CKZ
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| O3' | C3' | sing | 1.43Å | 1.43Å | |
| O4' | C4' | sing | 1.43Å | 1.44Å | |
| C3' | C4' | sing | 1.53Å | 1.51Å | |
| C3' | C2' | sing | 1.53Å | 1.54Å | |
| C4' | C5' | sing | 1.53Å | 1.57Å | |
| O2' | C2' | sing | 1.43Å | 1.44Å | |
| C2' | C1' | sing | 1.53Å | 1.53Å | |
| O6' | C6' | sing | 1.43Å | 1.44Å | |
| C5' | C6' | sing | 1.53Å | 1.51Å | |
| C5' | O5' | sing | 1.43Å | 1.45Å | |
| C1' | O5' | sing | 1.43Å | 1.43Å | |
| C1' | C1 | sing | 1.51Å | 1.50Å | |
| N2 | C1 | doub | 1.31Å | 1.33Å | Aromatic |
| N2 | N3 | sing | 1.29Å | 1.39Å | Aromatic |
| C1 | N5 | sing | 1.36Å | 1.35Å | Aromatic |
| N3 | C4 | doub | 1.31Å | 1.32Å | Aromatic |
| N5 | C4 | sing | 1.37Å | 1.36Å | Aromatic |
| C4 | C6 | sing | 1.48Å | 1.47Å | |
| C6 | C7 | sing | 1.40Å | 1.40Å | Aromatic |
| C6 | C11 | doub | 1.40Å | 1.39Å | Aromatic |
| C7 | C8 | doub | 1.38Å | 1.39Å | Aromatic |
| C11 | C10 | sing | 1.38Å | 1.39Å | Aromatic |
| C8 | C12 | sing | 1.51Å | 1.50Å | |
| C8 | C9 | sing | 1.39Å | 1.41Å | Aromatic |
| C10 | C9 | doub | 1.40Å | 1.37Å | Aromatic |
| C12 | C13 | sing | 1.51Å | 1.52Å | |
| C9 | C14 | sing | 1.48Å | 1.46Å | |
| C13 | C14 | sing | 1.39Å | 1.39Å | Aromatic |
| C13 | C15 | doub | 1.38Å | 1.40Å | Aromatic |
| C14 | C18 | doub | 1.40Å | 1.39Å | Aromatic |
| C15 | C16 | sing | 1.38Å | 1.39Å | Aromatic |
| C18 | C17 | sing | 1.38Å | 1.39Å | Aromatic |
| C16 | C17 | doub | 1.38Å | 1.38Å | Aromatic |
| C5' | H1 | sing | 1.09Å | 1.10Å | |
| C4' | H2 | sing | 1.09Å | 1.10Å | |
| C3' | H3 | sing | 1.09Å | 1.10Å | |
| C2' | H4 | sing | 1.09Å | 1.10Å | |
| C1' | H5 | sing | 1.09Å | 1.10Å | |
| O2' | H6 | sing | 0.97Å | 0.95Å | |
| O3' | H7 | sing | 0.97Å | 0.95Å | |
| O4' | H8 | sing | 0.97Å | 0.95Å | |
| C6' | H9 | sing | 1.09Å | 1.10Å | |
| C6' | H10 | sing | 1.09Å | 1.10Å | |
| O6' | H11 | sing | 0.97Å | 0.95Å | |
| N5 | H12 | sing | 0.97Å | 1.00Å | |
| C11 | H13 | sing | 1.08Å | 1.08Å | |
| C10 | H14 | sing | 1.08Å | 1.08Å | |
| C7 | H15 | sing | 1.08Å | 1.08Å | |
| C12 | H16 | sing | 1.09Å | 1.10Å | |
| C12 | H17 | sing | 1.09Å | 1.10Å | |
| C18 | H18 | sing | 1.08Å | 1.08Å | |
| C17 | H19 | sing | 1.08Å | 1.08Å | |
| C16 | H20 | sing | 1.08Å | 1.08Å | |
| C15 | H21 | sing | 1.08Å | 1.08Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O3' | C3' | C4' | 109.1° | 109.6° |
