CFB

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
O5'	C5'	sing	1.43Å	1.43Å
O5'	H5'	sing	0.97Å	0.95Å
C5'	C4'	sing	1.53Å	1.53Å
C5'	H5'1	sing	1.09Å	1.10Å
C5'	H5'2	sing	1.09Å	1.10Å
C4'	O4'	sing	1.44Å	1.44Å
C4'	C3'	sing	1.55Å	1.53Å
C4'	H4'	sing	1.09Å	1.10Å
O4'	C1'	sing	1.44Å	1.43Å
C3'	O3'	sing	1.43Å	1.43Å
C3'	C2'	sing	1.55Å	1.53Å
C3'	H3'	sing	1.09Å	1.10Å
O3'	H1	sing	0.97Å	0.95Å
C2'	F	sing	1.40Å	1.39Å
C2'	C1'	sing	1.54Å	1.53Å
C2'	H2'	sing	1.09Å	1.10Å
C1'	N9	sing	1.47Å	1.48Å
C1'	H1'	sing	1.09Å	1.10Å
N9	C8	sing	1.36Å	1.33Å	Aromatic
N9	C4	sing	1.37Å	1.33Å	Aromatic
C8	N7	doub	1.30Å	1.33Å	Aromatic
C8	H8	sing	1.08Å	1.08Å
N7	C5	sing	1.36Å	1.33Å	Aromatic
C5	C4	doub	1.40Å	1.39Å	Aromatic
C5	C6	sing	1.41Å	1.39Å	Aromatic
C4	N3	sing	1.33Å	1.34Å	Aromatic
N3	C2	doub	1.32Å	1.34Å	Aromatic
C2	CL	sing	1.74Å	1.73Å
C2	N1	sing	1.32Å	1.34Å	Aromatic
N1	C6	doub	1.33Å	1.34Å	Aromatic
C6	N6	sing	1.38Å	1.33Å
N6	HN61	sing	0.97Å	1.00Å
N6	HN62	sing	0.97Å	1.00Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
C5'	O5'	H5'	109.5°	106.8°
O5'	C5'	C4'	110.0°	109.5°
O5'	C5'	H5'1	109.1°	109.4°
O5'	C5'	H5'2	109.2°	109.4°
C4'	C5'	H5'1	109.1°	109.5°
C4'	C5'	H5'2	109.3°	109.5°
C5'	C4'	O4'	108.0°	110.4°
C5'	C4'	C3'	112.6°	110.4°
C5'	C4'	H4'	107.4°	110.4°
H5'1	C5'	H5'2	110.0°	109.4°
O4'	C4'	C3'	106.5°	104.8°
O4'	C4'	H4'	113.5°	110.4°
C4'	O4'	C1'	106.8°	105.3°
C3'	C4'	H4'	108.9°	110.4°
C4'	C3'	O3'	109.0°	110.5°
C4'	C3'	C2'	103.7°	104.1°
C4'	C3'	H3'	113.4°	110.5°
O4'	C1'	C2'	102.9°	104.9°
O4'	C1'	N9	109.7°	110.4°
O4'	C1'	H1'	115.2°	110.4°
O3'	C3'	C2'	109.5°	110.5°
O3'	C3'	H3'	108.1°	110.5°
C3'	O3'	H1	109.5°	106.8°
C2'	C3'	H3'	113.0°	110.6°
C3'	C2'	F	112.5°	110.5°
C3'	C2'	C1'	99.6°	104.0°
C3'	C2'	H2'	115.9°	110.5°
F	C2'	C1'	114.8°	110.6°
F	C2'	H2'	101.1°	110.4°
C1'	C2'	H2'	113.7°	110.7°
C2'	C1'	N9	113.9°	110.4°
C2'	C1'	H1'	111.0°	110.3°
N9	C1'	H1'	104.4°	110.3°
C1'	N9	C8	125.7°	126.2°
