CBR

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
BR	C5	sing	1.86Å	1.94Å
P	OP1	doub	1.50Å	1.48Å
P	OP2	sing	1.62Å	1.49Å
P	O5'	sing	1.62Å	1.59Å
P	OP3	sing	1.62Å	26.35Å
OP2	HOP2	sing	0.98Å	0.95Å
O5'	C5'	sing	1.42Å	1.43Å
N1	C6	sing	1.39Å	1.37Å
N1	C2	sing	1.41Å	1.40Å
N1	C1'	sing	1.43Å	1.47Å
C6	C5	doub	1.33Å	1.34Å
C6	H6	sing	1.09Å	1.10Å
C2	O2	doub	1.23Å	1.24Å
C2	N3	sing	1.38Å	1.35Å
N3	C4	doub	1.31Å	1.34Å
C4	N4	sing	1.38Å	1.34Å
C4	C5	sing	1.50Å	1.42Å
N4	H41	sing	0.99Å	1.02Å
N4	H42	sing	0.99Å	1.02Å
C2'	C1'	sing	1.52Å	1.52Å
C2'	C3'	sing	1.51Å	1.52Å
C2'	H2'	sing	1.10Å	1.11Å
C2'	H2''	sing	1.09Å	1.12Å
C5'	C4'	sing	1.52Å	1.51Å
C5'	H5'	sing	1.09Å	1.11Å
C5'	H5''	sing	1.09Å	1.12Å
C4'	O4'	sing	1.44Å	1.45Å
C4'	C3'	sing	1.52Å	1.53Å
C4'	H4'	sing	1.09Å	1.11Å
O4'	C1'	sing	1.43Å	1.41Å
C1'	H1'	sing	1.10Å	1.11Å
C3'	O3'	sing	1.43Å	1.43Å
C3'	H3'	sing	1.09Å	1.11Å
O3'	HO3'	sing	0.97Å	0.95Å
OP3	HOP3	sing	0.98Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
BR	C5	C6	121.4°	123.3°
BR	C5	C4	120.6°	120.7°
OP1	P	OP2	119.7°	115.3°
OP1	P	O5'	107.3°	115.0°
OP1	P	OP3	157.9°	115.0°
OP2	P	O5'	108.0°	103.7°
OP2	P	OP3	50.3°	103.3°
P	OP2	HOP2	119.7°	118.9°
O5'	P	OP3	94.8°	102.9°
P	O5'	C5'	120.4°	118.5°
P	OP3	HOP3	157.9°	118.9°
O5'	C5'	C4'	110.0°	108.9°
O5'	C5'	H5'	112.0°	109.0°
O5'	C5'	H5''	112.0°	108.9°
C6	N1	C2	120.1°	119.5°
C6	N1	C1'	121.6°	120.2°
N1	C6	C5	120.7°	122.9°
N1	C6	H6	120.7°	115.3°
C2	N1	C1'	118.3°	120.3°
N1	C2	O2	118.9°	121.1°
N1	C2	N3	119.5°	118.8°
N1	C1'	C2'	116.4°	112.8°
N1	C1'	O4'	108.0°	109.3°
N1	C1'	H1'	104.5°	107.8°
C5	C6	H6	118.6°	121.8°
C6	C5	C4	117.8°	116.0°
O2	C2	N3	121.6°	120.2°
C2	N3	C4	120.0°	121.4°
N3	C4	N4	118.0°	118.8°
N3	C4	C5	121.9°	121.4°
N4	C4	C5	120.1°	119.9°
C4	N4	H41	118.1°	118.0°
C4	N4	H42	109.2°	117.9°
H41	N4	H42	109.0°	124.1°
C1'	C2'	C3'	102.6°	102.5°
C1'	C2'	H2'	114.8°	110.6°
C1'	C2'	H2''	114.8°	111.7°
C2'	C1'	O4'	105.0°	107.4°
C2'	C1'	H1'	107.5°	111.5°
C3'	C2'	H2'	114.9°	109.7°
C3'	C2'	H2''	114.8°	114.1°
