C6T
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| O2 | C2 | doub | 1.22Å | 1.21Å | |
| C2 | N3 | sing | 1.35Å | 1.33Å | |
| C2 | N1 | sing | 1.35Å | 1.33Å | |
| N3 | C4 | sing | 1.35Å | 1.35Å | |
| C2' | C1' | sing | 1.54Å | 1.31Å | |
| C2' | C3' | sing | 1.55Å | 1.53Å | |
| C1' | N1 | sing | 1.47Å | 1.45Å | |
| C1' | O4' | sing | 1.44Å | 1.59Å | |
| N1 | C6 | sing | 1.37Å | 1.34Å | |
| O3' | C3' | sing | 1.43Å | 1.40Å | |
| C4 | O4 | doub | 1.22Å | 1.39Å | |
| C4 | C5 | sing | 1.42Å | 1.40Å | |
| C3' | C4' | sing | 1.55Å | 1.54Å | |
| O4' | C4' | sing | 1.44Å | 1.29Å | |
| C6 | C5 | doub | 1.35Å | 1.41Å | |
| C4' | C5' | sing | 1.53Å | 1.57Å | |
| C5 | C7 | sing | 1.51Å | 1.53Å | |
| O1B | PB | doub | 1.48Å | 1.60Å | |
| C5' | O5' | sing | 1.43Å | 1.43Å | |
| O5' | PA | sing | 1.61Å | 1.59Å | |
| PB | N3A | sing | 1.68Å | 1.69Å | |
| PB | O2B | sing | 1.61Å | 1.57Å | |
| PB | C3B | sing | 1.82Å | 1.83Å | |
| N3A | PA | sing | 1.68Å | 1.68Å | |
| C3B | PG | sing | 1.82Å | 1.83Å | |
| PA | O2A | doub | 1.48Å | 1.51Å | |
| PA | O1A | sing | 1.61Å | 1.52Å | |
| PG | O2G | doub | 1.48Å | 1.50Å | |
| PG | O3G | sing | 1.61Å | 1.52Å | |
| PG | O1G | sing | 1.61Å | 1.51Å | |
| C7 | H1 | sing | 1.09Å | 1.10Å | |
| C7 | H2 | sing | 1.09Å | 1.10Å | |
| C7 | H3 | sing | 1.09Å | 1.10Å | |
| C6 | H4 | sing | 1.08Å | 1.08Å | |
| N3 | H5 | sing | 0.97Å | 1.00Å | |
| C1' | H6 | sing | 1.09Å | 1.10Å | |
| C2' | H7 | sing | 1.09Å | 1.10Å | |
| C2' | H8 | sing | 1.09Å | 1.10Å | |
| C3' | H9 | sing | 1.09Å | 1.10Å | |
| O3' | H10 | sing | 0.97Å | 0.95Å | |
| C4' | H11 | sing | 1.09Å | 1.10Å | |
| C5' | H12 | sing | 1.09Å | 1.10Å | |
| C5' | H13 | sing | 1.09Å | 1.10Å | |
| O1A | H14 | sing | 0.97Å | 0.95Å | |
| N3A | H15 | sing | 1.01Å | 1.00Å | |
| O2B | H16 | sing | 0.97Å | 0.95Å | |
| C3B | H17 | sing | 1.09Å | 1.10Å | |
| C3B | H18 | sing | 1.09Å | 1.10Å | |
| O1G | H19 | sing | 0.97Å | 0.95Å | |
| O3G | H20 | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O2 | C2 | N3 | 118.0° | 119.5° |
| O2 | C2 | N1 | 118.3° | 119.5° |
| N3 | C2 | N1 | 123.7° | 120.9° |
| C2 | N3 | C4 | 118.2° | 120.2° |
| C2 | N3 | H5 | 120.9° | 119.9° |
| C2 | N1 | C1' | 120.7° | 119.7° |
| C2 | N1 | C6 | 120.5° | 120.6° |
| N3 | C4 | O4 | 120.3° | 120.3° |
| N3 | C4 | C5 | 121.4° | 119.4° |
| C4 | N3 | H5 | 120.9° | 119.8° |
| C1' | C2' | C3' | 107.2° | 104.1° |
| C2' | C1' | N1 | 108.8° | 110.4° |
| C2' | C1' | O4' | 104.9° | 104.8° |
| C2' | C1' | H6 | 113.2° | 110.5° |
