CG1
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| P | OP3 | sing | 1.61Å | 1.60Å | |
| OP3 | C | sing | 1.43Å | 1.43Å | |
| O5' | P | sing | 1.61Å | 1.60Å | |
| OP2 | P | doub | 1.48Å | 1.48Å | |
| P | OP1 | sing | 1.61Å | 1.48Å | |
| OP1 | HOP1 | sing | 0.97Å | 0.95Å | |
| C5' | O5' | sing | 1.43Å | 1.43Å | |
| C4' | C5' | sing | 1.53Å | 1.51Å | |
| H5'A | C5' | sing | 1.09Å | 1.10Å | |
| C5' | H5' | sing | 1.09Å | 1.10Å | |
| C3' | C4' | sing | 1.54Å | 1.53Å | |
| H4' | C4' | sing | 1.09Å | 1.10Å | |
| C4' | O4' | sing | 1.44Å | 1.15Å | |
| C1' | O4' | sing | 1.44Å | 1.41Å | |
| O3' | C3' | sing | 1.43Å | 1.43Å | |
| C2' | C3' | sing | 1.55Å | 1.50Å | |
| C3' | H3' | sing | 1.09Å | 1.10Å | |
| O3' | HO3' | sing | 0.97Å | 0.95Å | |
| O2' | C2' | sing | 1.43Å | 1.41Å | |
| H2' | C2' | sing | 1.09Å | 1.10Å | |
| C2' | C1' | sing | 1.55Å | 1.53Å | |
| O2' | HO2' | sing | 0.97Å | 0.95Å | |
| C1' | N9 | sing | 1.46Å | 1.48Å | |
| C1' | H1' | sing | 1.09Å | 1.10Å | |
| C4 | N9 | sing | 1.37Å | 1.37Å | Aromatic |
| N9 | C8 | sing | 1.36Å | 1.35Å | Aromatic |
| C8 | N7 | doub | 1.30Å | 1.33Å | Aromatic |
| C8 | H8 | sing | 1.08Å | 1.08Å | |
| C5 | N7 | sing | 1.36Å | 1.37Å | Aromatic |
| C4 | C5 | doub | 1.40Å | 1.36Å | Aromatic |
| C5 | C6 | sing | 1.41Å | 1.41Å | |
| N1 | C6 | sing | 1.35Å | 1.36Å | |
| C6 | O6 | doub | 1.22Å | 1.23Å | |
| C2 | N1 | sing | 1.36Å | 1.35Å | |
| N1 | HN1 | sing | 0.97Å | 1.00Å | |
| N2 | C2 | sing | 1.37Å | 1.33Å | |
| N3 | C2 | doub | 1.31Å | 1.35Å | |
| N2 | HN2 | sing | 0.97Å | 1.00Å | |
| N2 | HN2A | sing | 0.97Å | 1.00Å | |
| N3 | C4 | sing | 1.34Å | 1.36Å | |
| C | H | sing | 1.09Å | 1.10Å | |
| C | HA | sing | 1.09Å | 1.10Å | |
| C | HB | sing | 1.09Å | 1.10Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| P | OP3 | C | 120.0° | 123.0° |
| OP3 | P | O5' | 103.0° | 109.5° |
| OP3 | P | OP2 | 109.6° | 109.5° |
| OP3 | P | OP1 | 109.7° | 109.5° |
| OP3 | C | H | 109.5° | 109.5° |
| OP3 | C | HA | 109.4° | 109.5° |
| OP3 | C | HB | 109.5° | 109.4° |
| O5' | P | OP2 | 108.0° | 109.5° |
| O5' | P | OP1 | 108.0° | 109.5° |
| P | O5' | C5' | 120.0° | 123.0° |
| OP2 | P | OP1 | 117.5° | 109.5° |
| P | OP1 | HOP1 | 109.5° | 114.0° |
| O5' | C5' | C4' | 110.1° | 109.5° |
| O5' | C5' | H5'A | 109.3° | 109.5° |
| O5' | C5' | H5' | 109.1° | 109.4° |
| C4' | C5' | H5'A | 109.2° | 109.5° |
| C4' | C5' | H5' | 109.2° | 109.4° |
| C5' | C4' | C3' | 114.4° | 109.9° |
| C5' | C4' | H4' | 100.7° | 109.8° |
| C5' | C4' | O4' | 114.4° | 109.9° |
| H5'A | C5' | H5' | 109.9° | 109.4° |
| C3' | C4' | H4' | 112.2° | 110.0° |
