CFY
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
CE1 | CZ1 | doub | 1.38Å | 1.41Å | Aromatic |
CE1 | CD1 | sing | 1.38Å | 1.41Å | Aromatic |
CZ1 | CE2 | sing | 1.38Å | 1.42Å | Aromatic |
CD1 | CG1 | doub | 1.38Å | 1.42Å | Aromatic |
CE2 | CD2 | doub | 1.38Å | 1.42Å | Aromatic |
CG1 | CD2 | sing | 1.38Å | 1.42Å | Aromatic |
CG1 | CB0 | sing | 1.51Å | 1.51Å | |
CB0 | CA0 | sing | 1.53Å | 1.54Å | |
OH | CZ2 | sing | 1.36Å | 1.29Å | |
N0 | CA0 | sing | 1.47Å | 1.50Å | |
CE3 | CZ2 | doub | 1.39Å | 1.43Å | Aromatic |
CE3 | CD3 | sing | 1.38Å | 1.45Å | Aromatic |
CZ2 | CE4 | sing | 1.39Å | 1.47Å | Aromatic |
SG | CB1 | sing | 1.84Å | 1.67Å | |
SG | C0 | sing | 1.84Å | 1.81Å | |
CA0 | C0 | sing | 1.53Å | 1.68Å | |
CB1 | CA1 | sing | 1.52Å | 1.62Å | |
CD3 | CG2 | doub | 1.38Å | 1.50Å | Aromatic |
CE4 | CD4 | doub | 1.38Å | 1.48Å | Aromatic |
C0 | N1 | sing | 1.47Å | 1.36Å | |
C0 | O0 | sing | 1.43Å | 1.45Å | |
CG2 | CD4 | sing | 1.38Å | 1.45Å | Aromatic |
CG2 | CB2 | sing | 1.51Å | 1.43Å | |
CA1 | N1 | doub | 1.26Å | 1.43Å | |
CA1 | C1 | sing | 1.51Å | 1.21Å | |
N2 | C1 | doub | 1.47Å | 1.32Å | |
N2 | CA2 | sing | 1.28Å | 1.38Å | |
C1 | N3 | sing | 1.47Å | 1.39Å | |
CB2 | CA2 | doub | 1.51Å | 1.42Å | |
CA2 | C2 | sing | 1.48Å | 1.42Å | |
N3 | C2 | sing | 1.35Å | 1.40Å | |
N3 | CA3 | sing | 1.47Å | 1.44Å | |
C2 | O2 | doub | 1.22Å | 1.28Å | |
CA3 | C3 | sing | 1.51Å | 1.50Å | |
C3 | O3 | doub | 1.21Å | 1.24Å | |
C3 | OXT | sing | 1.34Å | 1.33Å | |
N0 | H | sing | 1.01Å | 1.00Å | |
N0 | H2 | sing | 1.01Å | 1.00Å | |
CA0 | HA0 | sing | 1.09Å | 1.10Å | |
O0 | HO1 | sing | 0.97Å | 0.95Å | |
CB0 | HB01 | sing | 1.09Å | 1.10Å | |
CB0 | HB02 | sing | 1.09Å | 1.10Å | |
CD1 | HD1 | sing | 1.08Å | 1.08Å | |
CE1 | HE1 | sing | 1.08Å | 1.08Å | |
CZ1 | HZ1 | sing | 1.08Å | 1.08Å | |
CE2 | HE2 | sing | 1.08Å | 1.08Å | |
CD2 | HD2 | sing | 1.08Å | 1.08Å | |
CB1 | HB11 | sing | 1.09Å | 1.10Å | |
CB1 | HB12 | sing | 1.09Å | 1.10Å | |
CB2 | HB21 | sing | 1.09Å | 1.10Å | |
CD3 | HD3 | sing | 1.08Å | 1.08Å | |
CD4 | HD4 | sing | 1.08Å | 1.08Å | |
CE3 | HE3 | sing | 1.08Å | 1.08Å | |
CE4 | HE4 | sing | 1.08Å | 1.08Å | |
OH | HOH | sing | 0.97Å | 0.95Å | |
