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C5M

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1O2sing1.43Å1.44Å
C1H1C1sing1.09Å1.10Å
C1H1C2sing1.09Å1.10Å
C1H1C3sing1.09Å1.10Å
O2C3sing1.36Å1.36Å
C3C4doub1.39Å1.39ÅAromatic
C3C10sing1.39Å1.38ÅAromatic
C4C5sing1.38Å1.38ÅAromatic
C4H4sing1.08Å1.08Å
C5C6sing1.51Å1.52Å
C5C7doub1.38Å1.40ÅAromatic
C6H6C1sing1.09Å1.10Å
C6H6C2sing1.09Å1.10Å
C6H6C3sing1.09Å1.10Å
C7C8sing1.38Å1.41ÅAromatic
C7S12sing1.76Å1.79Å
C8C9sing1.51Å1.51Å
C8C10doub1.38Å1.39ÅAromatic
C9H9C1sing1.09Å1.10Å
C9H9C2sing1.09Å1.10Å
C9H9C3sing1.09Å1.10Å
C10C11sing1.51Å1.51Å
C11H111sing1.09Å1.10Å
C11H112sing1.09Å1.10Å
C11H113sing1.09Å1.10Å
S12O13doub1.42Å1.43Å
S12O14doub1.42Å1.42Å
S12N15sing1.66Å1.65Å
N15C16sing1.46Å1.47Å
N15H15sing0.97Å1.00Å
C16C17sing1.53Å1.54Å
C16H161sing1.09Å1.10Å
C16H162sing1.09Å1.10Å
C17O18sing1.43Å1.43Å
C17C19sing1.53Å1.54Å
C17H17sing1.09Å1.10Å
O18H18sing0.97Å0.95Å
C19C20sing1.53Å1.54Å
C19N27sing1.47Å1.47Å
C19H19sing1.09Å1.10Å
C20C21sing1.51Å1.52Å
C20H201sing1.09Å1.10Å
C20H202sing1.09Å1.10Å
C21C22doub1.38Å1.40ÅAromatic
C21C26sing1.38Å1.39ÅAromatic
C22C23sing1.38Å1.39ÅAromatic
C22H22sing1.08Å1.08Å
C23C24doub1.38Å1.38ÅAromatic
C23H23sing1.08Å1.08Å
C24C25sing1.38Å1.39ÅAromatic
C24H24sing1.08Å1.08Å
C25C26doub1.38Å1.39ÅAromatic
C25H25sing1.08Å1.08Å
C26H26sing1.08Å1.08Å
N27C28sing1.47Å1.50Å
N27H27sing1.01Å1.00Å
C28C29sing1.51Å1.50Å
C28H281sing1.09Å1.10Å
C28H282sing1.09Å1.10Å
C29C30doub1.38Å1.39ÅAromatic
C29C35sing1.38Å1.40ÅAromatic
C30C31sing1.38Å1.40ÅAromatic
C30H30sing1.08Å1.08Å
C31C32doub1.38Å1.40ÅAromatic
C31H31sing1.08Å1.08Å
C32C33sing1.38Å1.40ÅAromatic
C32H32sing1.08Å1.08Å
C33CL34sing1.74Å1.76Å
C33C35doub1.38Å1.41ÅAromatic
C35H35sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O2C1H1C1109.5°109.4°
O2C1H1C2109.4°109.5°
O2C1H1C3109.5°109.5°
C1O2C3109.5°106.8°
H1C1C1H1C2109.5°109.5°
H1C1C1H1C3109.5°109.5°
H1C2C1H1C3109.5°109.5°
O2C3C4120.7°120.1°
O2C3C10119.7°120.1°
C4C3C10119.6°119.9°
C3C4C5121.7°120.0°
C3C4H4119.1°120.0°
C3C10C8119.5°119.9°
C3C10C11119.5°120.0°
C5C4H4119.1°120.0°
C4C5C6116.2°120.0°
C4C5C7119.4°120.1°
C6C5C7124.3°119.9°
C5C6H6C1109.5°109.5°
C5C6H6C2109.5°109.5°
C5C6H6C3109.5°109.4°
C5C7C8118.4°120.1°
C5C7S12122.4°120.0°
H6C1C6H6C2109.5°109.5°
H6C1C6H6C3109.5°109.5°
H6C2C6H6C3109.4°109.5°
C8C7S12119.2°120.0°
C7C8C9120.5°119.9°
C7C8C10121.4°120.1°
C7S12O13106.9°105.7°
C7S12O14107.5°105.8°
C7S12N15108.3°107.4°