| C1' | C2' | H7 | 110.0° | 110.5° |
| C1' | C2' | H8 | 110.0° | 110.5° |
| C2' | C3' | O3' | 114.8° | 110.5° |
| C2' | C3' | C4' | 99.0° | 104.1° |
| C3' | C2' | H7 | 110.0° | 110.5° |
| C3' | C2' | H8 | 110.0° | 110.5° |
| C2' | C3' | H9 | 108.6° | 110.5° |
| N1 | C1' | O4' | 110.0° | 110.3° |
| C1' | N1 | C6 | 118.7° | 119.7° |
| N1 | C1' | H6 | 110.8° | 110.3° |
| C1' | O4' | C4' | 108.1° | 105.3° |
| O4' | C1' | H6 | 108.9° | 110.4° |
| N1 | C6 | C5 | 119.3° | 119.7° |
| N1 | C6 | H4 | 120.4° | 120.1° |
| O3' | C3' | C4' | 114.9° | 110.5° |
| O3' | C3' | H9 | 110.4° | 110.6° |
| C3' | O3' | H10 | 109.5° | 113.9° |
| O4 | C4 | C5 | 118.2° | 120.3° |
| C4 | C5 | C6 | 116.9° | 119.1° |
| C4 | C5 | C7 | 121.7° | 120.4° |
| C3' | C4' | O4' | 103.8° | 104.8° |
| C3' | C4' | C5' | 111.4° | 110.4° |
| C4' | C3' | H9 | 108.5° | 110.5° |
| C3' | C4' | H11 | 109.2° | 110.4° |
| O4' | C4' | C5' | 110.7° | 110.4° |
| O4' | C4' | H11 | 113.0° | 110.3° |
| C6 | C5 | C7 | 121.4° | 120.4° |
| C5 | C6 | H4 | 120.4° | 120.2° |
| C4' | C5' | O5' | 107.8° | 109.4° |
| C5' | C4' | H11 | 108.7° | 110.4° |
| C4' | C5' | H12 | 109.9° | 109.5° |
| C4' | C5' | H13 | 109.9° | 109.5° |
| C5 | C7 | H1 | 109.5° | 109.5° |
| C5 | C7 | H2 | 109.5° | 109.5° |
| C5 | C7 | H3 | 109.5° | 109.4° |
| O1B | PB | N3A | 106.7° | 109.5° |
| O1B | PB | O2B | 114.0° | 109.5° |
| O1B | PB | C3B | 106.3° | 109.5° |
| C5' | O5' | PA | 118.5° | 123.0° |
| O5' | C5' | H12 | 109.9° | 109.5° |
| O5' | C5' | H13 | 109.9° | 109.4° |
| O5' | PA | N3A | 107.2° | 109.5° |
| O5' | PA | O2A | 107.5° | 109.5° |
| O5' | PA | O1A | 107.0° | 109.5° |
| N3A | PB | O2B | 112.2° | 109.4° |
| N3A | PB | C3B | 107.9° | 109.5° |
| PB | N3A | PA | 127.5° | 111.0° |
| PB | N3A | H15 | 104.8° | 111.0° |
| O2B | PB | C3B | 109.4° | 109.5° |
| PB | O2B | H16 | 109.5° | 114.0° |
| PB | C3B | PG | 115.9° | 109.5° |
| PB | C3B | H17 | 107.8° | 109.5° |
| PB | C3B | H18 | 107.8° | 109.4° |
| N3A | PA | O2A | 111.4° | 109.5° |
| N3A | PA | O1A | 112.1° | 109.5° |
| PA | N3A | H15 | 104.8° | 111.0° |
| C3B | PG | O2G | 107.6° | 109.5° |
| C3B | PG | O3G | 105.5° | 109.5° |
| C3B | PG | O1G | 111.9° | 109.5° |
| PG | C3B | H17 | 107.8° | 109.5° |
| PG | C3B | H18 | 107.8° | 109.5° |
| O2A | PA | O1A | 111.4° | 109.5° |
| PA | O1A | H14 | 109.5° | 114.1° |
| O2G | PG | O3G | 110.0° | 109.4° |
| O2G | PG | O1G | 109.5° | 109.4° |
| O3G | PG | O1G | 112.1° | 109.5° |
| PG | O3G | H20 | 109.5° | 114.0° |
| PG | O1G | H19 | 109.5° | 114.0° |