CA3 | HA31 | sing | 1.09Å | 1.10Å | |
CA3 | HA32 | sing | 1.09Å | 1.10Å | |
OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CZ1 | CE1 | CD1 | 123.2° | 120.0° |
CE1 | CZ1 | CE2 | 118.4° | 120.0° |
CZ1 | CE1 | HE1 | 118.4° | 120.0° |
CE1 | CZ1 | HZ1 | 120.8° | 120.0° |
CE1 | CD1 | CG1 | 116.6° | 120.0° |
CE1 | CD1 | HD1 | 121.7° | 120.0° |
CD1 | CE1 | HE1 | 118.4° | 120.0° |
CZ1 | CE2 | CD2 | 121.0° | 120.0° |
CE2 | CZ1 | HZ1 | 120.8° | 120.0° |
CZ1 | CE2 | HE2 | 119.5° | 120.0° |
CD1 | CG1 | CD2 | 122.4° | 120.0° |
CD1 | CG1 | CB0 | 114.3° | 120.0° |
CG1 | CD1 | HD1 | 121.7° | 120.0° |
CE2 | CD2 | CG1 | 118.4° | 120.0° |
CD2 | CE2 | HE2 | 119.5° | 120.0° |
CE2 | CD2 | HD2 | 120.8° | 120.0° |
CD2 | CG1 | CB0 | 123.3° | 120.0° |
CG1 | CD2 | HD2 | 120.8° | 120.0° |
CG1 | CB0 | CA0 | 111.1° | 109.4° |
CG1 | CB0 | HB01 | 108.9° | 109.4° |
CG1 | CB0 | HB02 | 108.9° | 109.5° |
CB0 | CA0 | N0 | 109.6° | 109.5° |
CB0 | CA0 | C0 | 113.7° | 109.5° |
CB0 | CA0 | HA0 | 107.3° | 109.5° |
CA0 | CB0 | HB01 | 108.9° | 109.5° |
CA0 | CB0 | HB02 | 108.9° | 109.5° |
OH | CZ2 | CE3 | 121.0° | 120.0° |
OH | CZ2 | CE4 | 118.0° | 120.1° |
CZ2 | OH | HOH | 109.5° | 114.0° |
N0 | CA0 | C0 | 111.9° | 109.5° |
CA0 | N0 | H | 109.5° | 111.0° |
CA0 | N0 | H2 | 109.5° | 111.0° |
N0 | CA0 | HA0 | 109.3° | 109.5° |
CZ2 | CE3 | CD3 | 120.7° | 119.9° |
CE3 | CZ2 | CE4 | 120.9° | 119.9° |
CZ2 | CE3 | HE3 | 119.7° | 120.0° |
CE3 | CD3 | CG2 | 119.9° | 120.1° |
CE3 | CD3 | HD3 | 120.0° | 120.0° |
CD3 | CE3 | HE3 | 119.6° | 120.0° |
CZ2 | CE4 | CD4 | 118.7° | 119.9° |
CZ2 | CE4 | HE4 | 120.7° | 120.0° |
CB1 | SG | C0 | 89.0° | 93.5° |
SG | CB1 | CA1 | 118.4° | 101.6° |
SG | CB1 | HB11 | 106.6° | 111.0° |
SG | CB1 | HB12 | 106.6° | 111.0° |
SG | C0 | CA0 | 111.8° | 110.8° |
SG | C0 | N1 | 111.2° | 102.5° |
SG | C0 | O0 | 117.5° | 111.0° |
CA0 | C0 | N1 | 105.3° | 110.8° |
CA0 | C0 | O0 | 97.3° | 110.7° |
C0 | CA0 | HA0 | 104.8° | 109.5° |
CB1 | CA1 | N1 | 98.5° | 117.5° |
CB1 | CA1 | C1 | 127.8° | 121.3° |
CA1 | CB1 | HB11 | 106.6° | 110.9° |
CA1 | CB1 | HB12 | 106.6° | 111.0° |
CD3 | CG2 | CD4 | 118.8° | 120.1° |
CD3 | CG2 | CB2 | 125.1° | 120.0° |
