CGT
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C1 | S1 | sing | 1.81Å | 1.81Å | |
C1 | C2 | sing | 1.53Å | 1.52Å | |
C1 | C7 | sing | 1.53Å | 1.49Å | |
C1 | H1 | sing | 1.09Å | 1.12Å | |
S1 | C13 | sing | 1.76Å | 1.74Å | |
C2 | O2 | sing | 1.43Å | 1.42Å | |
C2 | C3 | sing | 1.53Å | 1.52Å | |
C2 | H2 | sing | 1.09Å | 1.12Å | |
O2 | HA | sing | 0.97Å | 0.95Å | |
C3 | O3 | sing | 1.43Å | 1.42Å | |
C3 | C4 | sing | 1.53Å | 1.53Å | |
C3 | H3 | sing | 1.09Å | 1.12Å | |
O3 | HB | sing | 0.97Å | 0.95Å | |
C4 | O4 | sing | 1.43Å | 1.42Å | |
C4 | C5 | sing | 1.53Å | 1.53Å | |
C4 | H4 | sing | 1.09Å | 1.11Å | |
O4 | HC | sing | 0.97Å | 0.95Å | |
C5 | C7 | sing | 1.53Å | 1.50Å | |
C5 | C6 | sing | 1.53Å | 1.52Å | |
C5 | H5 | sing | 1.09Å | 1.12Å | |
C7 | H7C1 | sing | 1.09Å | 1.12Å | |
C7 | H7C2 | sing | 1.09Å | 1.11Å | |
C6 | O6 | sing | 1.43Å | 1.42Å | |
C6 | H6C1 | sing | 1.09Å | 1.11Å | |
C6 | H6C2 | sing | 1.09Å | 1.12Å | |
O6 | H6 | sing | 0.97Å | 0.95Å | |
CB | CG | sing | 1.51Å | 1.50Å | |
CB | C13 | sing | 1.51Å | 1.51Å | |
CB | HBC1 | sing | 1.09Å | 1.11Å | |
CB | HBC2 | sing | 1.09Å | 1.11Å | |
CG | CD1 | doub | 1.38Å | 1.39Å | Aromatic |
CG | CD2 | sing | 1.38Å | 1.39Å | Aromatic |
CD1 | CE1 | sing | 1.38Å | 1.39Å | Aromatic |
CD1 | HD1 | sing | 1.08Å | 1.10Å | |
CD2 | CE2 | doub | 1.38Å | 1.39Å | Aromatic |
CD2 | HD2 | sing | 1.08Å | 1.10Å | |
CE1 | CZ | doub | 1.38Å | 1.39Å | Aromatic |
CE1 | HE1 | sing | 1.08Å | 1.10Å | |
CE2 | CZ | sing | 1.38Å | 1.39Å | Aromatic |
CE2 | HE2 | sing | 1.08Å | 1.10Å | |
CZ | HZ | sing | 1.08Å | 1.10Å | |
C13 | N17 | doub | 1.29Å | 1.28Å | |
N17 | O18 | sing | 1.42Å | 1.43Å | |
O18 | S19 | sing | 1.52Å | 1.50Å | |
S19 | O20 | doub | 1.42Å | 1.48Å | |
S19 | O21 | doub | 1.42Å | 1.47Å | |
S19 | O22 | sing | 1.52Å | 1.48Å | |
O22 | H22 | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
S1 | C1 | C2 | 109.5° | 109.5° |
S1 | C1 | C7 | 110.4° | 109.4° |
S1 | C1 | H1 | 109.4° | 109.5° |
C1 | S1 | C13 | 103.3° | 100.0° |
C2 | C1 | C7 | 108.8° | 109.5° |
C2 | C1 | H1 | 109.4° | 109.5° |
C1 | C2 | O2 | 109.5° | 109.5° |
C1 | C2 | C3 | 109.9° | 109.5° |
C1 | C2 | H2 | 109.4° | 109.5° |
C7 | C1 | H1 | 109.4° | 109.5° |
C1 | C7 | C5 | 108.3° | 109.5° |
