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SummaryGeometryRelated PDB entries

C5W

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
O10C09doub1.21Å1.23Å
C35C33sing1.53Å1.52Å
C09C08sing1.47Å1.47Å
C33C34sing1.53Å1.53Å
C33N30sing1.47Å1.48Å
C31N30sing1.47Å1.47Å
C31C32sing1.53Å1.51Å
C08C07doub1.40Å1.39ÅAromatic
C08C03sing1.40Å1.42ÅAromatic
O02C03sing1.35Å1.35Å
O02C01sing1.43Å1.43Å
N30C29sing1.47Å1.48Å
C07C06sing1.40Å1.39ÅAromatic
C03N04doub1.32Å1.33ÅAromatic
C32N27sing1.47Å1.46Å
C29C28sing1.53Å1.52Å
N27C28sing1.47Å1.47Å
N27C26sing1.47Å1.46Å
C06C19sing1.48Å1.47Å
C06C05doub1.39Å1.38ÅAromatic
N04C05sing1.32Å1.34ÅAromatic
C24N23sing1.34Å1.38ÅAromatic
C24C25doub1.35Å1.34ÅAromatic
N23C22doub1.31Å1.30ÅAromatic
C20C19sing1.40Å1.40ÅAromatic
C20C21doub1.38Å1.39ÅAromatic
C19C42doub1.38Å1.40ÅAromatic
C25O36sing1.35Å1.38ÅAromatic
C25C26sing1.51Å1.49Å
C22O36sing1.34Å1.36ÅAromatic
C22C21sing1.47Å1.47Å
C21C37sing1.47Å1.40ÅAromatic
C42C41sing1.41Å1.39ÅAromatic
C37C41sing1.47Å1.40ÅAromatic
C37C38doub1.38Å1.41ÅAromatic
C41N40doub1.32Å1.38ÅAromatic
C38N39sing1.34Å1.32ÅAromatic
N40N39sing1.40Å1.36ÅAromatic
C20H1sing1.08Å1.08Å
C24H2sing1.08Å1.08Å
C26H3sing1.09Å1.10Å
C26H4sing1.09Å1.10Å
C28H5sing1.09Å1.10Å
C28H6sing1.09Å1.10Å
C29H7sing1.09Å1.10Å
C29H8sing1.09Å1.10Å
C35H10sing1.09Å1.10Å
C35H11sing1.09Å1.10Å
C35H12sing1.09Å1.10Å
C01H13sing1.09Å1.10Å
C01H14sing1.09Å1.10Å
C01H15sing1.09Å1.10Å
C05H16sing1.08Å1.08Å
C07H17sing1.08Å1.08Å
C34H18sing1.09Å1.10Å
C34H19sing1.09Å1.10Å
C34H20sing1.09Å1.10Å
C33H21sing1.09Å1.10Å
N39H22sing0.97Å1.00Å
C38H23sing1.08Å1.08Å
C31H24sing1.09Å1.10Å
C31H25sing1.09Å1.10Å
C32H26sing1.09Å1.10Å
C32H27sing1.09Å1.10Å
C42H30sing1.08Å1.08Å
C09O1sing1.35Å1.34Å
O1H9sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
O10C09C08121.5°120.0°
O10C09O1120.8°120.1°
C35C33C34110.4°109.5°
C35C33N30111.4°109.4°
C33C35H10109.5°109.4°
C33C35H11109.4°109.5°
C33C35H12109.5°109.5°
C35C33H21106.7°109.5°
C09C08C07118.5°120.5°
C09C08C03124.5°120.5°
C08C09O1117.7°120.0°
C34C33N30114.1°109.4°
C33C34H18109.5°109.5°
C33C34H19109.5°109.5°
C33C34H20109.5°109.5°
C34C33H21106.6°109.5°
C33N30C31109.3°111.0°
C33N30C29114.6°110.9°
N30C33H21107.2°109.4°
N30C31C32110.9°109.4°
C31N30C29110.8°110.9°
N30C31H24109.1°109.5°
N30C31H25109.1°109.5°
C31C32N27110.4°109.4°
C32C31H24109.1°109.5°
C32C31H25109.1°109.5°
C31C32H26109.3°109.5°
C31C32H27109.3°109.5°
C07C08C03117.0°119.0°
C08C07C06120.9°118.2°