CG2 | CD3 | HD3 | 120.0° | 120.0° |
CE4 | CD4 | CG2 | 121.0° | 120.1° |
CE4 | CD4 | HD4 | 119.5° | 119.9° |
CD4 | CE4 | HE4 | 120.7° | 120.1° |
N1 | C0 | O0 | 112.3° | 110.8° |
C0 | N1 | CA1 | 121.9° | 119.2° |
C0 | O0 | HO1 | 109.5° | 114.0° |
CD4 | CG2 | CB2 | 116.1° | 119.9° |
CG2 | CD4 | HD4 | 119.5° | 120.0° |
CG2 | CB2 | CA2 | 131.6° | 109.5° |
CG2 | CB2 | HB21 | 102.7° | 109.5° |
N1 | CA1 | C1 | 133.6° | 121.2° |
CA1 | C1 | N2 | 127.0° | 110.1° |
CA1 | C1 | N3 | 123.8° | 110.1° |
C1 | N2 | CA2 | 108.1° | 108.6° |
N2 | C1 | N3 | 109.2° | 106.4° |
N2 | CA2 | CB2 | 125.4° | 124.9° |
N2 | CA2 | C2 | 110.4° | 110.2° |
C1 | N3 | C2 | 109.5° | 106.3° |
C1 | N3 | CA3 | 131.8° | 126.9° |
CB2 | CA2 | C2 | 124.2° | 124.9° |
CA2 | CB2 | HB21 | 102.6° | 109.5° |
CA2 | C2 | N3 | 102.7° | 108.5° |
CA2 | C2 | O2 | 128.2° | 125.7° |
C2 | N3 | CA3 | 117.0° | 126.9° |
N3 | C2 | O2 | 129.1° | 125.8° |
N3 | CA3 | C3 | 121.6° | 109.5° |
N3 | CA3 | HA31 | 105.6° | 109.5° |
N3 | CA3 | HA32 | 105.6° | 109.5° |
CA3 | C3 | O3 | 122.2° | 120.0° |
CA3 | C3 | OXT | 115.9° | 120.0° |
C3 | CA3 | HA31 | 105.6° | 109.5° |
C3 | CA3 | HA32 | 105.6° | 109.5° |
O3 | C3 | OXT | 121.9° | 120.0° |
C3 | OXT | HXT | 109.5° | 117.0° |
H | N0 | H2 | 109.5° | 111.0° |
HB01 | CB0 | HB02 | 110.0° | 109.5° |
HB11 | CB1 | HB12 | 112.2° | 110.9° |
HA31 | CA3 | HA32 | 113.1° | 109.4° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
CZ1 | CE1 | CD1 | HE1 | 180.0° | 180.0° |
CE1 | CZ1 | CE2 | HZ1 | 180.0° | 180.0° |
CZ1 | CE1 | CD1 | CG1 | 0.1° | 0.0° |
CE1 | CZ1 | CE2 | CD2 | 0.1° | 0.1° |
CZ1 | CE1 | CD1 | HD1 | 179.9° | 180.0° |
CE1 | CZ1 | CE2 | HE2 | 179.9° | 180.0° |
CD1 | CE1 | CZ1 | CE2 | 0.1° | 0.0° |
CE1 | CD1 | CG1 | HD1 | 180.0° | 180.0° |
CE1 | CD1 | CG1 | CD2 | 0.0° | 0.0° |
CE1 | CD1 | CG1 | CB0 | 180.0° | 179.8° |
CD1 | CE1 | CZ1 | HZ1 | 179.9° | 180.0° |
CZ1 | CE2 | CD2 | HE2 | 180.0° | 179.9° |
CZ1 | CE2 | CD2 | CG1 | 0.0° | 0.1° |
CE2 | CZ1 | CE1 | HE1 | 179.9° | 180.0° |
CZ1 | CE2 | CD2 | HD2 | 180.0° | 179.8° |
CD1 | CG1 | CD2 | CE2 | 0.1° | 0.1° |
CD1 | CG1 | CD2 | CB0 | 180.0° | 179.8° |
CD1 | CG1 | CB0 | CA0 | 109.6° | 89.8° |