C1 | C7 | H7C1 | 112.7° | 109.5° |
C1 | C7 | H7C2 | 112.7° | 109.5° |
S1 | C13 | CB | 126.5° | 120.0° |
S1 | C13 | N17 | 121.5° | 120.0° |
O2 | C2 | C3 | 109.3° | 109.5° |
O2 | C2 | H2 | 109.4° | 109.5° |
C2 | O2 | HA | 109.4° | 106.8° |
C3 | C2 | H2 | 109.4° | 109.5° |
C2 | C3 | O3 | 109.6° | 109.5° |
C2 | C3 | C4 | 111.0° | 109.5° |
C2 | C3 | H3 | 109.0° | 109.5° |
O3 | C3 | C4 | 109.3° | 109.4° |
O3 | C3 | H3 | 109.0° | 109.5° |
C3 | O3 | HB | 109.6° | 106.8° |
C4 | C3 | H3 | 109.0° | 109.4° |
C3 | C4 | O4 | 108.7° | 109.5° |
C3 | C4 | C5 | 111.5° | 109.5° |
C3 | C4 | H4 | 109.1° | 109.5° |
O4 | C4 | C5 | 109.2° | 109.5° |
O4 | C4 | H4 | 109.1° | 109.5° |
C4 | O4 | HC | 108.7° | 106.8° |
C5 | C4 | H4 | 109.2° | 109.4° |
C4 | C5 | C7 | 109.6° | 109.5° |
C4 | C5 | C6 | 112.4° | 109.5° |
C4 | C5 | H5 | 108.7° | 109.4° |
C7 | C5 | C6 | 108.6° | 109.5° |
C7 | C5 | H5 | 108.7° | 109.5° |
C5 | C7 | H7C1 | 112.6° | 109.4° |
C5 | C7 | H7C2 | 112.7° | 109.5° |
C6 | C5 | H5 | 108.7° | 109.5° |
C5 | C6 | O6 | 111.2° | 109.5° |
C5 | C6 | H6C1 | 111.6° | 109.4° |
C5 | C6 | H6C2 | 111.5° | 109.5° |
H7C1 | C7 | H7C2 | 97.8° | 109.5° |
O6 | C6 | H6C1 | 111.6° | 109.5° |
O6 | C6 | H6C2 | 111.6° | 109.5° |
C6 | O6 | H6 | 111.2° | 106.8° |
H6C1 | C6 | H6C2 | 98.8° | 109.5° |
CG | CB | C13 | 110.2° | 109.5° |
CG | CB | HBC1 | 111.9° | 109.4° |
CG | CB | HBC2 | 111.9° | 109.4° |
CB | CG | CD1 | 120.4° | 120.0° |
CB | CG | CD2 | 120.8° | 120.0° |
C13 | CB | HBC1 | 111.9° | 109.5° |
C13 | CB | HBC2 | 111.9° | 109.5° |
CB | C13 | N17 | 111.9° | 120.0° |
HBC1 | CB | HBC2 | 98.5° | 109.4° |
CD1 | CG | CD2 | 118.7° | 120.0° |
CG | CD1 | CE1 | 120.8° | 120.0° |
CG | CD1 | HD1 | 119.6° | 120.0° |
CG | CD2 | CE2 | 120.9° | 120.0° |
CG | CD2 | HD2 | 119.6° | 120.0° |
CE1 | CD1 | HD1 | 119.6° | 120.0° |
CD1 | CE1 | CZ | 119.9° | 120.0° |
CD1 | CE1 | HE1 | 120.1° | 120.0° |
CE2 | CD2 | HD2 | 119.5° | 120.0° |
CD2 | CE2 | CZ | 119.8° | 120.0° |
CD2 | CE2 | HE2 | 120.1° | 120.0° |
CZ | CE1 | HE1 | 120.1° | 120.0° |
CE1 | CZ | CE2 | 119.8° | 120.0° |
CE1 | CZ | HZ | 120.1° | 120.0° |
CZ | CE2 | HE2 | 120.1° | 120.0° |
CE2 | CZ | HZ | 120.1° | 120.0° |
C13 | N17 | O18 | 111.5° | 120.0° |
N17 | O18 | S19 | 110.2° | 106.8° |
O18 | S19 | O20 | 104.8° | 105.8° |