| O3' | C3' | C2' | 111.0° | 109.6° |
| O3' | C3' | H3 | 109.5° | 109.6° |
| C3' | O3' | H7 | 109.5° | 114.0° |
| O4' | C4' | C3' | 110.2° | 109.6° |
| O4' | C4' | C5' | 109.6° | 109.5° |
| O4' | C4' | H2 | 109.5° | 109.5° |
| C4' | O4' | H8 | 109.5° | 114.0° |
| C4' | C3' | C2' | 110.6° | 109.0° |
| C3' | C4' | C5' | 111.2° | 109.2° |
| C3' | C4' | H2 | 108.5° | 109.5° |
| C4' | C3' | H3 | 108.4° | 109.5° |
| C3' | C2' | O2' | 111.5° | 109.5° |
| C3' | C2' | C1' | 110.8° | 109.1° |
| C2' | C3' | H3 | 108.1° | 109.5° |
| C3' | C2' | H4 | 107.8° | 109.5° |
| C4' | C5' | C6' | 113.5° | 109.5° |
| C4' | C5' | O5' | 110.0° | 109.4° |
| C4' | C5' | H1 | 108.1° | 109.4° |
| C5' | C4' | H2 | 107.8° | 109.5° |
| O2' | C2' | C1' | 109.7° | 109.5° |
| O2' | C2' | H4 | 109.1° | 109.6° |
| C2' | O2' | H6 | 109.5° | 114.0° |
| C2' | C1' | O5' | 109.7° | 109.4° |
| C2' | C1' | C1 | 111.4° | 109.5° |
| C1' | C2' | H4 | 107.8° | 109.5° |
| C2' | C1' | H5 | 108.8° | 109.5° |
| O6' | C6' | C5' | 113.1° | 109.5° |
| O6' | C6' | H9 | 108.6° | 109.5° |
| O6' | C6' | H10 | 108.6° | 109.5° |
| C6' | O6' | H11 | 109.5° | 114.0° |
| C6' | C5' | O5' | 106.6° | 109.5° |
| C6' | C5' | H1 | 108.9° | 109.5° |
| C5' | C6' | H9 | 108.5° | 109.5° |
| C5' | C6' | H10 | 108.5° | 109.5° |
| C5' | O5' | C1' | 111.4° | 114.1° |
| O5' | C5' | H1 | 109.7° | 109.5° |
| O5' | C1' | C1 | 107.5° | 109.5° |
| O5' | C1' | H5 | 110.2° | 109.5° |
| C1' | C1 | N2 | 126.7° | 126.3° |
| C1' | C1 | N5 | 125.2° | 126.3° |
| C1 | C1' | H5 | 109.2° | 109.5° |
| C1 | N2 | N3 | 107.9° | 110.1° |
| N2 | C1 | N5 | 108.0° | 107.4° |
| N2 | N3 | C4 | 107.4° | 109.7° |
| C1 | N5 | C4 | 107.9° | 105.8° |
| C1 | N5 | H12 | 126.1° | 127.0° |
| N3 | C4 | N5 | 108.8° | 107.0° |
| N3 | C4 | C6 | 127.6° | 126.5° |
| N5 | C4 | C6 | 123.6° | 126.5° |
| C4 | N5 | H12 | 126.1° | 127.2° |
| C4 | C6 | C7 | 122.9° | 120.1° |
| C4 | C6 | C11 | 117.8° | 120.1° |
| C7 | C6 | C11 | 119.3° | 119.8° |
| C6 | C7 | C8 | 118.5° | 119.9° |
| C6 | C7 | H15 | 120.8° | 120.0° |
| C6 | C11 | C10 | 122.2° | 120.1° |
| C6 | C11 | H13 | 118.9° | 120.0° |
| C7 | C8 | C12 | 129.9° | 132.1° |
| C7 | C8 | C9 | 120.9° | 120.4° |
| C8 | C7 | H15 | 120.8° | 120.0° |
| C11 | C10 | C9 | 118.4° | 120.2° |
