Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

CAP

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2sing1.53Å1.52Å
C1O1sing1.43Å1.42Å
C1H11sing1.09Å1.12Å
C1H12sing1.09Å1.12Å
C2C3sing1.53Å1.58Å
C2Csing1.51Å1.57Å
C2O2sing1.43Å1.44Å
C3C4sing1.53Å1.55Å
C3O3sing1.43Å1.42Å
C3H3sing1.09Å1.08Å
C4C5sing1.53Å1.54Å
C4O4sing1.43Å1.41Å
C4H4sing1.09Å1.08Å
C5O5sing1.43Å1.44Å
C5H51sing1.09Å1.11Å
C5H52sing1.09Å1.11Å
CO6doub1.21Å1.23Å
CO7sing1.34Å1.24Å
O1P1sing1.61Å1.60Å
O2HO2sing0.97Å0.96Å
O3HO3sing0.97Å0.96Å
O4HO4sing0.97Å0.96Å
O5P2sing1.61Å1.62Å
O7HO7sing0.97Å0.95Å
P1O1Pdoub1.48Å1.48Å
P1O2Psing1.61Å1.47Å
P1O3Psing1.61Å1.59Å
P2O4Pdoub1.48Å1.48Å
P2O5Psing1.61Å1.48Å
P2O6Psing1.61Å1.60Å
O2PHOP2sing0.97Å0.95Å
O3PHOP3sing0.97Å0.95Å
O5PHOP5sing0.97Å0.95Å
O6PHOP6sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1O1111.0°109.5°
C2C1H11111.7°109.4°
C2C1H12111.7°109.5°
C1C2C3109.3°109.5°
C1C2C112.2°109.4°
C1C2O2102.0°109.4°
O1C1H11111.6°109.5°
O1C1H12111.6°109.5°
C1O1P1116.4°106.9°
H11C1H1298.7°109.5°
C3C2C112.2°109.5°
C3C2O2110.0°109.5°
C2C3C4116.9°109.5°
C2C3O3112.1°109.5°
C2C3H3106.5°109.5°
CC2O2110.6°109.5°
C2CO6121.0°120.1°
C2CO7119.8°120.0°
C2O2HO2110.1°106.8°
C4C3O3107.3°109.5°
C4C3H3106.3°109.5°
C3C4C5115.6°109.6°
C3C4O4105.8°109.5°
C3C4H4109.3°109.5°
O3C3H3107.1°109.4°
C3O3HO3109.9°106.8°
C5C4O4107.5°109.5°
C5C4H4109.1°109.4°
C4C5O5109.8°109.6°
C4C5H51112.1°109.5°
C4C5H52112.1°109.5°
O4C4H4109.3°109.4°
C4O4HO4109.8°106.7°
O5C5H51112.1°109.5°
O5C5H52112.0°109.4°
C5O5P2120.3°106.9°
H51C5H5298.4°109.4°
O6CO7119.1°120.0°
CO7HO7119.8°120.0°
O1P1O1P105.7°109.5°
O1P1O2P107.9°109.5°
O1P1O3P102.1°109.5°
O5P2O4P107.9°109.4°
O5P2O5P106.5°109.5°
O5P2O6P101.1°109.5°
O1PP1O2P119.3°109.5°
O1PP1O3P110.9°109.4°
O2PP1O3P109.4°109.5°
P1O2PHOP2107.9°106.8°
P1O3PHOP3102.0°106.8°
O4PP2O5P119.4°109.5°
O4PP2O6P109.8°109.5°
O5PP2O6P110.6°109.4°
P2O5PHOP5106.5°106.9°
P2O6PHOP6101.0°106.8°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1O1H11125.3°120.0°
C2C1O1H12125.3°120.0°
C2C1H11H12117.6°120.0°
C1C2C3C125.1°120.0°
C1C2C3O2111.3°120.0°
C1C2CO2113.2°119.9°
C1C2C3C468.6°174.1°
C1C2C3O3166.9°54.1°