O18 | S19 | O21 | 104.7° | 105.7° |
O18 | S19 | O22 | 105.0° | 107.4° |
O20 | S19 | O21 | 113.7° | 125.4° |
O20 | S19 | O22 | 113.8° | 105.8° |
O21 | S19 | O22 | 113.6° | 105.8° |
S19 | O22 | H22 | 105.0° | 106.8° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
S1 | C1 | C2 | C7 | 120.7° | 120.0° |
S1 | C1 | C2 | H1 | 119.8° | 120.0° |
S1 | C1 | C7 | H1 | 120.4° | 120.0° |
S1 | C1 | C2 | O2 | 57.5° | 60.0° |
S1 | C1 | C2 | C3 | 177.5° | 180.0° |
S1 | C1 | C2 | H2 | 62.4° | 60.0° |
S1 | C1 | C7 | C5 | 173.8° | 180.0° |
S1 | C1 | C7 | H7C1 | 48.5° | 60.0° |
S1 | C1 | C7 | H7C2 | 61.0° | 60.0° |
C1 | S1 | C13 | CB | 4.3° | 109.3° |
C1 | S1 | C13 | N17 | 175.6° | 70.7° |
C2 | C1 | C7 | H1 | 119.4° | 120.0° |
C2 | C1 | S1 | C13 | 107.7° | 72.0° |
C1 | C2 | O2 | C3 | 120.4° | 120.0° |
C1 | C2 | O2 | H2 | 119.9° | 120.0° |
C1 | C2 | C3 | H2 | 120.1° | 120.0° |
C1 | C2 | O2 | HA | 180.0° | 180.0° |
C1 | C2 | C3 | O3 | 175.0° | 180.0° |
C1 | C2 | C3 | C4 | 54.3° | 60.0° |
C1 | C2 | C3 | H3 | 65.8° | 60.0° |
C2 | C1 | C7 | C5 | 66.0° | 60.0° |
C2 | C1 | C7 | H7C1 | 168.7° | 180.0° |
C2 | C1 | C7 | H7C2 | 59.2° | 60.0° |
C7 | C1 | S1 | C13 | 132.5° | 168.0° |
C7 | C1 | C2 | O2 | 178.2° | 180.0° |
C7 | C1 | C2 | C3 | 61.8° | 60.0° |
C7 | C1 | C2 | H2 | 58.3° | 60.0° |
C1 | C7 | C5 | C4 | 62.7° | 60.0° |
C1 | C7 | C5 | H7C1 | 125.3° | 120.0° |
C1 | C7 | C5 | H7C2 | 125.3° | 120.0° |
C1 | C7 | C5 | C6 | 174.1° | 180.0° |
C1 | C7 | C5 | H5 | 56.0° | 60.0° |
C1 | C7 | H7C1 | H7C2 | 118.6° | 120.1° |
H1 | C1 | S1 | C13 | 12.1° | 48.0° |
H1 | C1 | C2 | O2 | 62.4° | 60.0° |
H1 | C1 | C2 | C3 | 57.6° | 60.0° |
H1 | C1 | C2 | H2 | 177.7° | 180.0° |
H1 | C1 | C7 | C5 | 53.4° | 60.0° |
H1 | C1 | C7 | H7C1 | 71.9° | 59.9° |
H1 | C1 | C7 | H7C2 | 178.7° | 180.0° |
S1 | C13 | CB | CG | 65.2° | 180.0° |
S1 | C13 | CB | N17 | 179.9° | 179.9° |
S1 | C13 | CB | HBC1 | 60.1° | 60.0° |
S1 | C13 | CB | HBC2 | 169.5° | 60.1° |
S1 | C13 | N17 | O18 | 0.0° | 5.3° |
O2 | C2 | C3 | H2 | 119.8° | 120.0° |
O2 | C2 | C3 | O3 | 64.9° | 60.0° |
O2 | C2 | C3 | C4 | 174.4° | 180.0° |
O2 | C2 | C3 | H3 | 54.3° | 60.0° |
C3 | C2 | O2 | HA | 59.6° | 60.0° |
C2 | C3 | O3 | C4 | 121.8° | 120.0° |
C2 | C3 | O3 | H3 | 119.1° | 120.1° |