C08C07H17119.5°120.9°
C08C03O02117.3°119.7°
C08C03N04122.5°120.6°
C03O02C01117.8°117.0°
O02C03N04120.1°119.7°
O02C01H13109.5°109.4°
O02C01H14109.5°109.5°
O02C01H15109.5°109.5°
N30C29C28111.2°109.3°
N30C29H7109.0°109.5°
N30C29H8109.1°109.5°
C07C06C19118.1°120.4°
C07C06C05117.2°119.2°
C06C07H17119.6°120.9°
C03N04C05118.8°121.9°
C32N27C28108.8°110.9°
C32N27C26111.8°111.0°
N27C32H26109.2°109.4°
N27C32H27109.2°109.5°
C29C28N27110.1°109.3°
C29C28H5109.3°109.5°
C29C28H6109.3°109.5°
C28C29H7109.1°109.4°
C28C29H8109.0°109.5°
C28N27C26111.2°111.0°
N27C28H5109.3°109.5°
N27C28H6109.3°109.5°
N27C26C25116.5°109.5°
N27C26H3107.7°109.4°
N27C26H4107.7°109.5°
C19C06C05124.6°120.4°
C06C19C20118.2°118.9°
C06C19C42121.4°118.9°
C06C05N04123.7°121.0°
C06C05H16118.2°119.5°
N04C05H16118.2°119.5°
N23C24C25110.5°107.9°
C24N23C22104.5°108.6°
N23C24H2124.8°126.0°
C24C25O36106.7°107.3°
C24C25C26135.5°126.3°
C25C24H2124.8°126.1°
N23C22O36113.4°108.5°
N23C22C21127.3°125.7°
C19C20C21121.6°121.2°
C20C19C42120.4°122.2°
C19C20H1119.2°119.4°
C20C21C22117.6°120.6°
C20C21C37117.7°118.8°
C21C20H1119.2°119.4°
C19C42C41118.4°120.4°
C19C42H30120.8°119.8°
O36C25C26117.1°126.4°
C25O36C22104.8°107.7°
C25C26H3107.7°109.5°
C25C26H4107.7°109.5°
O36C22C21119.2°125.7°
C22C21C37124.7°120.6°
C21C37C41120.8°118.6°
C21C37C38133.5°134.8°
C42C41C37121.1°118.8°
C42C41N40133.5°134.5°
C41C42H30120.8°119.8°
C41C37C38105.7°106.6°
C37C41N40105.4°106.7°
C37C38N39110.9°108.0°
C37C38H23124.5°126.0°
C41N40N39111.6°108.9°
C38N39N40106.4°109.8°
C38N39H22126.8°125.0°
N39C38H23124.6°126.1°
N40N39H22126.8°125.2°
H3C26H4109.5°109.5°
H5C28H6109.4°109.5°
H7C29H8109.5°109.5°
H10C35H11109.5°109.5°
H10C35H12109.5°109.5°
H11C35H12109.5°109.5°
H13C01H14109.5°109.4°
H13C01H15109.5°109.5°
H14C01H15109.5°109.5°
H18C34H19109.5°109.5°
H18C34H20109.4°109.4°
H19C34H20109.5°109.5°
H24C31H25109.5°109.5°
H26C32H27109.5°109.5°
C09O1H9109.5°117.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
O10C09C08O1178.9°180.0°
O10C09C08C077.7°180.0°
O10C09C08C03175.5°0.0°
O10C09O1H90.0°0.1°
C35C33C34N30126.4°120.0°
C35C33C34H21115.5°120.1°
C35C33N30H21116.4°120.0°
C35C33N30C3172.6°56.2°
C35C33N30C29162.3°180.0°
C33C35H10H11120.0°120.0°
C33C35H10H12120.0°120.0°
C33C35H11H12120.0°120.0°
C35C33C34H18180.0°60.1°
C35C33C34H1960.0°60.0°
C35C33C34H2060.0°180.0°
C09C08C07C03177.0°180.0°
C09C08C03O020.3°0.0°
C09C08C07C06176.6°180.0°
C09C08C03N04176.9°179.7°