C1'	N9	C4	126.2°	126.3°
C8	N9	C4	107.9°	107.5°
N9	C8	N7	109.8°	109.9°
N9	C8	H8	125.1°	125.1°
N9	C4	C5	107.1°	106.0°
N9	C4	N3	133.1°	134.9°
N7	C8	H8	125.1°	125.0°
C8	N7	C5	107.7°	109.4°
N7	C5	C4	107.4°	107.1°
N7	C5	C6	134.0°	134.6°
C4	C5	C6	118.6°	118.2°
C5	C4	N3	119.8°	119.1°
C5	C6	N1	119.3°	118.5°
C5	C6	N6	120.7°	120.7°
C4	N3	C2	120.5°	120.6°
N3	C2	CL	119.4°	118.8°
N3	C2	N1	121.0°	122.4°
CL	C2	N1	119.6°	118.8°
C2	N1	C6	120.9°	121.2°
N1	C6	N6	120.0°	120.8°
C6	N6	HN61	109.4°	120.0°
C6	N6	HN62	109.5°	120.1°
HN61	N6	HN62	109.5°	120.0°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O5'	C5'	C4'	H5'1	119.7°	120.0°
O5'	C5'	C4'	H5'2	120.0°	120.0°
O5'	C5'	H5'1	H5'2	119.8°	119.9°
O5'	C5'	C4'	O4'	49.0°	66.5°
O5'	C5'	C4'	C3'	68.3°	178.1°
O5'	C5'	C4'	H4'	171.7°	55.8°
H5'	O5'	C5'	C4'	85.9°	180.0°
H5'	O5'	C5'	H5'1	33.9°	60.0°
H5'	O5'	C5'	H5'2	154.1°	60.0°
C4'	C5'	H5'1	H5'2	119.9°	120.1°
C5'	C4'	O4'	C3'	121.2°	118.9°
C5'	C4'	O4'	H4'	119.0°	122.3°
C5'	C4'	C3'	H4'	119.1°	122.3°
C5'	C4'	O4'	C1'	140.2°	159.4°
C5'	C4'	C3'	O3'	135.1°	98.4°
C5'	C4'	C3'	C2'	108.3°	142.9°
C5'	C4'	C3'	H3'	14.6°	24.2°
H5'1	C5'	C4'	O4'	70.8°	173.5°
H5'1	C5'	C4'	C3'	171.9°	58.2°
H5'1	C5'	C4'	H4'	52.0°	64.2°
H5'2	C5'	C4'	O4'	168.9°	53.5°
H5'2	C5'	C4'	C3'	51.6°	61.9°
H5'2	C5'	C4'	H4'	68.3°	175.8°
O4'	C4'	C3'	H4'	122.7°	118.8°
O4'	C4'	C3'	O3'	106.7°	142.7°
O4'	C4'	C3'	C2'	9.9°	24.1°
O4'	C4'	C3'	H3'	132.8°	94.7°
C4'	O4'	C1'	C2'	40.5°	40.5°
C4'	O4'	C1'	N9	162.1°	159.4°
C4'	O4'	C1'	H1'	80.5°	78.4°
C3'	C4'	O4'	C1'	19.0°	40.5°
C4'	C3'	O3'	C2'	112.9°	114.7°
C4'	C3'	O3'	H3'	123.7°	122.6°
C4'	C3'	C2'	H3'	123.2°	118.7°
C4'	C3'	O3'	H1	151.6°	180.0°
C4'	C3'	C2'	F	89.6°	118.8°
C4'	C3'	C2'	C1'	32.5°	0.2°
C4'	C3'	C2'	H2'	154.8°	118.6°
H4'	C4'	O4'	C1'	100.8°	78.3°
H4'	C4'	C3'	O3'	16.0°	23.9°
H4'	C4'	C3'	C2'	132.6°	94.7°
H4'	C4'	C3'	H3'	104.5°	146.5°
O4'	C1'	C2'	C3'	44.8°	23.8°
O4'	C1'	C2'	F	75.7°	94.8°
O4'	C1'	C2'	N9	118.7°	118.9°