| C10 | C11 | H13 | 118.9° | 119.9° |
| C11 | C10 | H14 | 120.8° | 120.0° |
| C12 | C8 | C9 | 109.2° | 107.5° |
| C8 | C12 | C13 | 102.9° | 106.1° |
| C8 | C12 | H16 | 111.1° | 110.2° |
| C8 | C12 | H17 | 111.1° | 110.1° |
| C8 | C9 | C10 | 120.7° | 119.6° |
| C8 | C9 | C14 | 109.6° | 109.4° |
| C10 | C9 | C14 | 129.7° | 131.0° |
| C9 | C10 | H14 | 120.8° | 119.9° |
| C12 | C13 | C14 | 110.4° | 107.5° |
| C12 | C13 | C15 | 129.7° | 132.2° |
| C13 | C12 | H16 | 111.1° | 110.1° |
| C13 | C12 | H17 | 111.1° | 110.2° |
| C9 | C14 | C13 | 107.9° | 109.5° |
| C9 | C14 | C18 | 130.9° | 131.1° |
| C14 | C13 | C15 | 119.9° | 120.3° |
| C13 | C14 | C18 | 121.1° | 119.4° |
| C13 | C15 | C16 | 118.6° | 120.0° |
| C13 | C15 | H21 | 120.7° | 119.9° |
| C14 | C18 | C17 | 118.4° | 119.9° |
| C14 | C18 | H18 | 120.8° | 120.0° |
| C15 | C16 | C17 | 121.1° | 120.1° |
| C15 | C16 | H20 | 119.5° | 119.9° |
| C16 | C15 | H21 | 120.7° | 120.0° |
| C18 | C17 | C16 | 120.9° | 120.3° |
| C17 | C18 | H18 | 120.8° | 120.0° |
| C18 | C17 | H19 | 119.5° | 119.8° |
| C16 | C17 | H19 | 119.5° | 119.9° |
| C17 | C16 | H20 | 119.5° | 119.9° |
| H9 | C6' | H10 | 109.5° | 109.5° |
| H16 | C12 | H17 | 109.5° | 110.1° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O3' | C3' | C4' | O4' | 66.5° | 63.2° |
| O3' | C3' | C4' | C2' | 122.4° | 119.9° |
| O3' | C3' | C4' | H3 | 119.2° | 120.3° |
| O3' | C3' | C2' | H3 | 120.1° | 120.3° |
| O3' | C3' | C4' | C5' | 171.7° | 176.8° |
| O3' | C3' | C2' | O2' | 64.5° | 63.2° |
| O3' | C3' | C2' | C1' | 173.0° | 176.9° |
| O3' | C3' | C4' | H2 | 53.3° | 57.0° |
| O3' | C3' | C2' | H4 | 55.2° | 57.0° |
| O4' | C4' | C3' | C5' | 121.8° | 120.0° |
| O4' | C4' | C3' | H2 | 119.8° | 120.2° |
| O4' | C4' | C3' | C2' | 171.1° | 176.9° |
| O4' | C4' | C5' | H2 | 119.1° | 120.1° |
| O4' | C4' | C5' | C6' | 64.6° | 62.4° |
| O4' | C4' | C5' | O5' | 176.2° | 177.6° |
| O4' | C4' | C5' | H1 | 56.4° | 57.6° |
| O4' | C4' | C3' | H3 | 52.7° | 57.1° |
| C4' | C3' | C2' | H3 | 118.6° | 119.8° |
| C3' | C4' | C5' | H2 | 118.8° | 119.9° |
| C4' | C3' | C2' | O2' | 174.3° | 176.9° |
| C4' | C3' | C2' | C1' | 51.7° | 57.0° |
| C3' | C4' | C5' | C6' | 173.3° | 177.6° |
| C3' | C4' | C5' | O5' | 54.1° | 57.6° |
| C3' | C4' | C5' | H1 | 65.7° | 62.4° |
| C4' | C3' | C2' | H4 | 66.1° | 63.0° |