C2 | C3 | C4 | H3 | 120.0° | 120.0° |
C2 | C3 | O3 | HB | 180.0° | 60.0° |
C2 | C3 | C4 | O4 | 171.9° | 180.0° |
C2 | C3 | C4 | C5 | 51.5° | 59.9° |
C2 | C3 | C4 | H4 | 69.2° | 60.0° |
H2 | C2 | O2 | HA | 60.1° | 60.0° |
H2 | C2 | C3 | O3 | 54.9° | 60.0° |
H2 | C2 | C3 | C4 | 65.9° | 60.0° |
H2 | C2 | C3 | H3 | 174.1° | 180.0° |
O3 | C3 | C4 | H3 | 119.1° | 119.9° |
O3 | C3 | C4 | O4 | 67.1° | 60.0° |
O3 | C3 | C4 | C5 | 172.5° | 180.0° |
O3 | C3 | C4 | H4 | 51.7° | 60.0° |
C4 | C3 | O3 | HB | 58.2° | 180.0° |
C3 | C4 | O4 | C5 | 121.9° | 120.0° |
C3 | C4 | O4 | H4 | 118.9° | 120.0° |
C3 | C4 | C5 | H4 | 120.7° | 120.0° |
C3 | C4 | O4 | HC | 180.0° | 60.0° |
C3 | C4 | C5 | C7 | 55.7° | 59.9° |
C3 | C4 | C5 | C6 | 176.7° | 180.0° |
C3 | C4 | C5 | H5 | 63.0° | 60.0° |
H3 | C3 | O3 | HB | 60.9° | 60.0° |
H3 | C3 | C4 | O4 | 51.9° | 59.9° |
H3 | C3 | C4 | C5 | 68.5° | 60.1° |
H3 | C3 | C4 | H4 | 170.8° | 180.0° |
O4 | C4 | C5 | H4 | 119.2° | 120.0° |
O4 | C4 | C5 | C7 | 175.8° | 180.0° |
O4 | C4 | C5 | C6 | 63.2° | 60.0° |
O4 | C4 | C5 | H5 | 57.1° | 60.0° |
C5 | C4 | O4 | HC | 58.2° | 180.0° |
C4 | C5 | C7 | C6 | 123.2° | 120.0° |
C4 | C5 | C7 | H5 | 118.7° | 119.9° |
C4 | C5 | C6 | H5 | 120.3° | 119.9° |
C4 | C5 | C7 | H7C1 | 172.0° | 180.0° |
C4 | C5 | C7 | H7C2 | 62.6° | 60.0° |
C4 | C5 | C6 | O6 | 43.9° | 175.0° |
C4 | C5 | C6 | H6C1 | 81.3° | 65.0° |
C4 | C5 | C6 | H6C2 | 169.2° | 55.0° |
H4 | C4 | O4 | HC | 61.1° | 60.0° |
H4 | C4 | C5 | C7 | 65.0° | 60.0° |
H4 | C4 | C5 | C6 | 56.0° | 60.0° |
H4 | C4 | C5 | H5 | 176.3° | NaN° |
C7 | C5 | C6 | H5 | 118.1° | 120.0° |
C5 | C7 | H7C1 | H7C2 | 118.6° | 120.0° |
C7 | C5 | C6 | O6 | 77.6° | 65.0° |
C7 | C5 | C6 | H6C1 | 157.2° | 55.0° |
C7 | C5 | C6 | H6C2 | 47.7° | 175.0° |
C6 | C5 | C7 | H7C1 | 48.9° | 60.0° |
C6 | C5 | C7 | H7C2 | 60.6° | 60.0° |
C5 | C6 | O6 | H6C1 | 125.3° | 120.0° |
C5 | C6 | O6 | H6C2 | 125.2° | 120.0° |
C5 | C6 | H6C1 | H6C2 | 117.4° | 120.0° |
C5 | C6 | O6 | H6 | 180.0° | 180.0° |
H5 | C5 | C7 | H7C1 | 69.3° | 60.0° |
H5 | C5 | C7 | H7C2 | 178.7° | 180.0° |
H5 | C5 | C6 | O6 | 164.3° | 55.1° |
H5 | C5 | C6 | H6C1 | 39.0° | 175.1° |
H5 | C5 | C6 | H6C2 | 70.4° | 65.0° |
O6 | C6 | H6C1 | H6C2 | 117.5° | 120.0° |
H6C1 | C6 | O6 | H6 | 54.7° | 60.1° |
