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SummaryGeometryRelated PDB entries

C8O

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
OAGNAAsing1.22Å1.28Å
CAJCAKdoub1.38Å1.38ÅAromatic
CAJCADsing1.39Å1.39ÅAromatic
CAKCAFsing1.39Å1.37ÅAromatic
CAONALsing1.46Å1.50Å
CAOCAPsing1.53Å1.54Å
NAACADsing1.48Å1.36Å
NAAOAHdoub1.22Å1.30Å
CADCACdoub1.38Å1.37ÅAromatic
CAFNALsing1.39Å1.36Å
CAFCABdoub1.40Å1.41ÅAromatic
CACCABsing1.40Å1.41ÅAromatic
CABCAEsing1.47Å1.42Å
CAPNANsing1.47Å1.49Å
CAEOAMdoub1.22Å1.27Å
CAEOAIsing1.35Å1.25Å
OAIH1sing0.97Å0.95Å
CACH2sing1.08Å1.08Å
CAJH3sing1.08Å1.08Å
CAKH4sing1.08Å1.08Å
NALH5sing0.97Å1.00Å
CAOH6sing1.09Å1.10Å
CAOH7sing1.09Å1.10Å
CAPH8sing1.09Å1.10Å
CAPH9sing1.09Å1.10Å
NANH10sing1.01Å1.00Å
NANH11sing1.01Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
OAGNAACAD118.7°120.0°
OAGNAAOAH117.8°120.0°
CAKCAJCAD122.4°120.4°
CAJCAKCAF121.0°120.1°
CAKCAJH3118.8°119.8°
CAJCAKH4119.5°120.0°
CAJCADNAA118.8°119.8°
CAJCADCAC117.1°120.4°
CADCAJH3118.8°119.8°
CAKCAFNAL121.9°120.1°
CAKCAFCAB118.1°119.6°
CAFCAKH4119.5°120.0°
NALCAOCAP114.3°109.5°
CAONALCAF125.6°120.0°
CAONALH5105.3°120.0°
NALCAOH6108.2°109.5°
NALCAOH7108.3°109.5°
CAOCAPNAN105.7°109.5°
CAPCAOH6108.2°109.4°
CAPCAOH7108.3°109.5°
CAOCAPH8110.4°109.5°
CAOCAPH9110.4°109.5°
CADNAAOAH123.4°120.0°
NAACADCAC124.1°119.8°
CADCACCAB122.0°119.9°
CADCACH2119.0°120.1°
NALCAFCAB120.0°120.2°
CAFNALH5105.3°119.9°
CAFCABCAC119.4°119.6°
CAFCABCAE123.2°120.2°
CACCABCAE117.3°120.2°
CABCACH2119.0°120.0°
CABCAEOAM120.5°120.0°
CABCAEOAI120.4°120.0°
NANCAPH8110.4°109.4°
NANCAPH9110.4°109.5°
CAPNANH10109.5°111.0°
CAPNANH11109.4°111.0°
OAMCAEOAI119.1°120.0°
CAEOAIH1109.5°117.0°
H6CAOH7109.5°109.5°
H8CAPH9109.5°109.5°
H10NANH11109.5°111.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
OAGNAACADCAJ15.6°0.0°
OAGNAACADOAH175.7°180.0°
OAGNAACADCAC164.4°180.0°
CAKCAJCADH3180.0°179.7°
CAJCAKCAFH4180.0°179.7°
CAKCAJCADNAA179.5°180.0°
CAKCAJCADCAC0.5°0.0°
CAJCAKCAFNAL179.6°180.0°
CAJCAKCAFCAB0.7°0.5°
CADCAJCAKCAF0.3°0.3°
CAJCADNAACAC180.0°180.0°
CAJCADNAAOAH160.2°180.0°
CAJCADCACCAB0.8°0.0°
CAJCADCACH2179.1°180.0°
CADCAJCAKH4179.7°180.0°
CAKCAFNALCAO11.4°5.6°
CAKCAFNALCAB179.7°179.5°
CAKCAFCABCAC0.4°0.5°
CAKCAFCABCAE179.3°179.8°
CAFCAKCAJH3179.7°180.0°
CAKCAFNALH5110.8°174.5°
NALCAOCAPH6120.7°120.0°
NALCAOCAPH7120.7°120.0°
CAONALCAFH5122.2°180.0°
CAONALCAFCAB168.9°175.0°
NALCAOCAPNAN86.9°180.0°
NALCAOH6H7117.8°120.0°
NALCAOCAPH832.5°60.0°
NALCAOCAPH9153.7°60.0°
CAPCAONALCAF134.7°180.0°
CAOCAPNANH8119.4°120.0°
CAOCAPNANH9119.4°120.1°
CAPCAONALH5103.1°0.0°
CAPCAOH6H7117.8°120.0°
CAOCAPH8H9121.7°120.1°
CAOCAPNANH10180.0°56.0°
CAOCAPNANH1160.0°180.0°
NAACADCACCAB179.2°180.0°
NAACADCACH20.8°0.0°
NAACADCAJH30.5°0.3°
OAHNAACADCAC19.9°0.0°
CADCACCABCAF0.4°0.3°
CADCACCABH2180.0°180.0°
CADCACCABCAE179.9°180.0°
CACCADCAJH3179.5°179.7°
NALCAFCABCAC179.9°180.0°
NALCAFCABCAE0.4°0.3°
NALCAFCAKH40.4°0.3°
CAFNALCAOH6104.6°60.0°
CAFNALCAOH714.0°59.9°
CAFCABCACCAE179.7°179.7°
CAFCABCAEOAM162.7°6.1°
CAFCABCAEOAI18.6°173.8°
CAFCABCACH2179.6°179.7°
CABCAFCAKH4179.3°179.7°
CABCAFNALH568.9°5.0°
CACCABCAEOAM17.0°174.2°
CACCABCAEOAI161.7°5.9°
CABCAEOAMOAI178.7°179.9°
CABCAEOAIH1178.7°180.0°
CAECABCACH20.1°0.1°
NANCAPCAOH6152.4°60.0°
NANCAPCAOH733.8°59.9°
NANCAPH8H9121.7°120.0°
CAPNANH10H11120.0°124.0°
OAMCAEOAIH10.0°0.1°
H3CAJCAKH40.3°0.3°
H5NALCAOH617.6°120.0°
H5NALCAOH7136.2°120.0°
H6CAOCAPH888.2°180.0°
H6CAOCAPH933.0°60.0°
H7CAOCAPH8153.2°60.0°
H7CAOCAPH985.6°180.0°
H8CAPNANH1060.6°64.0°
H8CAPNANH11179.4°60.0°
H9CAPNANH1060.6°176.1°
H9CAPNANH1159.4°60.0°

248636

PDB entries from 2026-02-04

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