| C4' | C3' | O3' | H7 | 180.0° | 180.0° |
| C3' | C4' | O4' | H8 | 180.0° | 60.2° |
| C2' | C3' | C4' | C5' | 49.3° | 56.9° |
| C3' | C2' | O2' | C1' | 123.2° | 119.7° |
| C3' | C2' | O2' | H4 | 118.9° | 120.1° |
| C3' | C2' | C1' | H4 | 117.7° | 119.9° |
| C3' | C2' | C1' | O5' | 58.6° | 57.6° |
| C3' | C2' | C1' | C1 | 177.5° | 177.6° |
| C2' | C3' | C4' | H2 | 69.1° | 62.9° |
| C3' | C2' | C1' | H5 | 62.0° | 62.4° |
| C3' | C2' | O2' | H6 | 180.0° | 60.0° |
| C2' | C3' | O3' | H7 | 57.8° | 60.4° |
| C4' | C5' | C6' | O6' | 45.8° | 175.0° |
| C4' | C5' | C6' | O5' | 121.2° | 120.0° |
| C4' | C5' | C6' | H1 | 120.5° | 120.0° |
| C4' | C5' | O5' | H1 | 118.8° | 119.9° |
| C4' | C5' | O5' | C1' | 62.0° | 61.1° |
| C5' | C4' | C3' | H3 | 69.1° | 62.9° |
| C5' | C4' | O4' | H8 | 57.3° | 180.0° |
| C4' | C5' | C6' | H9 | 74.8° | 55.0° |
| C4' | C5' | C6' | H10 | 166.3° | 65.0° |
| O2' | C2' | C1' | H4 | 118.7° | 120.2° |
| O2' | C2' | C1' | O5' | 177.8° | 177.5° |
| O2' | C2' | C1' | C1 | 58.9° | 62.5° |
| O2' | C2' | C3' | H3 | 55.7° | 57.0° |
| O2' | C2' | C1' | H5 | 61.6° | 57.5° |
| C2' | C1' | O5' | C5' | 64.6° | 61.2° |
| C2' | C1' | O5' | C1 | 121.3° | 120.0° |
| C2' | C1' | O5' | H5 | 119.7° | 120.0° |
| C2' | C1' | C1 | H5 | 120.2° | 120.0° |
| C2' | C1' | C1 | N2 | 39.3° | 55.3° |
| C2' | C1' | C1 | N5 | 140.6° | 125.0° |
| C1' | C2' | C3' | H3 | 66.9° | 62.9° |
| C1' | C2' | O2' | H6 | 56.8° | 179.7° |
| O6' | C6' | C5' | H9 | 120.5° | 120.0° |
| O6' | C6' | C5' | H10 | 120.6° | 120.0° |
| O6' | C6' | C5' | O5' | 75.4° | 65.0° |
| O6' | C6' | C5' | H1 | 166.3° | 55.0° |
| O6' | C6' | H9 | H10 | 118.4° | 120.0° |
| C6' | C5' | O5' | H1 | 117.8° | 120.1° |
| C6' | C5' | O5' | C1' | 174.6° | 178.9° |
| C6' | C5' | C4' | H2 | 54.5° | 57.7° |
| C5' | C6' | H9 | H10 | 118.3° | 120.0° |
| C5' | C6' | O6' | H11 | 180.0° | 180.0° |
| C5' | O5' | C1' | C1 | 174.1° | 178.9° |
| O5' | C5' | C4' | H2 | 64.7° | 62.3° |
| C5' | O5' | C1' | H5 | 55.1° | 58.8° |
| O5' | C5' | C6' | H9 | 164.0° | 175.0° |
| O5' | C5' | C6' | H10 | 45.1° | 55.0° |
| O5' | C1' | C1 | H5 | 119.6° | 120.1° |
| O5' | C1' | C1 | N2 | 80.9° | 64.7° |
| O5' | C1' | C1 | N5 | 99.2° | 115.1° |
| C1' | O5' | C5' | H1 | 56.8° | 58.8° |
| O5' | C1' | C2' | H4 | 59.2° | 62.3° |
| C1' | C1 | N2 | N5 | 179.9° | 179.8° |