CD1 | CG1 | CB0 | HB01 | 130.4° | 150.3° |
CD1 | CG1 | CB0 | HB02 | 10.4° | 30.3° |
CG1 | CD1 | CE1 | HE1 | 179.9° | 180.0° |
CD1 | CG1 | CD2 | HD2 | 179.9° | 179.7° |
CE2 | CD2 | CG1 | HD2 | 180.0° | 179.7° |
CE2 | CD2 | CG1 | CB0 | 180.0° | 179.7° |
CD2 | CE2 | CZ1 | HZ1 | 179.9° | 179.9° |
CD2 | CG1 | CB0 | CA0 | 70.3° | 90.0° |
CD2 | CG1 | CB0 | HB01 | 49.7° | 29.9° |
CD2 | CG1 | CB0 | HB02 | 169.7° | 150.0° |
CD2 | CG1 | CD1 | HD1 | 180.0° | 180.0° |
CG1 | CD2 | CE2 | HE2 | 180.0° | 180.0° |
CG1 | CB0 | CA0 | HB01 | 120.0° | 119.9° |
CG1 | CB0 | CA0 | HB02 | 120.0° | 120.0° |
CG1 | CB0 | CA0 | N0 | 48.3° | 65.0° |
CG1 | CB0 | CA0 | C0 | 174.4° | 175.0° |
CG1 | CB0 | CA0 | HA0 | 70.3° | 55.0° |
CG1 | CB0 | HB01 | HB02 | 119.3° | 120.0° |
CB0 | CG1 | CD1 | HD1 | 0.0° | 0.2° |
CB0 | CG1 | CD2 | HD2 | 0.0° | 0.0° |
CB0 | CA0 | N0 | C0 | 127.1° | 120.0° |
CB0 | CA0 | N0 | HA0 | 117.3° | 120.0° |
CB0 | CA0 | C0 | SG | 46.9° | 66.9° |
CB0 | CA0 | C0 | HA0 | 116.9° | 120.0° |
CB0 | CA0 | C0 | N1 | 167.7° | 180.0° |
CB0 | CA0 | C0 | O0 | 76.7° | 56.7° |
CB0 | CA0 | N0 | H | 180.0° | 176.0° |
CB0 | CA0 | N0 | H2 | 60.0° | 60.0° |
CA0 | CB0 | HB01 | HB02 | 119.3° | 120.1° |
OH | CZ2 | CE3 | CE4 | 179.8° | 179.7° |
OH | CZ2 | CE3 | CD3 | 179.6° | 180.0° |
OH | CZ2 | CE4 | CD4 | 179.6° | 179.7° |
OH | CZ2 | CE3 | HE3 | 0.4° | 0.2° |
OH | CZ2 | CE4 | HE4 | 0.3° | 0.3° |
N0 | CA0 | C0 | SG | 77.9° | 53.1° |
N0 | CA0 | C0 | HA0 | 118.3° | 120.0° |
N0 | CA0 | C0 | N1 | 42.9° | 60.0° |
N0 | CA0 | C0 | O0 | 158.5° | 176.7° |
CA0 | N0 | H | H2 | 120.0° | 124.0° |
N0 | CA0 | CB0 | HB01 | 168.3° | 54.9° |
N0 | CA0 | CB0 | HB02 | 71.7° | 175.0° |
CZ2 | CE3 | CD3 | HE3 | 180.0° | 179.8° |
CZ2 | CE3 | CD3 | CG2 | 0.0° | 0.0° |
CE3 | CZ2 | CE4 | CD4 | 0.2° | 0.5° |
CZ2 | CE3 | CD3 | HD3 | 179.9° | 180.0° |
CE3 | CZ2 | CE4 | HE4 | 179.9° | 180.0° |
CE3 | CZ2 | OH | HOH | 180.0° | 90.0° |
CD3 | CE3 | CZ2 | CE4 | 0.2° | 0.3° |
CE3 | CD3 | CG2 | HD3 | 180.0° | 180.0° |
CE3 | CD3 | CG2 | CD4 | 0.2° | 0.0° |
CE3 | CD3 | CG2 | CB2 | 179.7° | 179.7° |
CZ2 | CE4 | CD4 | HE4 | 180.0° | 179.4° |
CZ2 | CE4 | CD4 | CG2 | 0.1° | 0.5° |
CZ2 | CE4 | CD4 | HD4 | 179.9° | 179.5° |
