT | HXT | sing | 0.97Å | 0.95Å | |
N9 | C8 | sing | 1.46Å | 1.45Å | |
N9 | C10 | sing | 1.35Å | 1.33Å | |
N9 | HN9 | sing | 0.97Å | 1.02Å | |
C8 | C7 | sing | 1.53Å | 1.55Å | |
C8 | B | sing | 1.60Å | 1.69Å | |
C8 | H8 | sing | 1.09Å | 1.12Å | |
C7 | C1 | sing | 1.51Å | 1.54Å | |
C7 | H71 | sing | 1.09Å | 1.11Å | |
C7 | H72 | sing | 1.09Å | 1.11Å | |
C1 | C2 | doub | 1.38Å | 1.40Å | Aromatic |
C1 | C6 | sing | 1.38Å | 1.40Å | Aromatic |
C2 | C3 | sing | 1.38Å | 1.40Å | Aromatic |
C2 | HC2 | sing | 1.08Å | 1.10Å | |
C3 | C4 | doub | 1.38Å | 1.39Å | Aromatic |
C3 | H3 | sing | 1.08Å | 1.10Å | |
C6 | C5 | doub | 1.38Å | 1.40Å | Aromatic |
C6 | H6 | sing | 1.08Å | 1.10Å | |
C5 | C4 | sing | 1.38Å | 1.39Å | Aromatic |
C5 | H5 | sing | 1.08Å | 1.10Å | |
C4 | CL4 | sing | 1.74Å | 1.81Å | |
OB1 | B | sing | 1.37Å | 1.50Å | |
OB1 | HOB1 | sing | 0.97Å | 0.95Å | |
OB2 | B | sing | 1.37Å | 1.48Å | |
OB2 | HOB2 | sing | 0.97Å | 0.95Å | |
C10 | O10 | doub | 1.21Å | 1.23Å | |
C10 | C11 | sing | 1.51Å | 1.52Å | |
C11 | H111 | sing | 1.09Å | 1.12Å | |
C11 | H112 | sing | 1.09Å | 1.11Å | |
C11 | H113 | sing | 1.09Å | 1.11Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CA | N | H | 111.1° | 106.7° |
CA | N | H2 | 111.6° | 106.7° |
N | CA | CB | 111.1° | 109.5° |
N | CA | C | 109.0° | 109.4° |
N | CA | HA | 108.3° | 109.5° |
H | N | H2 | 111.6° | 106.8° |
CB | CA | C | 108.3° | 109.5° |
CB | CA | HA | 109.0° | 109.5° |
CA | CB | OB3 | 112.8° | 109.5° |
CA | CB | HB2 | 111.0° | 109.5° |
CA | CB | HB3 | 111.0° | 109.4° |
C | CA | HA | 111.2° | 109.4° |
CA | C | O | 121.1° | 120.0° |
CA | C | OXT | 116.1° | 120.0° |
OB3 | CB | HB2 | 111.0° | 109.5° |
OB3 | CB | HB3 | 111.0° | 109.4° |
CB | OB3 | B | 109.7° | 106.8° |
HB2 | CB | HB3 | 99.3° | 109.5° |
OB3 | B | C8 | 98.2° | 109.5° |
OB3 | B | OB1 | 120.4° | 109.5° |
OB3 | B | OB2 | 120.0° | 109.5° |
O | C | OXT | 122.6° | 120.0° |
C | OXT | HXT | 116.1° | 120.0° |
C8 | N9 | C10 | 123.4° | 120.0° |
C8 | N9 | HN9 | 122.8° | 120.0° |
N9 | C8 | C7 | 107.8° | 109.5° |
N9 | C8 | B | 117.9° | 109.5° |
N9 | C8 | H8 | 102.3° | 109.5° |
C10 | N9 | HN9 | 113.7° | 120.0° |