| C1' | C1 | N2 | N3 | 179.3° | 179.9° |
| C1' | C1 | N5 | C4 | 179.0° | 180.0° |
| C1 | C1' | C2' | H4 | 59.8° | 57.7° |
| C1' | C1 | N5 | H12 | 1.0° | 0.0° |
| C1 | N2 | N3 | C4 | 0.3° | 0.3° |
| N2 | C1 | N5 | C4 | 1.1° | 0.2° |
| N2 | C1 | C1' | H5 | 159.5° | 175.3° |
| N2 | C1 | N5 | H12 | 178.9° | 179.8° |
| N3 | N2 | C1 | N5 | 0.8° | 0.3° |
| N2 | N3 | C4 | N5 | 0.4° | 0.2° |
| N2 | N3 | C4 | C6 | 179.9° | 179.8° |
| C1 | N5 | C4 | N3 | 0.9° | 0.0° |
| C1 | N5 | C4 | H12 | 180.0° | 180.0° |
| C1 | N5 | C4 | C6 | 179.5° | 180.0° |
| N5 | C1 | C1' | H5 | 20.4° | 5.0° |
| N3 | C4 | N5 | C6 | 179.5° | 180.0° |
| N3 | C4 | C6 | C7 | 12.3° | 0.0° |
| N3 | C4 | C6 | C11 | 164.9° | 179.7° |
| N3 | C4 | N5 | H12 | 179.1° | 180.0° |
| N5 | C4 | C6 | C7 | 167.1° | 180.0° |
| N5 | C4 | C6 | C11 | 15.6° | 0.3° |
| C4 | C6 | C7 | C11 | 177.2° | 179.7° |
| C4 | C6 | C7 | C8 | 179.6° | 179.7° |
| C4 | C6 | C11 | C10 | 179.5° | 180.0° |
| C6 | C4 | N5 | H12 | 0.5° | 0.0° |
| C4 | C6 | C11 | H13 | 0.5° | 0.0° |
| C4 | C6 | C7 | H15 | 0.5° | 0.0° |
| C6 | C7 | C8 | H15 | 180.0° | 179.7° |
| C7 | C6 | C11 | C10 | 3.1° | 0.3° |
| C6 | C7 | C8 | C12 | 177.5° | 179.8° |
| C6 | C7 | C8 | C9 | 0.7° | 0.6° |
| C7 | C6 | C11 | H13 | 176.9° | 179.7° |
| C11 | C6 | C7 | C8 | 2.4° | 0.6° |
| C6 | C11 | C10 | H13 | 180.0° | 180.0° |
| C6 | C11 | C10 | C9 | 2.1° | 0.0° |
| C6 | C11 | C10 | H14 | 178.0° | 180.0° |
| C11 | C6 | C7 | H15 | 177.7° | 179.7° |
| C7 | C8 | C12 | C9 | 178.4° | 179.7° |
| C7 | C8 | C9 | C10 | 0.4° | 0.3° |
| C7 | C8 | C12 | C13 | 179.7° | 179.7° |
| C7 | C8 | C9 | C14 | 179.5° | 179.7° |
| C7 | C8 | C12 | H16 | 60.8° | 60.5° |
| C7 | C8 | C12 | H17 | 61.4° | 61.2° |
| C11 | C10 | C9 | C8 | 0.3° | 0.0° |
| C11 | C10 | C9 | H14 | 180.0° | 180.0° |
| C11 | C10 | C9 | C14 | 178.6° | 180.0° |
| C12 | C8 | C9 | C10 | 179.0° | 180.0° |
| C8 | C12 | C13 | H16 | 118.9° | 119.2° |
| C8 | C12 | C13 | H17 | 119.0° | 119.2° |
| C12 | C8 | C9 | C14 | 1.9° | 0.0° |
| C8 | C12 | C13 | C14 | 1.2° | 0.0° |
| C8 | C12 | C13 | C15 | 178.1° | 180.0° |
| C12 | C8 | C7 | H15 | 2.4° | 0.1° |
| C8 | C12 | H16 | H17 | 123.1° | 121.7° |
| C8 | C9 | C10 | C14 | 178.9° | 180.0° |
| C9 | C8 | C12 | C13 | 1.9° | 0.0° |
| C8 | C9 | C14 | C13 | 1.1° | 0.0° |
| C8 | C9 | C14 | C18 | 176.4° | 180.0° |