C2'	C3'	C4'	104.4°	103.1°
C2'	C3'	O3'	112.7°	109.7°
C2'	C3'	H3'	110.8°	113.2°
H2'	C2'	H2''	95.7°	108.3°
C4'	C5'	H5'	112.1°	110.3°
C4'	C5'	H5''	112.0°	110.3°
C5'	C4'	O4'	109.6°	107.9°
C5'	C4'	C3'	113.9°	112.9°
C5'	C4'	H4'	105.4°	109.5°
H5'	C5'	H5''	98.4°	109.3°
O4'	C4'	C3'	106.4°	106.2°
O4'	C4'	H4'	113.0°	107.9°
C4'	O4'	C1'	108.7°	109.3°
C3'	C4'	H4'	108.7°	112.2°
C4'	C3'	O3'	109.5°	109.9°
C4'	C3'	H3'	113.8°	113.5°
O4'	C1'	H1'	115.9°	108.0°
O3'	C3'	H3'	105.8°	107.4°
C3'	O3'	HO3'	112.6°	107.3°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
BR	C5	C6	N1	173.7°	180.0°
BR	C5	C6	C4	174.7°	180.0°
BR	C5	C6	H6	6.3°	0.0°
BR	C5	C4	N3	172.9°	180.0°
BR	C5	C4	N4	7.8°	0.1°
OP1	P	OP2	O5'	123.0°	126.6°
OP1	P	OP2	OP3	155.9°	126.3°
OP1	P	O5'	OP3	179.9°	125.8°
OP1	P	OP2	HOP2	180.0°	48.8°
OP1	P	O5'	C5'	48.7°	179.9°
OP1	P	OP3	HOP3	180.0°	48.0°
OP2	P	O5'	OP3	49.7°	107.4°
OP2	P	O5'	C5'	179.0°	53.2°
OP2	P	OP3	HOP3	109.7°	78.5°
O5'	P	OP2	HOP2	57.0°	175.4°
P	O5'	C5'	C4'	175.4°	180.0°
P	O5'	C5'	H5'	59.2°	59.6°
P	O5'	C5'	H5''	50.2°	59.6°
O5'	P	OP3	HOP3	0.3°	173.8°
OP3	P	OP2	HOP2	24.0°	77.5°
OP3	P	O5'	C5'	131.4°	54.2°
O5'	C5'	C4'	H5'	125.3°	119.6°
O5'	C5'	C4'	H5''	125.3°	119.5°
O5'	C5'	H5'	H5''	117.9°	119.0°
O5'	C5'	C4'	O4'	67.3°	62.4°
O5'	C5'	C4'	C3'	51.8°	179.5°
O5'	C5'	C4'	H4'	170.8°	54.7°
C6	N1	C2	C1'	179.9°	180.0°
N1	C6	C5	H6	180.0°	180.0°
C6	N1	C2	O2	178.1°	179.9°
C6	N1	C2	N3	1.4°	0.0°
N1	C6	C5	C4	1.0°	0.0°
C6	N1	C1'	C2'	41.0°	86.5°
C6	N1	C1'	O4'	76.7°	32.9°
C6	N1	C1'	H1'	159.3°	150.0°
C2	N1	C6	C5	0.6°	0.0°
C2	N1	C6	H6	179.4°	180.0°
N1	C2	O2	N3	179.5°	179.9°
N1	C2	N3	C4	0.5°	0.0°
C2	N1	C1'	C2'	138.9°	93.5°
C2	N1	C1'	O4'	103.4°	147.1°
C2	N1	C1'	H1'	20.6°	30.0°
C1'	N1	C6	C5	179.3°	180.0°
C1'	N1	C6	H6	0.7°	0.0°
C1'	N1	C2	O2	2.0°	0.1°
C1'	N1	C2	N3	178.5°	180.0°
N1	C1'	C2'	O4'	119.3°	120.5°
N1	C1'	C2'	H1'	116.7°	121.4°
N1	C1'	C2'	C3'	155.0°	147.4°
N1	C1'	C2'	H2'	79.8°	30.6°
N1	C1'	C2'	H2''	29.7°	90.1°
N1	C1'	O4'	C4'	158.8°	131.7°
N1	C1'	O4'	H1'	116.8°	117.0°