N9 | C10 | O10 | 122.2° | 120.0° |
N9 | C10 | C11 | 119.1° | 120.0° |
C7 | C8 | B | 99.3° | 109.5° |
C7 | C8 | H8 | 120.1° | 109.5° |
C8 | C7 | C1 | 115.0° | 109.5° |
C8 | C7 | H71 | 110.2° | 109.5° |
C8 | C7 | H72 | 110.2° | 109.5° |
B | C8 | H8 | 110.4° | 109.5° |
C8 | B | OB1 | 101.3° | 109.4° |
C8 | B | OB2 | 97.7° | 109.5° |
C1 | C7 | H71 | 110.1° | 109.4° |
C1 | C7 | H72 | 110.1° | 109.5° |
C7 | C1 | C2 | 121.1° | 120.0° |
C7 | C1 | C6 | 121.2° | 120.0° |
H71 | C7 | H72 | 100.1° | 109.5° |
C2 | C1 | C6 | 117.6° | 120.1° |
C1 | C2 | C3 | 121.6° | 120.0° |
C1 | C2 | HC2 | 119.1° | 120.0° |
C1 | C6 | C5 | 121.4° | 120.0° |
C1 | C6 | H6 | 119.0° | 120.0° |
C3 | C2 | HC2 | 119.3° | 120.0° |
C2 | C3 | C4 | 119.7° | 120.0° |
C2 | C3 | H3 | 120.7° | 120.0° |
C4 | C3 | H3 | 119.6° | 120.0° |
C3 | C4 | C5 | 120.0° | 120.0° |
C3 | C4 | CL4 | 117.0° | 120.0° |
C5 | C6 | H6 | 119.5° | 120.0° |
C6 | C5 | C4 | 119.6° | 120.0° |
C6 | C5 | H5 | 120.6° | 120.0° |
C4 | C5 | H5 | 119.8° | 120.0° |
C5 | C4 | CL4 | 123.0° | 120.0° |
B | OB1 | HOB1 | 120.4° | 106.8° |
OB1 | B | OB2 | 112.3° | 109.5° |
B | OB2 | HOB2 | 120.0° | 106.8° |
O10 | C10 | C11 | 118.4° | 120.0° |
C10 | C11 | H111 | 119.1° | 109.5° |
C10 | C11 | H112 | 108.7° | 109.5° |
C10 | C11 | H113 | 108.7° | 109.4° |
H111 | C11 | H112 | 108.7° | 109.4° |
H111 | C11 | H113 | 108.7° | 109.5° |
H112 | C11 | H113 | 101.4° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
CA | N | H | H2 | 125.2° | 113.8° |
N | CA | CB | C | 119.6° | 120.0° |
N | CA | CB | HA | 119.3° | 120.1° |
N | CA | C | HA | 119.3° | 120.0° |
N | CA | CB | OB3 | 73.8° | 65.0° |
N | CA | CB | HB2 | 51.4° | 175.0° |
N | CA | CB | HB3 | 160.9° | 54.9° |
N | CA | C | O | 154.7° | 20.0° |
N | CA | C | OXT | 30.1° | 160.0° |
H | N | CA | CB | 180.0° | 173.8° |
H | N | CA | C | 60.8° | 53.8° |
H | N | CA | HA | 60.3° | 66.2° |
H2 | N | CA | CB | 54.7° | 59.9° |
H2 | N | CA | C | 174.0° | 60.1° |
H2 | N | CA | HA | 65.0° | 180.0° |
CB | CA | C | HA | 119.7° | 120.0° |
CA | CB | OB3 | HB2 | 125.3° | 120.1° |
CA | CB | OB3 | HB3 | 125.3° | 119.9° |
CA | CB | HB2 | HB3 | 116.9° | 120.0° |
CA | CB | OB3 | B | 111.2° | 180.0° |