CE4 | CZ2 | CE3 | HE3 | 179.8° | 180.0° |
CE4 | CZ2 | OH | HOH | 0.2° | 90.3° |
CB1 | SG | C0 | CA0 | 113.0° | 139.0° |
SG | CB1 | CA1 | HB11 | 120.0° | 118.1° |
SG | CB1 | CA1 | HB12 | 120.0° | 118.1° |
CB1 | SG | C0 | N1 | 4.3° | 20.8° |
CB1 | SG | C0 | O0 | 135.7° | 97.6° |
SG | CB1 | CA1 | N1 | 7.2° | 15.8° |
SG | CB1 | CA1 | C1 | 174.0° | 164.2° |
SG | CB1 | HB11 | HB12 | 116.3° | 124.0° |
SG | C0 | CA0 | N1 | 120.9° | 113.1° |
SG | C0 | CA0 | O0 | 123.6° | 123.6° |
C0 | SG | CB1 | CA1 | 2.1° | 20.5° |
SG | C0 | N1 | O0 | 134.0° | 118.4° |
SG | C0 | N1 | CA1 | 11.1° | 16.0° |
SG | C0 | CA0 | HA0 | 163.8° | 173.1° |
SG | C0 | O0 | HO1 | 180.0° | 56.5° |
C0 | SG | CB1 | HB11 | 117.9° | 138.5° |
C0 | SG | CB1 | HB12 | 122.1° | 97.6° |
CA0 | C0 | N1 | O0 | 104.7° | 123.3° |
CA0 | C0 | N1 | CA1 | 110.2° | 134.3° |
C0 | CA0 | N0 | H | 53.0° | 64.0° |
C0 | CA0 | N0 | H2 | 67.0° | 60.0° |
CA0 | C0 | O0 | HO1 | 60.7° | 180.0° |
C0 | CA0 | CB0 | HB01 | 65.6° | 65.0° |
C0 | CA0 | CB0 | HB02 | 54.3° | 55.0° |
CB1 | CA1 | N1 | C0 | 11.2° | 0.1° |
CB1 | CA1 | N1 | C1 | 178.6° | 180.0° |
CB1 | CA1 | C1 | N2 | 0.2° | 38.0° |
CB1 | CA1 | C1 | N3 | 179.4° | 155.0° |
CA1 | CB1 | HB11 | HB12 | 116.3° | 123.8° |
CD3 | CG2 | CD4 | CE4 | 0.3° | 0.2° |
CD3 | CG2 | CD4 | CB2 | 179.9° | 179.7° |
CD3 | CG2 | CB2 | CA2 | 0.3° | 89.7° |
CD3 | CG2 | CB2 | HB21 | 119.6° | 150.3° |
CD3 | CG2 | CD4 | HD4 | 179.7° | 179.8° |
CG2 | CD3 | CE3 | HE3 | 180.0° | 179.8° |
CE4 | CD4 | CG2 | HD4 | 180.0° | 180.0° |
CE4 | CD4 | CG2 | CB2 | 179.7° | 180.0° |
C0 | N1 | CA1 | C1 | 170.2° | 179.9° |
N1 | C0 | CA0 | HA0 | 75.4° | 60.0° |
N1 | C0 | O0 | HO1 | 49.1° | 56.7° |
O0 | C0 | N1 | CA1 | 145.1° | 102.4° |
O0 | C0 | CA0 | HA0 | 40.2° | 63.3° |
CD4 | CG2 | CB2 | CA2 | 179.7° | 90.0° |
CD4 | CG2 | CB2 | HB21 | 60.3° | 30.0° |
CD4 | CG2 | CD3 | HD3 | 179.7° | 180.0° |
CG2 | CD4 | CE4 | HE4 | 179.9° | 180.0° |
CG2 | CB2 | CA2 | N2 | 0.2° | 0.0° |
CG2 | CB2 | CA2 | HB21 | 120.0° | 120.0° |
CG2 | CB2 | CA2 | C2 | 180.0° | 180.0° |
CB2 | CG2 | CD3 | HD3 | 0.3° | 0.3° |
CB2 | CG2 | CD4 | HD4 | 0.3° | 0.0° |
N1 | CA1 | C1 | N2 | 178.5° | 142.0° |
N1 | CA1 | C1 | N3 | 2.3° | 25.0° |