C09C08C07H173.5°0.0°
C08C09O1H9178.9°180.0°
C34C33N30H21117.7°120.0°
C34C33N30C31161.5°176.2°
C34C33N30C2936.4°60.0°
C34C33C35H10180.0°60.0°
C34C33C35H1160.0°180.0°
C34C33C35H1260.0°60.0°
C33C34H18H19120.0°120.1°
C33C34H18H20120.0°120.0°
C33C34H19H20120.0°120.1°
C33N30C31C29127.3°123.8°
C33N30C31C32178.4°176.8°
C33N30C29C28178.3°176.8°
C33N30C29H758.1°56.9°
C33N30C29H861.4°63.2°
N30C33C35H1052.1°180.0°
N30C33C35H1167.9°60.0°
N30C33C35H12172.1°60.0°
N30C33C34H1853.6°180.0°
N30C33C34H19173.6°60.0°
N30C33C34H2066.4°60.1°
C33N30C31H2458.2°56.9°
C33N30C31H2561.4°63.2°
N30C31C32H24120.2°120.0°
N30C31C32H25120.2°119.9°
N30C31C32N2758.5°58.4°
C31N30C29C2854.0°59.4°
C31N30C29H766.3°179.3°
C31N30C29H8174.3°60.6°
C31N30C33H2143.8°63.8°
N30C31H24H25119.4°120.1°
N30C31C32H2661.6°61.6°
N30C31C32H27178.7°178.3°
C32C31N30C2954.3°59.3°
C31C32N27H26120.2°119.9°
C31C32N27H27120.2°120.0°
C31C32N27C2861.1°59.3°
C31C32N27C26175.7°176.8°
C32C31H24H25119.3°120.0°
C31C32H26H27119.6°120.1°
C07C08C03O02176.5°180.0°
C08C07C06H17180.0°180.0°
C07C08C03N040.1°0.2°
C08C07C06C19177.1°180.0°
C08C07C06C050.6°0.3°
C07C08C09O1171.2°0.1°
C08C03O02N04176.7°179.8°
C08C03O02C01169.2°179.7°
C03C08C07C060.4°0.0°
C08C03N04C050.3°0.2°
C03C08C07H17179.6°180.0°
C03C08C09O15.6°180.0°
O02C03N04C05176.2°180.0°
C03O02C01H13180.0°180.0°
C03O02C01H1460.0°60.0°
C03O02C01H1560.0°60.0°
C01O02C03N047.4°0.0°
O02C01H13H14120.0°120.0°
O02C01H13H15120.0°120.0°
O02C01H14H15120.0°120.1°
N30C29C28H7120.3°120.0°
N30C29C28H8120.3°120.0°
N30C29C28N2757.4°58.4°
N30C29C28H5177.6°178.4°
N30C29C28H662.7°61.5°
N30C29H7H8119.2°120.1°
C29N30C33H2181.3°60.0°
C29N30C31H24174.5°179.3°
C29N30C31H2565.9°60.6°
C07C06C19C05177.6°179.7°
C07C06C05N040.4°0.3°
C07C06C19C2054.8°179.7°
C07C06C19C42124.1°0.3°
C07C06C05H16179.6°179.7°
C03N04C05C060.1°0.1°
C03N04C05H16179.9°180.0°
C32N27C28C2960.5°59.3°
C32N27C28C26123.5°123.9°
C32N27C26C2536.0°170.0°
C32N27C26H3157.0°50.0°
C32N27C26H485.0°70.0°
C32N27C28H5179.4°179.3°
C32N27C28H659.7°60.6°
N27C32C31H24178.7°178.4°
N27C32C31H2561.7°61.6°
N27C32H26H27119.6°120.0°
C29C28N27H5120.1°120.0°
C29C28N27H6120.1°119.9°
C29C28N27C26176.0°176.8°
C29C28H5H6119.7°120.1°
C28C29H7H8119.2°120.0°
C28N27C26C25157.8°66.2°
C28N27C26H381.2°173.8°
C28N27C26H436.8°53.8°
N27C28H5H6119.7°120.1°
N27C28C29H762.8°178.4°
N27C28C29H8177.7°61.6°
C28N27C32H2659.0°60.6°
C28N27C32H27178.7°179.3°
N27C26C25C2498.6°90.0°
N27C26C25O3692.2°90.4°