H6C2 | C6 | O6 | H6 | 54.8° | 60.0° |
CG | CB | C13 | HBC1 | 125.3° | 120.0° |
CG | CB | C13 | HBC2 | 125.2° | 120.0° |
CG | CB | HBC1 | HBC2 | 117.8° | 119.9° |
CB | CG | CD1 | CD2 | 179.7° | 179.8° |
CB | CG | CD1 | CE1 | 179.7° | 179.9° |
CB | CG | CD1 | HD1 | 0.3° | 0.0° |
CB | CG | CD2 | CE2 | 179.6° | 179.8° |
CB | CG | CD2 | HD2 | 0.3° | 0.2° |
CG | CB | C13 | N17 | 114.9° | 0.1° |
C13 | CB | HBC1 | HBC2 | 117.8° | 120.0° |
C13 | CB | CG | CD1 | 134.1° | 90.0° |
C13 | CB | CG | CD2 | 46.1° | 90.2° |
CB | C13 | N17 | O18 | 179.9° | 174.6° |
HBC1 | CB | CG | CD1 | 8.8° | 30.1° |
HBC1 | CB | CG | CD2 | 171.4° | 149.7° |
HBC1 | CB | C13 | N17 | 119.8° | 120.0° |
HBC2 | CB | CG | CD1 | 100.6° | 150.0° |
HBC2 | CB | CG | CD2 | 79.1° | 29.8° |
HBC2 | CB | C13 | N17 | 10.4° | 120.0° |
CG | CD1 | CE1 | HD1 | 180.0° | 179.9° |
CD1 | CG | CD2 | CE2 | 0.1° | 0.4° |
CD1 | CG | CD2 | HD2 | 179.9° | 180.0° |
CG | CD1 | CE1 | CZ | 0.1° | 0.1° |
CG | CD1 | CE1 | HE1 | 179.9° | 180.0° |
CD2 | CG | CD1 | CE1 | 0.1° | 0.3° |
CD2 | CG | CD1 | HD1 | 179.9° | 179.8° |
CG | CD2 | CE2 | HD2 | 180.0° | 179.6° |
CG | CD2 | CE2 | CZ | 0.1° | 0.4° |
CG | CD2 | CE2 | HE2 | 179.9° | 179.7° |
CD1 | CE1 | CZ | HE1 | 180.0° | 179.9° |
CD1 | CE1 | CZ | CE2 | 0.0° | 0.0° |
CD1 | CE1 | CZ | HZ | 180.0° | 180.0° |
HD1 | CD1 | CE1 | CZ | 179.9° | 180.0° |
HD1 | CD1 | CE1 | HE1 | 0.1° | 0.0° |
CD2 | CE2 | CZ | CE1 | 0.0° | 0.2° |
CD2 | CE2 | CZ | HE2 | 180.0° | 179.9° |
CD2 | CE2 | CZ | HZ | 180.0° | 179.9° |
HD2 | CD2 | CE2 | CZ | 179.9° | 180.0° |
HD2 | CD2 | CE2 | HE2 | 0.1° | 0.1° |
CE1 | CZ | CE2 | HZ | 180.0° | 179.9° |
CE1 | CZ | CE2 | HE2 | 179.9° | 179.9° |
HE1 | CE1 | CZ | CE2 | 179.9° | 180.0° |
HE1 | CE1 | CZ | HZ | 0.0° | 0.1° |
HE2 | CE2 | CZ | HZ | 0.0° | 0.0° |
C13 | N17 | O18 | S19 | 147.9° | 175.1° |
N17 | O18 | S19 | O20 | 73.7° | 39.4° |
N17 | O18 | S19 | O21 | 166.3° | 174.2° |
N17 | O18 | S19 | O22 | 46.4° | 73.2° |
O18 | S19 | O20 | O21 | 113.7° | 123.1° |
O18 | S19 | O20 | O22 | 114.1° | 113.7° |
O18 | S19 | O21 | O22 | 114.0° | 113.7° |
O18 | S19 | O22 | H22 | 180.0° | 180.0° |
O20 | S19 | O21 | O22 | 132.3° | 123.2° |
O20 | S19 | O22 | H22 | 66.1° | 67.4° |
O21 | S19 | O22 | H22 | 66.2° | 67.4° |