| C3' | C4' | O4' | 103.4° | 107.3° |
| C4' | C3' | O3' | 109.4° | 110.5° |
| C4' | C3' | C2' | 105.3° | 104.2° |
| C4' | C3' | H3' | 112.9° | 110.5° |
| H4' | C4' | O4' | 112.2° | 109.9° |
| C4' | O4' | C1' | 120.3° | 107.0° |
| O4' | C1' | C2' | 102.5° | 103.5° |
| O4' | C1' | N9 | 111.2° | 110.7° |
| O4' | C1' | H1' | 114.4° | 110.7° |
| O3' | C3' | C2' | 111.5° | 110.6° |
| O3' | C3' | H3' | 106.9° | 110.4° |
| C3' | O3' | HO3' | 109.5° | 114.0° |
| C2' | C3' | H3' | 110.9° | 110.5° |
| C3' | C2' | O2' | 102.8° | 110.9° |
| C3' | C2' | H2' | 121.0° | 110.8° |
| C3' | C2' | C1' | 100.7° | 102.1° |
| O2' | C2' | H2' | 107.7° | 110.8° |
| O2' | C2' | C1' | 115.4° | 110.9° |
| C2' | O2' | HO2' | 109.5° | 114.0° |
| H2' | C2' | C1' | 109.5° | 110.9° |
| C2' | C1' | N9 | 113.5° | 110.6° |
| C2' | C1' | H1' | 112.0° | 110.6° |
| N9 | C1' | H1' | 103.6° | 110.7° |
| C1' | N9 | C4 | 126.3° | 126.3° |
| C1' | N9 | C8 | 127.3° | 126.2° |
| C4 | N9 | C8 | 106.4° | 107.5° |
| N9 | C4 | C5 | 106.0° | 106.1° |
| N9 | C4 | N3 | 125.9° | 134.2° |
| N9 | C8 | N7 | 112.6° | 109.8° |
| N9 | C8 | H8 | 123.7° | 125.1° |
| N7 | C8 | H8 | 123.7° | 125.1° |
| C8 | N7 | C5 | 103.9° | 109.3° |
| N7 | C5 | C4 | 111.0° | 107.2° |
| N7 | C5 | C6 | 131.5° | 134.1° |
| C4 | C5 | C6 | 117.5° | 118.6° |
| C5 | C4 | N3 | 128.0° | 119.7° |
| C5 | C6 | N1 | 117.4° | 118.3° |
| C5 | C6 | O6 | 125.4° | 120.8° |
| N1 | C6 | O6 | 117.1° | 120.9° |
| C6 | N1 | C2 | 118.5° | 120.3° |
| C6 | N1 | HN1 | 120.8° | 119.8° |
| C2 | N1 | HN1 | 120.8° | 119.9° |
| N1 | C2 | N2 | 111.2° | 119.1° |
| N1 | C2 | N3 | 129.1° | 121.9° |
| N2 | C2 | N3 | 119.6° | 119.0° |
| C2 | N2 | HN2 | 109.0° | 120.0° |
| C2 | N2 | HN2A | 125.5° | 119.9° |
| C2 | N3 | C4 | 109.5° | 121.1° |
| HN2 | N2 | HN2A | 125.5° | 120.1° |
| H | C | HA | 109.5° | 109.5° |
| H | C | HB | 109.5° | 109.5° |
| HA | C | HB | 109.5° | 109.4° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| OP3 | P | O5' | OP2 | 116.0° | 120.0° |
| OP3 | P | O5' | OP1 | 116.1° | 120.0° |
| OP3 | P | OP2 | OP1 | 126.1° | 120.0° |
| OP3 | P | OP1 | HOP1 | 164.1° | 60.0° |
| OP3 | P | O5' | C5' | 94.1° | 175.0° |
| P | OP3 | C | H | 12.2° | 60.0° |
| P | OP3 | C | HA | 107.8° | 60.0° |
| P | OP3 | C | HB | 132.2° | 180.0° |
| C | OP3 | P | O5' | 163.3° | 175.0° |
| C | OP3 | P | OP2 | 82.0° | 55.0° |
| C | OP3 | P | OP1 | 48.4° | 65.0° |
| OP3 | C | H | HA | 120.0° | 120.1° |
| OP3 | C | H | HB | 120.0° | 120.0° |
| OP3 | C | HA | HB | 120.0° | 120.0° |
| O5' | P | OP2 | OP1 | 122.3° | 120.0° |
| O5' | P | OP1 | HOP1 | 52.5° | 60.0° |