C6	C5	C4	N3	1.9°	0.0°
C6	C5	C4	N4	177.4°	179.9°
H6	C6	C5	C4	179.0°	180.0°
O2	C2	N3	C4	178.9°	179.9°
C2	N3	C4	N4	178.2°	179.9°
C2	N3	C4	C5	1.1°	0.0°
N3	C4	N4	C5	179.4°	180.0°
N3	C4	N4	H41	180.0°	173.9°
N3	C4	N4	H42	54.8°	6.1°
C4	N4	H41	H42	125.3°	180.0°
C5	C4	N4	H41	0.6°	6.1°
C5	C4	N4	H42	125.9°	173.9°
C1'	C2'	C3'	H2'	125.3°	117.5°
C1'	C2'	C3'	H2''	125.2°	120.8°
C1'	C2'	H2'	H2''	120.7°	122.7°
C2'	C1'	O4'	C4'	34.0°	9.0°
C1'	C2'	C3'	C4'	23.9°	33.4°
C2'	C1'	O4'	H1'	118.5°	120.3°
C1'	C2'	C3'	O3'	94.9°	83.6°
C1'	C2'	C3'	H3'	146.8°	156.4°
C3'	C2'	H2'	H2''	120.7°	125.1°
C2'	C3'	C4'	C5'	115.9°	88.8°
C2'	C3'	C4'	O4'	4.9°	29.2°
C2'	C3'	C4'	O3'	120.9°	116.9°
C2'	C3'	C4'	H3'	120.9°	122.8°
C2'	C3'	C4'	H4'	126.9°	146.9°
C3'	C2'	C1'	O4'	35.7°	26.9°
C3'	C2'	C1'	H1'	88.4°	91.2°
C2'	C3'	O3'	H3'	121.2°	123.4°
C2'	C3'	O3'	HO3'	180.0°	120.1°
H2'	C2'	C3'	C4'	149.2°	84.1°
H2'	C2'	C1'	O4'	161.0°	90.0°
H2'	C2'	C1'	H1'	36.9°	151.9°
H2'	C2'	C3'	O3'	30.4°	158.9°
H2'	C2'	C3'	H3'	87.9°	38.9°
H2''	C2'	C3'	C4'	101.3°	154.3°
H2''	C2'	C1'	O4'	89.6°	149.4°
H2''	C2'	C1'	H1'	146.4°	31.3°
H2''	C2'	C3'	O3'	139.9°	37.2°
H2''	C2'	C3'	H3'	21.6°	82.7°
C4'	C5'	H5'	H5''	117.9°	121.5°
C5'	C4'	O4'	C3'	123.6°	121.4°
C5'	C4'	O4'	H4'	117.2°	118.2°
C5'	C4'	C3'	H4'	117.1°	124.3°
C5'	C4'	O4'	C1'	141.7°	108.6°
C5'	C4'	C3'	O3'	123.2°	154.2°
C5'	C4'	C3'	H3'	5.0°	34.0°
H5'	C5'	C4'	O4'	167.5°	57.1°
H5'	C5'	C4'	C3'	73.5°	60.0°
H5'	C5'	C4'	H4'	45.5°	174.3°
H5''	C5'	C4'	O4'	58.0°	178.1°
H5''	C5'	C4'	C3'	177.0°	61.0°
H5''	C5'	C4'	H4'	63.9°	64.8°
O4'	C4'	C3'	H4'	122.0°	117.6°
C4'	O4'	C1'	H1'	84.4°	111.3°
O4'	C4'	C3'	O3'	115.9°	87.7°
O4'	C4'	C3'	H3'	125.8°	152.1°
C3'	C4'	O4'	C1'	18.2°	12.7°
C4'	C3'	O3'	H3'	123.1°	123.9°
C4'	C3'	O3'	HO3'	64.2°	127.2°
H4'	C4'	O4'	C1'	101.0°	133.2°
H4'	C4'	C3'	O3'	6.0°	29.9°
H4'	C4'	C3'	H3'	112.2°	90.3°
H3'	C3'	O3'	HO3'	58.9°	3.4°

Definition date:	2003-07-16
Last modified:	2011-06-04
Release status:	REL
Processing site:	RCSB
Replaces:	C32
Derived from:	1UHX