CB | CA | C | O | 84.3° | 100.0° |
CB | CA | C | OXT | 90.8° | 80.0° |
C | CA | CB | OB3 | 166.5° | 175.0° |
C | CA | CB | HB2 | 68.2° | 55.0° |
C | CA | CB | HB3 | 41.3° | 65.0° |
CA | C | O | OXT | 174.9° | 180.0° |
CA | C | OXT | HXT | 180.0° | 180.0° |
HA | CA | CB | OB3 | 45.4° | 55.1° |
HA | CA | CB | HB2 | 170.7° | 65.0° |
HA | CA | CB | HB3 | 79.8° | 175.0° |
HA | CA | C | O | 35.4° | 140.0° |
HA | CA | C | OXT | 149.4° | 40.0° |
OB3 | CB | HB2 | HB3 | 116.8° | 120.0° |
CB | OB3 | B | C8 | 173.7° | 180.0° |
CB | OB3 | B | OB1 | 65.4° | 60.0° |
CB | OB3 | B | OB2 | 82.5° | 60.1° |
HB2 | CB | OB3 | B | 14.1° | 60.0° |
HB3 | CB | OB3 | B | 123.6° | 60.1° |
OB3 | B | C8 | N9 | 49.2° | 49.0° |
OB3 | B | C8 | C7 | 66.7° | 169.0° |
OB3 | B | C8 | OB1 | 123.4° | 120.0° |
OB3 | B | C8 | OB2 | 122.0° | 120.0° |
OB3 | B | C8 | H8 | 166.2° | 71.0° |
OB3 | B | OB1 | OB2 | 150.1° | 120.0° |
OB3 | B | OB1 | HOB1 | 180.0° | 60.0° |
OB3 | B | OB2 | HOB2 | 179.9° | 64.5° |
O | C | OXT | HXT | 4.9° | 0.0° |
C8 | N9 | C10 | HN9 | 179.9° | 180.0° |
N9 | C8 | C7 | B | 123.4° | 120.0° |
N9 | C8 | C7 | H8 | 116.4° | 120.0° |
N9 | C8 | B | H8 | 117.0° | 120.0° |
N9 | C8 | C7 | C1 | 70.1° | 180.0° |
N9 | C8 | C7 | H71 | 55.1° | 60.1° |
N9 | C8 | C7 | H72 | 164.7° | 60.0° |
N9 | C8 | B | OB1 | 172.6° | 169.0° |
N9 | C8 | B | OB2 | 72.8° | 71.0° |
C8 | N9 | C10 | O10 | 20.3° | 5.1° |
C8 | N9 | C10 | C11 | 165.8° | 174.9° |
C10 | N9 | C8 | C7 | 137.9° | 134.8° |
C10 | N9 | C8 | B | 110.9° | 105.2° |
C10 | N9 | C8 | H8 | 10.4° | 14.8° |
N9 | C10 | O10 | C11 | 174.0° | 180.0° |
N9 | C10 | C11 | H111 | 180.0° | 180.0° |
N9 | C10 | C11 | H112 | 54.8° | 60.0° |
N9 | C10 | C11 | H113 | 54.8° | 60.0° |
HN9 | N9 | C8 | C7 | 42.1° | 45.2° |
HN9 | N9 | C8 | B | 69.2° | 74.8° |
HN9 | N9 | C8 | H8 | 169.6° | 165.2° |
HN9 | N9 | C10 | O10 | 159.7° | 174.8° |
HN9 | N9 | C10 | C11 | 14.3° | 5.2° |
C7 | C8 | B | H8 | 127.1° | 120.0° |
C8 | C7 | C1 | H71 | 125.3° | 120.0° |
C8 | C7 | C1 | H72 | 125.3° | 120.0° |
C8 | C7 | H71 | H72 | 116.1° | 120.0° |
C8 | C7 | C1 | C2 | 21.0° | 90.0° |
C8 | C7 | C1 | C6 | 162.9° | 90.3° |