| P | O5' | C5' | C4' | 159.0° | 180.0° |
| P | O5' | C5' | H5'A | 81.0° | 59.9° |
| P | O5' | C5' | H5' | 39.2° | 60.0° |
| OP2 | P | OP1 | HOP1 | 69.9° | 180.0° |
| OP2 | P | O5' | C5' | 149.9° | 55.0° |
| OP1 | P | O5' | C5' | 22.0° | 65.0° |
| O5' | C5' | C4' | H5'A | 120.0° | 120.1° |
| O5' | C5' | C4' | H5' | 119.7° | 120.0° |
| O5' | C5' | H5'A | H5' | 119.7° | 120.0° |
| O5' | C5' | C4' | C3' | 47.2° | 175.7° |
| O5' | C5' | C4' | H4' | 167.7° | 54.6° |
| O5' | C5' | C4' | O4' | 71.8° | 66.4° |
| C4' | C5' | H5'A | H5' | 119.8° | 119.9° |
| C5' | C4' | C3' | H4' | 113.9° | 121.1° |
| C5' | C4' | C3' | O4' | 125.0° | 119.4° |
| C5' | C4' | H4' | O4' | 122.0° | 121.0° |
| C5' | C4' | O4' | C1' | 154.1° | 146.0° |
| C5' | C4' | C3' | O3' | 88.3° | 119.7° |
| C5' | C4' | C3' | C2' | 151.7° | 121.5° |
| C5' | C4' | C3' | H3' | 30.6° | 2.8° |
| H5'A | C5' | C4' | C3' | 72.8° | 55.6° |
| H5'A | C5' | C4' | H4' | 47.7° | 65.5° |
| H5'A | C5' | C4' | O4' | 168.2° | 173.5° |
| H5' | C5' | C4' | C3' | 167.0° | 64.3° |
| H5' | C5' | C4' | H4' | 72.5° | 174.5° |
| H5' | C5' | C4' | O4' | 47.9° | 53.6° |
| C3' | C4' | H4' | O4' | 115.9° | 117.9° |
| C3' | C4' | O4' | C1' | 29.0° | 26.6° |
| C4' | C3' | O3' | C2' | 116.1° | 114.8° |
| C4' | C3' | O3' | H3' | 122.6° | 122.6° |
| C4' | C3' | C2' | H3' | 122.5° | 118.7° |
| C4' | C3' | O3' | HO3' | 140.1° | 180.0° |
| C4' | C3' | C2' | O2' | 104.0° | 139.1° |
| C4' | C3' | C2' | H2' | 136.0° | 97.3° |
| C4' | C3' | C2' | C1' | 15.4° | 20.8° |
| H4' | C4' | O4' | C1' | 92.1° | 93.0° |
| H4' | C4' | C3' | O3' | 25.6° | 1.3° |
| H4' | C4' | C3' | C2' | 94.4° | 117.4° |
| H4' | C4' | C3' | H3' | 144.5° | 123.8° |
| O4' | C4' | C3' | O3' | 146.7° | 120.8° |
| O4' | C4' | C3' | C2' | 26.7° | 2.1° |
| O4' | C4' | C3' | H3' | 94.4° | 116.7° |
| C4' | O4' | C1' | C2' | 19.0° | 40.1° |
| C4' | O4' | C1' | N9 | 140.6° | 158.5° |
| C4' | O4' | C1' | H1' | 102.6° | 78.4° |
| O4' | C1' | C2' | C3' | 1.8° | 37.0° |
| O4' | C1' | C2' | O2' | 108.0° | 155.3° |
| O4' | C1' | C2' | H2' | 130.3° | 81.1° |
| O4' | C1' | C2' | N9 | 120.0° | 118.5° |
| O4' | C1' | C2' | H1' | 123.1° | 118.5° |
| O4' | C1' | N9 | H1' | 123.2° | 123.1° |
| O4' | C1' | N9 | C4 | 150.1° | 161.2° |
| O4' | C1' | N9 | C8 | 30.1° | 19.0° |
| O3' | C3' | C2' | H3' | 119.0° | 122.6° |
| O3' | C3' | C2' | O2' | 14.6° | 20.4° |
| O3' | C3' | C2' | H2' | 105.4° | 144.0° |
| O3' | C3' | C2' | C1' | 134.0° | 97.9° |
| C2' | C3' | O3' | HO3' | 24.0° | 65.2° |
| C3' | C2' | O2' | H2' | 128.8° | 123.6° |
| C3' | C2' | O2' | C1' | 108.6° | 112.7° |