N27C26C25H3121.0°120.0°
N27C26C25H4121.0°120.0°
N27C26H3H4116.8°120.0°
C26N27C28H555.9°56.9°
C26N27C28H663.8°63.2°
C26N27C32H2664.2°63.2°
C26N27C32H2755.5°56.8°
C19C06C05N04177.2°180.0°
C06C19C20C42179.0°180.0°
C06C19C20C21179.2°180.0°
C06C19C42C41179.2°180.0°
C06C19C20H10.8°0.3°
C19C06C05H162.8°0.0°
C19C06C07H172.9°0.0°
C06C19C42H300.8°0.0°
C06C05N04H16180.0°179.9°
C05C06C19C20127.6°0.0°
C05C06C19C4253.4°180.0°
C05C06C07H17179.4°179.7°
N23C24C25H2180.0°179.7°
N23C24C25O362.3°0.4°
N23C24C25C26167.7°180.0°
C24N23C22O360.1°0.0°
C24N23C22C21179.3°179.7°
C25C24N23C221.5°0.3°
C24C25O36C26172.1°179.6°
C24C25O36C222.1°0.4°
C24C25C26H322.4°150.1°
C24C25C26H4140.4°30.0°
N23C22C21C2013.0°179.7°
N23C22O36C251.2°0.2°
N23C22O36C21179.5°179.7°
N23C22C21C37166.5°0.3°
C22N23C24H2178.5°180.0°
C19C20C21H1180.0°179.7°
C19C20C21C22179.5°180.0°
C19C20C21C370.0°0.0°
C20C19C42C410.3°0.1°
C20C19C42H30179.8°180.0°
C21C20C19C420.2°0.0°
C20C21C22O36166.5°0.0°
C20C21C22C37179.4°180.0°
C20C21C37C410.2°0.0°
C20C21C37C38179.8°180.0°
C19C42C41H30180.0°180.0°
C19C42C41C370.1°0.1°
C19C42C41N40179.9°180.0°
C42C19C20H1179.8°179.7°
C25O36C22C21179.3°180.0°
O36C25C24H2177.7°179.9°
O36C25C26H3146.8°29.5°
O36C25C26H428.9°149.6°
C26C25O36C22170.1°180.0°
C26C25C24H212.3°0.3°
C25C26H3H4116.8°120.0°
O36C22C21C3714.1°180.0°
C22C21C37C41179.6°180.0°
C22C21C37C380.4°0.1°
C22C21C20H10.5°0.3°
C21C37C41C420.1°0.0°
C21C37C41C38180.0°180.0°
C21C37C41N40179.7°180.0°
C21C37C38N39179.7°180.0°
C37C21C20H1180.0°179.7°
C21C37C38H230.3°0.0°
C42C41C37N40179.9°180.0°
C42C41C37C38179.9°180.0°
C42C41N40N39179.9°180.0°
C41C37C38N390.3°0.0°
C37C41N40N390.1°0.0°
C41C37C38H23179.7°180.0°
C37C41C42H30179.9°180.0°
C38C37C41N400.3°0.0°
C37C38N39H23180.0°180.0°
C37C38N39N400.3°0.0°
C37C38N39H22179.7°179.9°
C41N40N39C380.1°0.0°
C41N40N39H22179.9°179.9°
N40C41C42H300.1°0.0°
C38N39N40H22180.0°179.9°
N40N39C38H23179.7°180.0°
H5C28C29H757.3°61.7°
H5C28C29H862.2°58.4°
H6C28C29H7177.1°58.4°
H6C28C29H857.6°178.4°
H10C35H11H12120.0°120.0°
H10C35C33H2164.6°60.1°
H11C35C33H21175.4°60.0°
H12C35C33H2155.5°180.0°
H13C01H14H15120.0°120.0°
H18C34H19H20119.9°119.9°
H18C34C33H2164.5°60.0°
H19C34C33H2155.6°180.0°
H20C34C33H21175.6°59.9°
H22N39C38H230.3°0.1°
H24C31C32H2658.6°58.4°
H24C31C32H2761.2°61.7°
H25C31C32H26178.1°178.5°
H25C31C32H2758.4°58.4°

222415

PDB entries from 2024-07-10

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