| H1 | C7 | H2 | 109.5° | 109.5° |
| H1 | C7 | H3 | 109.5° | 109.5° |
| H2 | C7 | H3 | 109.4° | 109.4° |
| H7 | C2' | H8 | 109.5° | 110.6° |
| H12 | C5' | H13 | 109.5° | 109.5° |
| H17 | C3B | H18 | 109.5° | 109.5° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O2 | C2 | N3 | N1 | 179.6° | 179.9° |
| O2 | C2 | N3 | C4 | 179.2° | 179.9° |
| O2 | C2 | N1 | C1' | 2.2° | 0.0° |
| O2 | C2 | N1 | C6 | 178.9° | 179.7° |
| O2 | C2 | N3 | H5 | 0.7° | 0.1° |
| C2 | N3 | C4 | H5 | 180.0° | 180.0° |
| N3 | C2 | N1 | C1' | 177.4° | 180.0° |
| N3 | C2 | N1 | C6 | 0.7° | 0.2° |
| C2 | N3 | C4 | O4 | 179.2° | 180.0° |
| C2 | N3 | C4 | C5 | 0.7° | 0.3° |
| N1 | C2 | N3 | C4 | 0.4° | 0.0° |
| C2 | N1 | C1' | C2' | 94.4° | 61.8° |
| C2 | N1 | C1' | C6 | 176.8° | 179.7° |
| C2 | N1 | C1' | O4' | 151.2° | 53.5° |
| C2 | N1 | C6 | C5 | 1.3° | 0.2° |
| C2 | N1 | C6 | H4 | 178.8° | 179.7° |
| N1 | C2 | N3 | H5 | 179.7° | 180.0° |
| C2 | N1 | C1' | H6 | 30.7° | 175.8° |
| N3 | C4 | O4 | C5 | 179.9° | 179.7° |
| N3 | C4 | C5 | C6 | 1.3° | 0.2° |
| N3 | C4 | C5 | C7 | 179.5° | 179.7° |
| C1' | C2' | C3' | H7 | 119.6° | 118.6° |
| C1' | C2' | C3' | H8 | 119.6° | 118.6° |
| C2' | C1' | N1 | O4' | 114.4° | 115.4° |
| C2' | C1' | N1 | H6 | 125.1° | 122.4° |
| C2' | C1' | O4' | H6 | 121.5° | 119.0° |
| C2' | C1' | N1 | C6 | 82.4° | 117.9° |
| C1' | C2' | C3' | O3' | 159.2° | 118.6° |
| C1' | C2' | C3' | C4' | 36.4° | 0.0° |
| C2' | C1' | O4' | C4' | 7.2° | 40.5° |
| C1' | C2' | H7 | H8 | 121.0° | 122.7° |
| C1' | C2' | C3' | H9 | 76.8° | 118.7° |
| C3' | C2' | C1' | N1 | 98.0° | 142.8° |
| C3' | C2' | C1' | O4' | 19.7° | 24.0° |
| C2' | C3' | O3' | C4' | 113.8° | 114.6° |
| C2' | C3' | O3' | H9 | 123.1° | 122.7° |
| C2' | C3' | C4' | H9 | 113.2° | 118.7° |
| C2' | C3' | C4' | O4' | 40.1° | 24.0° |
| C2' | C3' | C4' | C5' | 159.3° | 142.8° |
| C3' | C2' | C1' | H6 | 138.4° | 94.9° |
| C3' | C2' | H7 | H8 | 121.1° | 122.7° |
| C2' | C3' | O3' | H10 | 140.9° | 61.5° |
| C2' | C3' | C4' | H11 | 80.6° | 94.8° |
| N1 | C1' | O4' | H6 | 121.6° | 122.2° |
| N1 | C1' | O4' | C4' | 124.1° | 159.3° |
| C1' | N1 | C6 | C5 | 178.1° | 180.0° |
| C1' | N1 | C6 | H4 | 1.9° | 0.0° |
| N1 | C1' | C2' | H7 | 142.4° | 98.6° |
| N1 | C1' | C2' | H8 | 21.7° | 24.2° |
| O4' | C1' | N1 | C6 | 32.0° | 126.7° |
| C1' | O4' | C4' | C3' | 30.1° | 40.5° |
| C1' | O4' | C4' | C5' | 149.7° | 159.3° |
| O4' | C1' | C2' | H7 | 99.9° | 142.6° |
| O4' | C1' | C2' | H8 | 139.4° | 94.6° |
| C1' | O4' | C4' | H11 | 88.0° | 78.3° |