C7 | C8 | B | OB1 | 56.6° | 71.0° |
C7 | C8 | B | OB2 | 171.3° | 49.0° |
B | C8 | C7 | C1 | 166.5° | 60.0° |
B | C8 | C7 | H71 | 68.3° | 180.0° |
B | C8 | C7 | H72 | 41.3° | 60.0° |
C8 | B | OB1 | OB2 | 103.2° | 120.0° |
C8 | B | OB1 | HOB1 | 73.3° | 60.0° |
C8 | B | OB2 | HOB2 | 75.8° | 55.5° |
H8 | C8 | C7 | C1 | 46.3° | 60.0° |
H8 | C8 | C7 | H71 | 171.5° | 60.0° |
H8 | C8 | C7 | H72 | 79.0° | 180.0° |
H8 | C8 | B | OB1 | 70.4° | 49.0° |
H8 | C8 | B | OB2 | 44.2° | 169.0° |
C1 | C7 | H71 | H72 | 116.0° | 120.0° |
C7 | C1 | C2 | C6 | 176.3° | 179.7° |
C7 | C1 | C2 | C3 | 175.6° | 180.0° |
C7 | C1 | C2 | HC2 | 4.4° | 0.0° |
C7 | C1 | C6 | C5 | 175.6° | 179.7° |
C7 | C1 | C6 | H6 | 4.4° | 0.3° |
H71 | C7 | C1 | C2 | 146.2° | 30.0° |
H71 | C7 | C1 | C6 | 37.7° | 149.7° |
H72 | C7 | C1 | C2 | 104.3° | 150.0° |
H72 | C7 | C1 | C6 | 71.8° | 29.7° |
C1 | C2 | C3 | HC2 | 180.0° | 180.0° |
C1 | C2 | C3 | C4 | 0.0° | 0.0° |
C1 | C2 | C3 | H3 | 180.0° | 180.0° |
C2 | C1 | C6 | C5 | 0.7° | 0.5° |
C2 | C1 | C6 | H6 | 179.3° | 180.0° |
C6 | C1 | C2 | C3 | 0.7° | 0.3° |
C6 | C1 | C2 | HC2 | 179.3° | 179.7° |
C1 | C6 | C5 | H6 | 180.0° | 179.5° |
C1 | C6 | C5 | C4 | 0.0° | 0.6° |
C1 | C6 | C5 | H5 | 180.0° | 179.7° |
C2 | C3 | C4 | H3 | 180.0° | 180.0° |
C2 | C3 | C4 | C5 | 0.7° | 0.0° |
C2 | C3 | C4 | CL4 | 177.1° | 180.0° |
HC2 | C2 | C3 | C4 | 180.0° | 180.0° |
HC2 | C2 | C3 | H3 | 0.0° | 0.0° |
C3 | C4 | C5 | C6 | 0.7° | 0.3° |
C3 | C4 | C5 | CL4 | 177.7° | 180.0° |
C3 | C4 | C5 | H5 | 179.3° | 180.0° |
H3 | C3 | C4 | C5 | 179.3° | 179.9° |
H3 | C3 | C4 | CL4 | 2.9° | 0.1° |
C6 | C5 | C4 | H5 | 180.0° | 179.7° |
C6 | C5 | C4 | CL4 | 177.0° | 179.7° |
H6 | C6 | C5 | C4 | 180.0° | 180.0° |
H6 | C6 | C5 | H5 | 0.0° | 0.3° |
H5 | C5 | C4 | CL4 | 3.0° | 0.0° |
OB1 | B | OB2 | HOB2 | 29.8° | 175.5° |
HOB1 | OB1 | B | OB2 | 29.9° | 180.0° |
O10 | C10 | C11 | H111 | 5.8° | 0.0° |
O10 | C10 | C11 | H112 | 131.1° | 120.0° |
O10 | C10 | C11 | H113 | 119.4° | 120.0° |
C10 | C11 | H111 | H112 | 125.2° | 120.0° |
C10 | C11 | H111 | H113 | 125.2° | 120.0° |
C10 | C11 | H112 | H113 | 114.5° | 120.0° |
H111 | C11 | H112 | H113 | 114.4° | 120.0° |