C9C8C10118.1°120.0°
C8C9H9C1109.5°109.5°
C8C9H9C2109.4°109.4°
C8C9H9C3109.5°109.5°
C8C10C11121.0°120.0°
H9C1C9H9C2109.5°109.4°
H9C1C9H9C3109.4°109.4°
H9C2C9H9C3109.5°109.5°
C10C11H111109.4°109.5°
C10C11H112109.5°109.5°
C10C11H113109.5°109.5°
H111C11H112109.5°109.4°
H111C11H113109.5°109.5°
H112C11H113109.5°109.4°
O13S12O14123.6°125.4°
O13S12N15104.3°105.8°
O14S12N15105.5°105.8°
S12N15C16121.8°120.0°
S12N15H15105.5°120.0°
C16N15H15105.6°120.0°
N15C16C17110.2°109.5°
N15C16H161109.1°109.5°
N15C16H162109.2°109.5°
C17C16H161109.1°109.5°
C17C16H162109.2°109.5°
C16C17O18108.1°109.4°
C16C17C19110.8°109.4°
C16C17H17109.3°109.4°
H161C16H162110.0°109.4°
O18C17C19108.8°109.5°
O18C17H17111.3°109.5°
C17O18H18109.5°106.8°
C19C17H17108.6°109.5°
C17C19C20111.6°109.5°
C17C19N27109.3°109.4°
C17C19H19107.7°109.5°
C20C19N27107.8°109.5°
C20C19H19109.1°109.5°
C19C20C21113.3°109.5°
C19C20H201107.3°109.5°
C19C20H202108.2°109.5°
N27C19H19111.4°109.5°
C19N27C28112.7°106.7°
C19N27H27108.4°106.7°
C21C20H201107.4°109.4°
C21C20H202108.2°109.5°
C20C21C22119.5°120.1°
C20C21C26121.1°120.0°
H201C20H202112.5°109.5°
C22C21C26119.4°120.0°
C21C22C23120.4°120.0°
C21C22H22119.8°120.0°
C21C26C25119.9°120.0°
C21C26H26120.0°120.0°
C23C22H22119.8°120.0°
C22C23C24120.2°120.0°
C22C23H23120.0°120.0°
C24C23H23119.9°120.0°
C23C24C25119.7°120.0°
C23C24H24120.2°120.0°
C25C24H24120.1°120.0°
C24C25C26120.4°120.0°
C24C25H25119.8°120.0°
C26C25H25119.8°120.0°
C25C26H26120.0°120.0°
C28N27H27108.4°106.7°
N27C28C29104.6°109.5°
N27C28H281112.2°109.5°
N27C28H282111.1°109.5°
C29C28H281112.2°109.4°
C29C28H282111.2°109.5°
C28C29C30118.8°120.0°
C28C29C35120.5°120.0°
H281C28H282105.8°109.5°
C30C29C35120.6°120.0°
C29C30C31120.5°120.0°
C29C30H30119.8°120.0°
C29C35C33119.6°120.0°
C29C35H35120.2°120.0°
C31C30H30119.8°120.0°
C30C31C32118.8°120.0°
C30C31H31120.6°120.0°
C32C31H31120.6°120.0°
C31C32C33121.2°120.0°
C31C32H32119.4°120.0°
C33C32H32119.4°120.0°
C32C33CL34120.0°120.0°
C32C33C35119.4°119.9°
CL34C33C35120.6°120.1°
C33C35H35120.2°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O2C1H1C1H1C2120.0°120.0°
O2C1H1C1H1C3120.0°120.0°
O2C1H1C2H1C3120.0°120.0°
C1O2C3C43.3°0.0°
C1O2C3C10174.9°179.7°
H1C1C1H1C2H1C3120.0°120.0°
H1C1C1O2C389.3°60.0°
H1C2C1O2C3150.7°180.0°
H1C3C1O2C330.7°60.0°
O2C3C4C10178.2°179.7°
O2C3C4C5179.5°180.0°
O2C3C4H40.5°0.1°
O2C3C10C8178.4°179.7°
O2C3C10C110.5°0.3°
C3C4C5H4180.0°179.9°
C3C4C5C6179.5°180.0°
C3C4C5C71.8°0.1°