| N1 | C6 | C5 | C4 | 1.5° | 0.0° |
| N1 | C6 | C5 | H4 | 180.0° | 180.0° |
| N1 | C6 | C5 | C7 | 179.8° | 179.9° |
| C6 | N1 | C1' | H6 | 152.5° | 4.5° |
| O3' | C3' | C4' | H9 | 124.1° | 122.7° |
| O3' | C3' | C4' | O4' | 162.8° | 142.6° |
| O3' | C3' | C4' | C5' | 78.0° | 98.5° |
| O3' | C3' | C2' | H7 | 39.5° | 0.0° |
| O3' | C3' | C2' | H8 | 81.2° | 122.8° |
| O3' | C3' | C4' | H11 | 42.1° | 23.8° |
| O4 | C4 | C5 | C6 | 178.6° | 180.0° |
| O4 | C4 | C5 | C7 | 0.4° | 0.0° |
| O4 | C4 | N3 | H5 | 0.8° | 0.1° |
| C4 | C5 | C6 | C7 | 178.2° | 179.9° |
| C4 | C5 | C7 | H1 | 180.0° | 0.0° |
| C4 | C5 | C7 | H2 | 60.0° | 120.0° |
| C4 | C5 | C7 | H3 | 60.0° | 120.1° |
| C4 | C5 | C6 | H4 | 178.5° | 180.0° |
| C5 | C4 | N3 | H5 | 179.3° | 179.8° |
| C3' | C4' | O4' | C5' | 119.6° | 118.8° |
| C3' | C4' | O4' | H11 | 118.1° | 118.8° |
| C3' | C4' | C5' | H11 | 120.4° | 122.3° |
| C3' | C4' | C5' | O5' | 66.3° | 175.0° |
| C4' | C3' | C2' | H7 | 83.3° | 118.7° |
| C4' | C3' | C2' | H8 | 156.0° | 118.6° |
| C4' | C3' | O3' | H10 | 105.3° | 176.1° |
| C3' | C4' | C5' | H12 | 174.0° | 55.0° |
| C3' | C4' | C5' | H13 | 53.5° | 65.1° |
| O4' | C4' | C5' | H11 | 124.7° | 122.3° |
| O4' | C4' | C5' | O5' | 48.7° | 69.6° |
| C4' | O4' | C1' | H6 | 114.3° | 78.4° |
| O4' | C4' | C3' | H9 | 73.1° | 94.7° |
| O4' | C4' | C5' | H12 | 71.1° | 170.4° |
| O4' | C4' | C5' | H13 | 168.4° | 50.3° |
| C6 | C5 | C7 | H1 | 1.8° | 180.0° |
| C6 | C5 | C7 | H2 | 118.2° | 59.9° |
| C6 | C5 | C7 | H3 | 121.9° | 60.0° |
| C4' | C5' | O5' | H12 | 119.8° | 120.0° |
| C4' | C5' | O5' | H13 | 119.7° | 119.9° |
| C4' | C5' | O5' | PA | 133.0° | 180.0° |
| C5' | C4' | C3' | H9 | 46.1° | 24.2° |
| C4' | C5' | H12 | H13 | 120.7° | 120.0° |
| C5 | C7 | H1 | H2 | 120.0° | 120.0° |
| C5 | C7 | H1 | H3 | 120.0° | 120.0° |
| C5 | C7 | H2 | H3 | 120.0° | 119.9° |
| C7 | C5 | C6 | H4 | 0.2° | 0.0° |
| O1B | PB | N3A | O2B | 125.5° | 120.0° |
| O1B | PB | N3A | C3B | 113.9° | 120.0° |
| O1B | PB | O2B | C3B | 118.9° | 120.0° |
| O1B | PB | N3A | PA | 138.5° | 60.0° |
| O1B | PB | C3B | PG | 154.0° | 60.0° |
| O1B | PB | N3A | H15 | 99.1° | 176.0° |
| O1B | PB | O2B | H16 | 0.0° | 180.0° |
| O1B | PB | C3B | H17 | 33.1° | 60.0° |
| O1B | PB | C3B | H18 | 85.0° | 180.0° |
| C5' | O5' | PA | N3A | 66.6° | 70.0° |
| C5' | O5' | PA | O2A | 173.5° | 50.0° |
| C5' | O5' | PA | O1A | 53.8° | 170.1° |
| O5' | C5' | C4' | H11 | 173.4° | 52.7° |
| O5' | C5' | H12 | H13 | 120.8° | 120.0° |
| O5' | PA | N3A | PB | 103.2° | 180.0° |