O4'	C1'	C2'	H1'	123.7°	118.9°
O4'	C1'	C2'	H2'	168.7°	142.5°
O4'	C1'	N9	H1'	123.9°	122.3°
O4'	C1'	N9	C8	19.7°	22.1°
O4'	C1'	N9	C4	155.9°	157.9°
O3'	C3'	C2'	H3'	120.5°	122.6°
O3'	C3'	C2'	F	154.1°	122.5°
O3'	C3'	C2'	C1'	83.8°	118.8°
O3'	C3'	C2'	H2'	38.6°	0.0°
C2'	C3'	O3'	H1	38.8°	65.3°
C3'	C2'	F	C1'	113.0°	114.6°
C3'	C2'	F	H2'	124.2°	122.6°
C3'	C2'	C1'	H2'	123.9°	118.7°
C3'	C2'	C1'	N9	163.5°	142.8°
C3'	C2'	C1'	H1'	79.0°	95.0°
H3'	C3'	O3'	H1	84.7°	57.4°
H3'	C3'	C2'	F	33.6°	0.1°
H3'	C3'	C2'	C1'	155.7°	118.6°
H3'	C3'	C2'	H2'	82.0°	122.7°
F	C2'	C1'	H2'	115.7°	122.7°
F	C2'	C1'	N9	43.1°	24.1°
F	C2'	C1'	H1'	160.6°	146.3°
C2'	C1'	N9	H1'	121.3°	122.2°
C2'	C1'	N9	C8	95.1°	93.5°
C2'	C1'	N9	C4	89.3°	86.5°
H2'	C2'	C1'	N9	72.6°	98.5°
H2'	C2'	C1'	H1'	44.9°	23.6°
C1'	N9	C8	C4	176.3°	180.0°
C1'	N9	C8	N7	175.6°	180.0°
C1'	N9	C8	H8	4.4°	0.0°
C1'	N9	C4	C5	175.4°	179.8°
C1'	N9	C4	N3	4.7°	0.0°
H1'	C1'	N9	C8	143.7°	144.3°
H1'	C1'	N9	C4	32.0°	35.7°
N9	C8	N7	H8	180.0°	180.0°
N9	C8	N7	C5	0.2°	0.2°
C8	N9	C4	C5	0.8°	0.2°
C8	N9	C4	N3	179.0°	180.0°
C4	N9	C8	N7	0.7°	0.0°
C4	N9	C8	H8	179.3°	180.0°
N9	C4	C5	N7	0.7°	0.4°
N9	C4	C5	N3	179.9°	179.8°
N9	C4	C5	C6	179.6°	179.7°
N9	C4	N3	C2	179.9°	180.0°
C8	N7	C5	C4	0.3°	0.3°
C8	N7	C5	C6	179.9°	179.6°
H8	C8	N7	C5	179.8°	179.8°
N7	C5	C4	C6	179.6°	179.4°
N7	C5	C4	N3	179.1°	179.8°
N7	C5	C6	N1	179.0°	179.6°
N7	C5	C6	N6	1.7°	0.6°
C5	C4	N3	C2	0.1°	0.2°
C4	C5	C6	N1	0.5°	0.4°
C4	C5	C6	N6	178.7°	179.8°
C6	C5	C4	N3	0.5°	0.5°
C5	C6	N1	C2	0.1°	0.2°
C5	C6	N1	N6	179.3°	179.8°
C5	C6	N6	HN61	45.9°	179.8°
C5	C6	N6	HN62	74.1°	0.5°
C4	N3	C2	CL	178.6°	180.0°
C4	N3	C2	N1	0.3°	0.0°
N3	C2	CL	N1	179.0°	180.0°
N3	C2	N1	C6	0.3°	0.0°
CL	C2	N1	C6	178.6°	180.0°
C2	N1	C6	N6	179.1°	180.0°
N1	C6	N6	HN61	134.9°	0.0°
N1	C6	N6	HN62	105.1°	179.7°
C6	N6	HN61	HN62	120.0°	179.7°

Definition date:	2005-07-14
Last modified:	2021-03-01
Release status:	REL
Processing site:	RCSB