CDE
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.47Å | 1.44Å | |
N | H | sing | 1.01Å | 1.02Å | |
N | H2 | sing | 1.01Å | 1.02Å | |
CA | CB | sing | 1.53Å | 1.52Å | |
CA | C | sing | 1.53Å | 1.51Å | |
CA | HA | sing | 1.09Å | 1.12Å | |
CB | CG1 | sing | 1.53Å | 1.51Å | |
CB | CG2 | sing | 1.53Å | 1.48Å | |
CB | HB | sing | 1.09Å | 1.12Å | |
CG1 | HG11 | sing | 1.09Å | 1.11Å | |
CG1 | HG12 | sing | 1.09Å | 1.11Å | |
CG1 | HG13 | sing | 1.09Å | 1.11Å | |
CG2 | HG21 | sing | 1.09Å | 1.11Å | |
CG2 | HG22 | sing | 1.09Å | 1.11Å | |
CG2 | HG23 | sing | 1.09Å | 1.12Å | |
C | HC1 | sing | 1.09Å | 1.11Å | |
C | HC2 | sing | 1.09Å | 1.12Å | |
C | HC3 | sing | 1.09Å | 1.11Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CA | N | H | 110.9° | 106.7° |
CA | N | H2 | 111.7° | 106.7° |
N | CA | CB | 110.8° | 109.5° |
N | CA | C | 106.1° | 109.5° |
N | CA | HA | 111.1° | 109.5° |
H | N | H2 | 111.7° | 106.7° |
CB | CA | C | 110.4° | 109.5° |
CB | CA | HA | 106.9° | 109.5° |
CA | CB | CG1 | 111.3° | 109.5° |
CA | CB | CG2 | 108.6° | 109.5° |
CA | CB | HB | 108.8° | 109.5° |
C | CA | HA | 111.6° | 109.5° |
CA | C | HC1 | 106.1° | 109.5° |
CA | C | HC2 | 113.4° | 109.5° |
CA | C | HC3 | 113.4° | 109.5° |
CG1 | CB | CG2 | 109.4° | 109.4° |
CG1 | CB | HB | 108.0° | 109.5° |
CB | CG1 | HG11 | 111.3° | 109.6° |
CB | CG1 | HG12 | 111.5° | 109.4° |
CB | CG1 | HG13 | 111.5° | 109.5° |
CG2 | CB | HB | 110.7° | 109.4° |
CB | CG2 | HG21 | 108.6° | 109.5° |
CB | CG2 | HG22 | 112.6° | 109.5° |
CB | CG2 | HG23 | 112.5° | 109.5° |
HG11 | CG1 | HG12 | 111.5° | 109.4° |
HG11 | CG1 | HG13 | 111.6° | 109.5° |
HG12 | CG1 | HG13 | 98.9° | 109.4° |
HG21 | CG2 | HG22 | 112.6° | 109.4° |
HG21 | CG2 | HG23 | 112.5° | 109.5° |
HG22 | CG2 | HG23 | 97.9° | 109.5° |
HC1 | C | HC2 | 113.5° | 109.5° |
HC1 | C | HC3 | 113.5° | 109.5° |
HC2 | C | HC3 | 97.0° | 109.4° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
CA | N | H | H2 | 125.3° | 113.8° |
N | CA | CB | C | 117.3° | 120.0° |
N | CA | CB | HA | 121.2° | 120.0° |
N | CA | C | HA | 121.1° | 120.0° |
N | CA | CB | CG1 | 134.9° | 59.9° |
N | CA | CB | CG2 | 104.6° | 60.0° |
N | CA | CB | HB | 16.0° | 180.0° |
N | CA | C | HC1 | 180.0° | 60.0° |
N | CA | C | HC2 | 54.7° | 180.0° |
N | CA | C | HC3 | 54.7° | 60.0° |
H | N | CA | CB | 180.0° | 53.8° |
H | N | CA | C | 60.1° | 173.8° |
H | N | CA | HA | 61.3° | 66.2° |
H2 | N | CA | CB | 54.7° | 60.1° |
H2 | N | CA | C | 174.6° | 60.0° |
H2 | N | CA | HA | 64.0° | 180.0° |
CB | CA | C | HA | 118.7° | 120.0° |
CA | CB | CG1 | CG2 | 120.0° | 120.0° |
CA | CB | CG1 | HB | 119.4° | 120.1° |
CA | CB | CG2 | HB | 119.4° | 120.0° |
CA | CB | CG1 | HG11 | 180.0° | 180.0° |
CA | CB | CG1 | HG12 | 54.7° | 60.0° |
CA | CB | CG1 | HG13 | 54.7° | 59.9° |
CA | CB | CG2 | HG21 | 180.0° | 60.0° |
CA | CB | CG2 | HG22 | 54.7° | 60.0° |
CA | CB | CG2 | HG23 | 54.8° | 180.0° |
CB | CA | C | HC1 | 59.8° | 180.0° |
CB | CA | C | HC2 | 65.4° | 60.0° |
CB | CA | C | HC3 | 174.9° | 60.0° |
C | CA | CB | CG1 | 17.6° | 180.0° |
C | CA | CB | CG2 | 138.1° | 60.0° |
C | CA | CB | HB | 101.3° | 60.0° |
CA | C | HC1 | HC2 | 125.2° | 120.0° |
CA | C | HC1 | HC3 | 125.3° | 120.0° |
CA | C | HC2 | HC3 | 119.3° | 120.0° |
HA | CA | CB | CG1 | 103.9° | 60.0° |
HA | CA | CB | CG2 | 16.6° | 180.0° |
HA | CA | CB | HB | 137.2° | 60.0° |
HA | CA | C | HC1 | 58.9° | 60.0° |
HA | CA | C | HC2 | 175.8° | 60.0° |
HA | CA | C | HC3 | 66.4° | 180.0° |
CG1 | CB | CG2 | HB | 118.9° | 120.0° |
CB | CG1 | HG11 | HG12 | 125.2° | 120.0° |
CB | CG1 | HG11 | HG13 | 125.3° | 120.1° |
CB | CG1 | HG12 | HG13 | 117.4° | 120.0° |
CG1 | CB | CG2 | HG21 | 58.3° | 60.0° |
CG1 | CB | CG2 | HG22 | 67.0° | 180.0° |
CG1 | CB | CG2 | HG23 | 176.5° | 60.0° |
CG2 | CB | CG1 | HG11 | 60.0° | 60.0° |
CG2 | CB | CG1 | HG12 | 174.8° | 180.0° |
CG2 | CB | CG1 | HG13 | 65.3° | 60.1° |
CB | CG2 | HG21 | HG22 | 125.3° | 120.0° |
CB | CG2 | HG21 | HG23 | 125.2° | 120.0° |
CB | CG2 | HG22 | HG23 | 118.5° | 120.0° |
HB | CB | CG1 | HG11 | 60.6° | 59.9° |
HB | CB | CG1 | HG12 | 64.6° | 60.1° |
HB | CB | CG1 | HG13 | 174.1° | 180.0° |
HB | CB | CG2 | HG21 | 60.5° | 180.0° |
HB | CB | CG2 | HG22 | 174.1° | 60.0° |
HB | CB | CG2 | HG23 | 64.6° | 60.0° |
HG11 | CG1 | HG12 | HG13 | 117.5° | 120.0° |
HG21 | CG2 | HG22 | HG23 | 118.4° | 120.0° |
HC1 | C | HC2 | HC3 | 119.5° | 120.0° |