| O5' | PA | N3A | O2A | 117.3° | 120.0° |
| O5' | PA | N3A | O1A | 117.1° | 120.0° |
| O5' | PA | O2A | O1A | 116.9° | 120.0° |
| PA | O5' | C5' | H12 | 107.3° | 60.0° |
| PA | O5' | C5' | H13 | 13.2° | 60.1° |
| O5' | PA | O1A | H14 | 117.2° | 60.0° |
| O5' | PA | N3A | H15 | 134.4° | 56.0° |
| N3A | PB | O2B | C3B | 119.7° | 120.0° |
| PB | N3A | PA | H15 | 122.4° | 124.0° |
| N3A | PB | C3B | PG | 91.8° | 180.0° |
| PB | N3A | PA | O2A | 139.5° | 60.0° |
| PB | N3A | PA | O1A | 13.9° | 60.0° |
| N3A | PB | O2B | H16 | 121.4° | 60.0° |
| N3A | PB | C3B | H17 | 147.2° | 60.0° |
| N3A | PB | C3B | H18 | 29.1° | 60.0° |
| O2B | PB | N3A | PA | 13.0° | 60.0° |
| O2B | PB | C3B | PG | 30.5° | 60.0° |
| O2B | PB | N3A | H15 | 135.3° | 64.0° |
| O2B | PB | C3B | H17 | 90.4° | 180.0° |
| O2B | PB | C3B | H18 | 151.4° | 60.0° |
| C3B | PB | N3A | PA | 107.6° | 180.0° |
| PB | C3B | PG | H17 | 120.9° | 120.0° |
| PB | C3B | PG | H18 | 120.9° | 120.0° |
| PB | C3B | PG | O2G | 93.5° | 60.0° |
| PB | C3B | PG | O3G | 24.0° | 180.0° |
| PB | C3B | PG | O1G | 146.2° | 60.0° |
| C3B | PB | N3A | H15 | 14.8° | 56.0° |
| C3B | PB | O2B | H16 | 118.8° | 60.0° |
| PB | C3B | H17 | H18 | 117.1° | 120.0° |
| N3A | PA | O2A | O1A | 126.0° | 120.0° |
| N3A | PA | O1A | H14 | 125.6° | 60.0° |
| C3B | PG | O2G | O3G | 114.5° | 120.0° |
| C3B | PG | O2G | O1G | 121.8° | 120.0° |
| C3B | PG | O3G | O1G | 122.1° | 120.0° |
| PG | C3B | H17 | H18 | 117.1° | 120.0° |
| C3B | PG | O1G | H19 | 119.2° | 59.9° |
| C3B | PG | O3G | H20 | 115.8° | 180.0° |
| O2A | PA | O1A | H14 | 0.0° | 180.0° |
| O2A | PA | N3A | H15 | 17.1° | 64.0° |
| O1A | PA | N3A | H15 | 108.4° | 176.0° |
| O2G | PG | O3G | O1G | 122.1° | 119.9° |
| O2G | PG | C3B | H17 | 27.4° | 180.0° |
| O2G | PG | C3B | H18 | 145.6° | 60.0° |
| O2G | PG | O1G | H19 | 0.0° | 180.0° |
| O2G | PG | O3G | H20 | 0.0° | 60.0° |
| O3G | PG | C3B | H17 | 144.9° | 60.0° |
| O3G | PG | C3B | H18 | 97.0° | 60.0° |
| O3G | PG | O1G | H19 | 122.4° | 60.1° |
| O1G | PG | C3B | H17 | 92.9° | 60.0° |
| O1G | PG | C3B | H18 | 25.3° | 180.0° |
| O1G | PG | O3G | H20 | 122.1° | 60.0° |
| H1 | C7 | H2 | H3 | 120.0° | 120.0° |
| H6 | C1' | C2' | H7 | 18.8° | 23.7° |
| H6 | C1' | C2' | H8 | 101.9° | 146.5° |
| H7 | C2' | C3' | H9 | 163.6° | 122.7° |
| H8 | C2' | C3' | H9 | 42.9° | 0.0° |
| H9 | C3' | O3' | H10 | 17.8° | 61.3° |
| H9 | C3' | C4' | H11 | 166.2° | 146.5° |
| H11 | C4' | C5' | H12 | 53.6° | 67.3° |
| H11 | C4' | C5' | H13 | 66.9° | 172.6° |