| C3' | C2' | H2' | C1' | 116.3° | 112.7° |
| C3' | C2' | O2' | HO2' | 83.8° | 61.3° |
| C3' | C2' | C1' | N9 | 118.2° | 155.5° |
| C3' | C2' | C1' | H1' | 124.9° | 81.5° |
| H3' | C3' | O3' | HO3' | 97.3° | 57.5° |
| H3' | C3' | C2' | O2' | 133.6° | 102.2° |
| H3' | C3' | C2' | H2' | 13.6° | 21.4° |
| H3' | C3' | C2' | C1' | 107.1° | 139.6° |
| O2' | C2' | H2' | C1' | 126.2° | 123.7° |
| O2' | C2' | C1' | N9 | 132.0° | 86.2° |
| O2' | C2' | C1' | H1' | 15.1° | 36.7° |
| H2' | C2' | O2' | HO2' | 45.0° | 62.3° |
| H2' | C2' | C1' | N9 | 10.3° | 37.4° |
| H2' | C2' | C1' | H1' | 106.6° | 160.3° |
| C1' | C2' | O2' | HO2' | 167.6° | 174.1° |
| C2' | C1' | N9 | H1' | 121.8° | 122.9° |
| C2' | C1' | N9 | C4 | 94.9° | 84.7° |
| C2' | C1' | N9 | C8 | 84.9° | 95.0° |
| C1' | N9 | C4 | C8 | 179.9° | 179.8° |
| C1' | N9 | C8 | N7 | 179.9° | 180.0° |
| C1' | N9 | C8 | H8 | 0.0° | 0.0° |
| C1' | N9 | C4 | C5 | 179.9° | 179.8° |
| C1' | N9 | C4 | N3 | 0.0° | 0.6° |
| H1' | C1' | N9 | C4 | 26.8° | 38.2° |
| H1' | C1' | N9 | C8 | 153.3° | 142.1° |
| C4 | N9 | C8 | N7 | 0.1° | 0.2° |
| C4 | N9 | C8 | H8 | 179.9° | 179.8° |
| N9 | C4 | C5 | N7 | 0.0° | 0.4° |
| N9 | C4 | C5 | N3 | 179.9° | 179.3° |
| N9 | C4 | C5 | C6 | 180.0° | 179.9° |
| N9 | C4 | N3 | C2 | 180.0° | 179.7° |
| N9 | C8 | N7 | H8 | 180.0° | 180.0° |
| N9 | C8 | N7 | C5 | 0.1° | 0.0° |
| C8 | N9 | C4 | C5 | 0.0° | 0.4° |
| C8 | N9 | C4 | N3 | 179.9° | 179.6° |
| C8 | N7 | C5 | C4 | 0.1° | 0.2° |
| C8 | N7 | C5 | C6 | 180.0° | 179.9° |
| H8 | C8 | N7 | C5 | 179.9° | 180.0° |
| N7 | C5 | C4 | C6 | 180.0° | 179.7° |
| N7 | C5 | C6 | N1 | 180.0° | 180.0° |
| N7 | C5 | C6 | O6 | 0.0° | 0.1° |
| N7 | C5 | C4 | N3 | 180.0° | 179.7° |
| C4 | C5 | C6 | N1 | 0.0° | 0.3° |
| C4 | C5 | C6 | O6 | 180.0° | 179.8° |
| C5 | C4 | N3 | C2 | 0.1° | 0.6° |
| C5 | C6 | N1 | O6 | 180.0° | 179.9° |
| C5 | C6 | N1 | C2 | 0.1° | 0.1° |
| C5 | C6 | N1 | HN1 | 180.0° | 180.0° |
| C6 | C5 | C4 | N3 | 0.1° | 0.6° |
| C6 | N1 | C2 | HN1 | 180.0° | 180.0° |
| C6 | N1 | C2 | N2 | 180.0° | 180.0° |
| C6 | N1 | C2 | N3 | 0.1° | 0.1° |
| O6 | C6 | N1 | C2 | 180.0° | 180.0° |
| O6 | C6 | N1 | HN1 | 0.0° | 0.0° |
| N1 | C2 | N2 | N3 | 179.9° | 180.0° |
| N1 | C2 | N2 | HN2 | 180.0° | 0.0° |
| N1 | C2 | N2 | HN2A | 0.0° | 180.0° |
| N1 | C2 | N3 | C4 | 0.0° | 0.3° |
| HN1 | N1 | C2 | N2 | 0.0° | 0.0° |
| HN1 | N1 | C2 | N3 | 179.9° | 180.0° |
| C2 | N2 | HN2 | HN2A | 180.0° | 179.9° |
| N2 | C2 | N3 | C4 | 180.0° | 179.7° |
| N3 | C2 | N2 | HN2 | 0.1° | 179.9° |
| N3 | C2 | N2 | HN2A | 179.9° | 0.0° |
| H | C | HA | HB | 120.0° | 120.0° |