C1C2C3H350.0°65.8°
C1C2CO627.3°120.0°
C1C2CO7150.6°60.1°
C2C1O1P1177.6°180.0°
C1C2O2HO2111.7°64.9°
O1C1H11H12117.5°120.0°
O1C1C2C3168.6°180.0°
O1C1C2C66.3°60.0°
O1C1C2O252.1°60.0°
C1O1P1O1P65.6°60.0°
C1O1P1O2P63.1°180.0°
C1O1P1O3P178.4°60.0°
H11C1C2C366.2°60.0°
H11C1C2C59.0°60.0°
H11C1C2O2177.3°180.0°
H11C1O1P152.2°60.0°
H12C1C2C343.3°60.0°
H12C1C2C168.4°180.0°
H12C1C2O273.2°60.0°
H12C1O1P157.2°60.0°
C3C2CO2123.2°120.0°
C2C3C4O3126.9°120.0°
C2C3C4H3118.8°120.0°
C2C3O3H3116.6°120.0°
C2C3C4C5144.8°174.3°
C2C3C4O496.4°65.6°
C2C3C4H421.2°54.4°
C3C2CO696.2°119.9°
C3C2CO785.9°60.0°
C3C2O2HO2132.3°55.2°
C2C3O3HO364.7°60.1°
CC2C3C456.5°65.9°
CC2C3O367.9°174.1°
CC2C3H3175.1°54.2°
C2CO6O7177.9°179.9°
CC2O2HO27.8°175.2°
C2CO7HO7180.0°180.0°
O2C2C3C4180.0°54.1°
O2C2C3O355.6°65.9°
O2C2C3H361.3°174.2°
O2C2CO6140.5°0.1°
O2C2CO737.4°180.0°
C4C3O3H3113.8°119.9°
C3C4C5O4117.9°120.1°
C3C4C5H4123.7°120.0°
C3C4O4H4117.6°120.0°
C3C4C5O5170.9°180.0°
C3C4C5H5163.9°59.9°
C3C4C5H5245.6°60.0°
C4C3O3HO364.9°60.0°
C3C4O4HO452.7°60.1°
O3C3C4C518.0°54.3°
O3C3C4O4136.8°174.4°
O3C3C4H4105.6°65.7°
H3C3C4C596.4°65.6°
H3C3C4O422.4°54.4°
H3C3C4H4140.0°174.4°
H3C3O3HO3178.7°180.0°
C5C4O4H4118.3°119.9°
C4C5O5H51125.2°120.1°
C4C5O5H52125.3°120.1°
C4C5H51H52118.1°120.0°
C5C4O4HO471.4°60.1°
C4C5O5P2114.7°180.0°
O4C4C5O553.0°59.9°
O4C4C5H51178.2°180.0°
O4C4C5H5272.2°60.1°
H4C4C5O565.5°60.0°
H4C4C5H5159.8°60.1°
H4C4C5H52169.3°180.0°
H4C4O4HO4170.3°180.0°
O5C5H51H52118.0°119.9°
C5O5P2O4P46.1°60.0°
C5O5P2O5P175.4°180.0°
C5O5P2O6P69.1°60.0°
H51C5O5P2120.0°59.9°
H52C5O5P210.5°59.9°
O6CO7HO72.0°0.1°
O1P1O1PO2P121.7°120.1°
O1P1O1PO3P109.9°119.9°
O1P1O2PO3P110.3°120.0°
O1P1O2PHOP2179.9°180.0°
O1P1O3PHOP3180.0°60.1°
O5P2O4PO5P121.6°120.0°
O5P2O4PO6P109.3°120.0°
O5P2O5PO6P109.0°120.0°
O5P2O5PHOP5180.0°180.0°
O5P2O6PHOP6180.0°60.0°
O1PP1O2PO3P129.1°120.0°
O1PP1O2PHOP259.4°60.0°
O1PP1O3PHOP367.8°180.0°
O2PP1O3PHOP365.9°60.0°
O3PP1O2PHOP269.8°60.0°
O4PP2O5PO6P128.7°120.0°
O4PP2O5PHOP557.7°60.0°
O4PP2O6PHOP666.3°180.0°
O5PP2O6PHOP667.5°60.0°
O6PP2O5PHOP571.1°60.0°

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon