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CH5

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2sing1.53Å1.54Å
C1O3Psing1.43Å1.48Å
C1H11sing1.09Å1.12Å
C1H12sing1.09Å1.11Å
C2C3sing1.53Å1.55Å
C2O2sing1.43Å1.51Å
C2H2sing1.09Å1.11Å
C3O3sing1.43Å1.48Å
C3H31sing1.09Å1.11Å
C3H32sing1.09Å1.12Å
C4C5sing1.53Å1.57Å
C4O4Psing1.43Å1.49Å
C4H41sing1.09Å1.11Å
C4H42sing1.09Å1.12Å
C5Nsing1.47Å1.54Å
C5H51sing1.09Å1.11Å
C5H52sing1.09Å1.12Å
C6Nsing1.47Å1.49Å
C6H61sing1.09Å1.12Å
C6H62sing1.09Å1.12Å
C6H63sing1.09Å1.11Å
C7Nsing1.47Å1.45Å
C7H71sing1.09Å1.12Å
C7H72sing1.09Å1.12Å
C7H73sing1.09Å1.12Å
C8Nsing1.47Å1.47Å
C8H81sing1.09Å1.12Å
C8H82sing1.09Å1.11Å
C8H83sing1.09Å1.11Å
O2HO2sing0.97Å0.95Å
O3HO3sing0.97Å0.95Å
O1PPdoub1.48Å1.56Å
O2PPsing1.61Å1.54Å
O2PH2Psing0.97Å0.95Å
O3PPsing1.61Å1.59Å
O4PPsing1.61Å1.58Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1O3P111.5°109.5°
C2C1H11111.4°109.5°
C2C1H12111.5°109.5°
C1C2C3115.0°109.5°
C1C2O2108.0°109.4°
C1C2H2107.5°109.5°
O3PC1H11111.5°109.5°
O3PC1H12111.5°109.5°
C1O3PP115.7°106.8°
H11C1H1298.9°109.5°
C3C2O2111.8°109.5°
C3C2H2103.3°109.5°
C2C3O3116.2°109.5°
C2C3H31109.8°109.5°
C2C3H32109.8°109.5°
O2C2H2111.0°109.5°
C2O2HO2108.1°106.8°
O3C3H31109.7°109.4°
O3C3H32109.7°109.5°
C3O3HO3116.2°106.8°
H31C3H32100.4°109.5°
C5C4O4P108.9°109.5°
C5C4H41112.4°109.5°
C5C4H42112.4°109.5°
C4C5N121.5°109.5°
C4C5H51107.9°109.4°
C4C5H52107.9°109.4°
O4PC4H41112.5°109.5°
O4PC4H42112.4°109.4°
C4O4PP114.5°106.8°
H41C4H4298.0°109.5°
NC5H51107.9°109.5°
NC5H52107.9°109.5°
C5NC6115.0°109.5°
C5NC7108.5°109.5°
C5NC8109.8°109.5°
H51C5H52101.9°109.5°
NC6H61114.9°109.5°
NC6H62110.2°109.5°
NC6H63110.2°109.5°
C6NC7107.9°109.4°
C6NC8109.5°109.4°
H61C6H62110.2°109.4°
H61C6H63110.3°109.5°
H62C6H63100.0°109.4°
NC7H71108.6°109.5°
NC7H72112.6°109.4°
NC7H73112.6°109.4°
C7NC8105.7°109.4°
H71C7H72112.5°109.5°
H71C7H73112.5°109.5°
H72C7H7397.9°109.5°
NC8H81109.8°109.5°
NC8H82112.1°109.4°
NC8H83112.1°109.5°
H81C8H82112.1°109.4°
H81C8H83112.0°109.5°
H82C8H8398.4°109.5°
O1PPO2P108.8°109.5°
O1PPO3P108.9°109.5°
O1PPO4P108.2°109.5°
PO2PH2P108.9°106.9°
O2PPO3P109.9°109.4°
O2PPO4P108.3°109.5°
O3PPO4P112.6°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1O3PH11125.2°120.0°
C2C1O3PH12125.3°120.0°
C2C1H11H12117.4°120.0°
C1C2C3O2123.7°119.9°
C1C2C3H2116.9°120.0°
C1C2O2H2117.7°120.0°
C1C2C3O3123.7°175.0°
C1C2C3H31111.1°55.1°
C1C2C3H321.6°65.0°
C1C2O2HO2180.0°60.0°
C2C1O3PP121.5°180.0°
O3PC1H11H12117.4°120.1°
O3PC1C2C3141.2°175.0°
O3PC1C2O215.6°65.0°
O3PC1C2H2104.3°55.0°
C1O3PPO1P57.6°55.0°
C1O3PPO2P61.5°65.0°
C1O3PPO4P177.6°175.0°
H11C1C2C316.0°55.0°
H11C1C2O2109.7°175.0°
H11C1C2H2130.4°65.0°
H11C1O3PP3.7°60.1°
H12C1C2C393.5°65.0°
H12C1C2O2140.9°55.0°
H12C1C2H221.0°175.0°
H12C1O3PP113.2°60.0°
C3C2O2H2114.8°120.1°
C2C3O3H31125.3°120.0°
C2C3O3H32125.3°120.1°
C2C3H31H32115.6°120.1°
C3C2O2HO252.4°59.9°
C2C3O3HO3180.0°180.0°
O2C2C3O30.0°65.1°
O2C2C3H31125.2°175.0°
O2C2C3H32125.3°54.9°
H2C2C3O3119.5°55.0°
H2C2C3H315.8°64.9°
H2C2C3H32115.3°175.0°
H2C2O2HO262.4°180.0°
O3C3H31H32115.5°120.0°
H31C3O3HO354.7°60.0°
H32C3O3HO354.7°60.0°
C5C4O4PH41125.3°120.1°
C5C4O4PH42125.2°120.0°
C5C4H41H42118.3°120.0°
C4C5NH51125.3°120.0°
C4C5NH52125.3°120.0°
C4C5H51H52113.5°119.9°
C4C5NC630.3°55.2°
C4C5NC7151.3°64.8°
C4C5NC893.6°175.2°
C5C4O4PP99.1°180.0°
O4PC4H41H42118.4°120.0°
O4PC4C5N179.7°67.6°
O4PC4C5H5154.4°52.4°
O4PC4C5H5255.1°172.4°
C4O4PPO1P74.0°55.0°
C4O4PPO2P43.8°65.0°
C4O4PPO3P165.6°175.1°
H41C4C5N54.4°172.3°
H41C4C5H5170.9°67.6°
H41C4C5H52179.6°52.3°
H41C4O4PP135.7°60.0°
H42C4C5N55.1°52.3°
H42C4C5H51179.6°172.4°
H42C4C5H5270.2°67.7°
H42C4O4PP26.1°60.0°
NC5H51H52113.5°120.1°
C5NC6C7121.3°120.0°
C5NC6C8124.2°120.0°
C5NC6H61180.0°59.9°
C5NC6H6254.8°60.0°
C5NC6H6354.7°180.0°
C5NC7C8117.7°120.0°
C5NC7H71180.0°170.0°
C5NC7H7254.7°49.9°
C5NC7H7354.8°70.0°
C5NC8H81180.0°60.0°
C5NC8H8254.8°59.9°
C5NC8H8354.8°180.0°
H51C5NC6155.7°175.2°
H51C5NC783.4°55.2°
H51C5NC831.7°64.8°
H52C5NC694.9°64.7°
H52C5NC726.0°175.3°
H52C5NC8141.1°55.3°
NC6H61H62125.2°120.0°
NC6H61H63125.3°120.1°
NC6H62H63116.1°120.1°
C6NC7C8117.1°119.9°
C6NC7H7154.8°70.0°
C6NC7H72179.9°170.0°
C6NC7H7370.4°50.0°
C6NC8H8152.9°60.1°
C6NC8H8272.3°180.0°
C6NC8H83178.1°60.0°
H61C6H62H63116.1°119.9°
H61C6NC758.7°60.1°
H61C6NC855.9°180.0°
H62C6NC766.5°180.0°
H62C6NC8178.9°60.1°
H63C6NC7176.0°60.0°
H63C6NC869.4°59.9°
NC7H71H72125.3°120.0°
NC7H71H73125.3°120.0°
NC7H72H73118.5°119.9°
C7NC8H8163.1°180.0°
C7NC8H82171.6°60.1°
C7NC8H8362.1°59.9°
H71C7H72H73118.4°120.1°
H71C7NC862.3°49.9°
H72C7NC863.0°70.1°
H73C7NC8172.5°169.9°
NC8H81H82125.3°119.9°
NC8H81H83125.2°120.1°
NC8H82H83118.0°120.1°
H81C8H82H83118.0°120.0°
O1PPO2PO3P119.2°120.0°
O1PPO2PO4P117.4°120.0°
O1PPO2PH2P180.0°180.0°
O1PPO3PO4P120.0°120.0°
O2PPO3PO4P120.9°120.0°
H2PO2PPO3P60.8°60.0°
H2PO2PPO4P62.6°59.9°

224931

PDB entries from 2024-09-11

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