| C8 | C9 | C10 | H14 | 179.8° | 180.0° |
| C9 | C8 | C7 | H15 | 179.4° | 179.7° |
| C9 | C8 | C12 | H16 | 120.8° | 119.1° |
| C9 | C8 | C12 | H17 | 117.0° | 119.2° |
| C10 | C9 | C14 | C13 | 179.9° | 180.0° |
| C10 | C9 | C14 | C18 | 2.6° | 0.0° |
| C9 | C10 | C11 | H13 | 178.0° | 180.0° |
| C12 | C13 | C14 | C9 | 0.1° | 0.0° |
| C12 | C13 | C14 | C15 | 179.4° | 180.0° |
| C12 | C13 | C14 | C18 | 178.0° | 180.0° |
| C12 | C13 | C15 | C16 | 178.5° | 179.9° |
| C13 | C12 | H16 | H17 | 123.0° | 121.6° |
| C12 | C13 | C15 | H21 | 1.6° | 0.0° |
| C9 | C14 | C13 | C18 | 177.8° | 180.0° |
| C9 | C14 | C13 | C15 | 179.3° | 180.0° |
| C9 | C14 | C18 | C17 | 178.0° | 180.0° |
| C14 | C9 | C10 | H14 | 1.3° | 0.0° |
| C9 | C14 | C18 | H18 | 2.0° | 0.0° |
| C14 | C13 | C15 | C16 | 0.8° | 0.1° |
| C13 | C14 | C18 | C17 | 0.7° | 0.0° |
| C14 | C13 | C12 | H16 | 120.2° | 119.2° |
| C14 | C13 | C12 | H17 | 117.7° | 119.1° |
| C13 | C14 | C18 | H18 | 179.3° | 180.0° |
| C14 | C13 | C15 | H21 | 179.1° | 179.9° |
| C15 | C13 | C14 | C18 | 1.5° | 0.0° |
| C13 | C15 | C16 | H21 | 180.0° | 179.9° |
| C13 | C15 | C16 | C17 | 0.5° | 0.1° |
| C15 | C13 | C12 | H16 | 59.2° | 60.8° |
| C15 | C13 | C12 | H17 | 62.9° | 60.8° |
| C13 | C15 | C16 | H20 | 179.5° | 180.0° |
| C14 | C18 | C17 | H18 | 180.0° | 180.0° |
| C14 | C18 | C17 | C16 | 0.6° | 0.0° |
| C14 | C18 | C17 | H19 | 179.4° | 180.0° |
| C15 | C16 | C17 | C18 | 1.2° | 0.1° |
| C15 | C16 | C17 | H20 | 180.0° | 179.9° |
| C15 | C16 | C17 | H19 | 178.8° | 179.9° |
| C18 | C17 | C16 | H19 | 180.0° | 180.0° |
| C18 | C17 | C16 | H20 | 178.8° | 180.0° |
| C16 | C17 | C18 | H18 | 179.4° | 180.0° |
| C17 | C16 | C15 | H21 | 179.5° | 180.0° |
| H1 | C5' | C4' | H2 | 175.5° | 177.7° |
| H1 | C5' | C6' | H9 | 45.7° | 65.0° |
| H1 | C5' | C6' | H10 | 73.2° | 175.1° |
| H2 | C4' | C3' | H3 | 172.5° | 177.3° |
| H2 | C4' | O4' | H8 | 60.8° | 59.9° |
| H3 | C3' | C2' | H4 | 175.3° | 177.2° |
| H3 | C3' | O3' | H7 | 61.5° | 59.8° |
| H4 | C2' | C1' | H5 | 179.8° | 177.7° |
| H4 | C2' | O2' | H6 | 61.1° | 60.1° |
| H9 | C6' | O6' | H11 | 59.4° | 60.0° |
| H10 | C6' | O6' | H11 | 59.5° | 60.1° |
| H13 | C11 | C10 | H14 | 2.0° | 0.0° |
| H18 | C18 | C17 | H19 | 0.6° | 0.1° |
| H19 | C17 | C16 | H20 | 1.2° | 0.0° |
| H20 | C16 | C15 | H21 | 0.5° | 0.1° |