N1 | CA1 | CB1 | HB11 | 112.8° | 133.9° |
N1 | CA1 | CB1 | HB12 | 127.2° | 102.3° |
CA1 | C1 | N2 | N3 | 179.3° | 119.2° |
CA1 | C1 | N2 | CA2 | 179.6° | 119.2° |
CA1 | C1 | N3 | C2 | 180.0° | 119.3° |
CA1 | C1 | N3 | CA3 | 15.9° | 60.8° |
C1 | CA1 | CB1 | HB11 | 66.0° | 46.1° |
C1 | CA1 | CB1 | HB12 | 54.0° | 77.7° |
C1 | N2 | CA2 | CB2 | 179.7° | 180.0° |
C1 | N2 | CA2 | C2 | 0.1° | 0.0° |
N2 | C1 | N3 | C2 | 0.7° | 0.0° |
N2 | C1 | N3 | CA3 | 163.4° | 179.9° |
CA2 | N2 | C1 | N3 | 0.3° | 0.0° |
N2 | CA2 | CB2 | C2 | 179.8° | 180.0° |
N2 | CA2 | C2 | N3 | 0.5° | 0.0° |
N2 | CA2 | C2 | O2 | 179.8° | 179.9° |
N2 | CA2 | CB2 | HB21 | 120.2° | 120.0° |
C1 | N3 | C2 | CA2 | 0.7° | 0.0° |
C1 | N3 | C2 | CA3 | 166.7° | 179.9° |
C1 | N3 | C2 | O2 | 180.0° | 179.9° |
C1 | N3 | CA3 | C3 | 87.0° | 90.0° |
C1 | N3 | CA3 | HA31 | 153.0° | 150.0° |
C1 | N3 | CA3 | HA32 | 33.0° | 30.1° |
CB2 | CA2 | C2 | N3 | 179.3° | 180.0° |
CB2 | CA2 | C2 | O2 | 0.0° | 0.1° |
CA2 | C2 | N3 | O2 | 179.3° | 179.9° |
CA2 | C2 | N3 | CA3 | 166.0° | 180.0° |
C2 | CA2 | CB2 | HB21 | 60.0° | 60.0° |
C2 | N3 | CA3 | C3 | 109.9° | 89.9° |
C2 | N3 | CA3 | HA31 | 10.1° | 30.1° |
C2 | N3 | CA3 | HA32 | 130.1° | 150.1° |
CA3 | N3 | C2 | O2 | 13.2° | 0.2° |
N3 | CA3 | C3 | HA31 | 120.0° | 120.0° |
N3 | CA3 | C3 | HA32 | 120.0° | 120.0° |
N3 | CA3 | C3 | O3 | 179.5° | 0.0° |
N3 | CA3 | C3 | OXT | 2.0° | 180.0° |
N3 | CA3 | HA31 | HA32 | 115.0° | 120.0° |
CA3 | C3 | O3 | OXT | 178.3° | 180.0° |
C3 | CA3 | HA31 | HA32 | 115.0° | 120.0° |
CA3 | C3 | OXT | HXT | 178.4° | 180.0° |
O3 | C3 | CA3 | HA31 | 59.5° | 120.0° |
O3 | C3 | CA3 | HA32 | 60.5° | 120.0° |
O3 | C3 | OXT | HXT | 0.0° | 0.0° |
OXT | C3 | CA3 | HA31 | 122.0° | 60.0° |
OXT | C3 | CA3 | HA32 | 117.9° | 60.0° |
H | N0 | CA0 | HA0 | 62.6° | 56.0° |
H2 | N0 | CA0 | HA0 | 177.4° | 180.0° |
HA0 | CA0 | CB0 | HB01 | 49.8° | 175.0° |
HA0 | CA0 | CB0 | HB02 | 169.7° | 65.0° |
HD1 | CD1 | CE1 | HE1 | 0.1° | 0.0° |
HE1 | CE1 | CZ1 | HZ1 | 0.2° | 0.1° |
HZ1 | CZ1 | CE2 | HE2 | 0.1° | 0.0° |
HE2 | CE2 | CD2 | HD2 | 0.0° | 0.3° |
HD3 | CD3 | CE3 | HE3 | 0.1° | 0.2° |
HD4 | CD4 | CE4 | HE4 | 0.1° | 0.0° |