C4C3C10C80.2°0.6°
C4C3C10C11178.7°180.0°
C10C3C4C51.3°0.3°
C10C3C4H4178.7°179.8°
C3C10C8C70.4°0.6°
C3C10C8C9179.4°179.7°
C3C10C8C11178.9°179.4°
C3C10C11H11151.5°90.6°
C3C10C11H112171.5°29.4°
C3C10C11H11368.5°149.4°
C4C5C6C7178.6°179.9°
C4C5C6H6C18.9°97.2°
C4C5C6H6C2128.9°142.7°
C4C5C6H6C3111.1°22.7°
C4C5C7C81.1°0.1°
C4C5C7S12179.0°180.0°
H4C4C5C60.4°0.1°
H4C4C5C7178.2°180.0°
C5C6H6C1H6C2120.0°120.1°
C5C6H6C1H6C3120.0°119.9°
C5C6H6C2H6C3120.0°119.9°
C6C5C7C8179.7°180.0°
C6C5C7S120.4°0.0°
C7C5C6H6C1172.5°82.7°
C7C5C6H6C252.5°37.4°
C7C5C6H6C367.5°157.3°
C5C7C8S12179.9°180.0°
C5C7C8C9179.8°180.0°
C5C7C8C100.0°0.4°
C5C7S12O133.3°155.8°
C5C7S12O14131.3°21.0°
C5C7S12N15115.2°91.7°
H6C1C6H6C2H6C3120.0°120.0°
C7C8C9C10179.8°179.6°
C7C8C9H9C130.0°83.9°
C7C8C9H9C290.0°156.2°
C7C8C9H9C3149.9°36.2°
C7C8C10C11179.3°180.0°
C8C7S12O13176.6°24.3°
C8C7S12O1448.8°159.1°
C8C7S12N1564.7°88.3°
S12C7C8C90.2°0.0°
S12C7C8C10179.9°179.7°
C7S12O13O14125.4°123.2°
C7S12O13N15114.6°113.7°
C7S12O14N15115.4°113.7°
C7S12N15C1648.6°65.0°
C7S12N15H15168.6°115.0°
C8C9H9C1H9C2120.0°120.0°
C8C9H9C1H9C3120.0°120.1°
C8C9H9C2H9C3120.1°120.0°
C9C8C10C110.5°0.4°
C10C8C9H9C1149.8°95.8°
C10C8C9H9C290.2°24.2°
C10C8C9H9C329.9°144.2°
C8C10C11H111127.4°90.1°
C8C10C11H1127.4°150.0°
C8C10C11H113112.6°30.0°
H9C1C9H9C2H9C3119.9°119.9°
C10C11H111H112120.0°120.0°
C10C11H111H113120.0°120.1°
C10C11H112H113120.0°120.0°
H111C11H112H113120.0°119.9°
O13S12O14N15119.4°123.1°
O13S12N15C1665.1°177.6°
O13S12N15H1554.9°2.4°
O14S12N15C16163.4°47.6°
O14S12N15H1576.6°132.4°
S12N15C16H15120.0°180.0°
S12N15C16C17106.1°165.0°
S12N15C16H16113.6°75.0°
S12N15C16H162133.9°44.9°
N15C16C17H161119.7°120.0°
N15C16C17H162120.0°120.0°
N15C16H161H162119.8°120.0°
N15C16C17O1833.7°65.0°
N15C16C17C19152.9°175.0°
N15C16C17H1787.5°55.0°
H15N15C16C1713.9°15.0°
H15N15C16H161133.6°105.0°
H15N15C16H162106.1°135.1°
C17C16H161H162119.8°120.0°
C16C17O18C19120.5°120.0°
C16C17O18H17120.0°120.0°
C16C17C19H17120.0°119.9°
C16C17O18H1813.8°60.0°
C16C17C19C2049.9°65.0°
C16C17C19N2769.3°175.0°
C16C17C19H19169.6°55.0°
H161C16C17O18153.4°55.0°
H161C16C17C1987.4°65.0°
H161C16C17H1732.2°175.0°
H162C16C17O1886.3°174.9°
H162C16C17C1932.9°54.9°
H162C16C17H17152.5°65.0°
O18C17C19H17121.2°120.1°
O18C17C19C20168.7°54.9°
O18C17C19N2749.5°65.0°
O18C17C19H1971.6°175.0°
C19C17O18H18106.6°59.9°
C17C19C20N27120.1°120.0°
C17C19C20H19118.8°120.0°
C17C19N27H19118.9°120.0°
C17C19C20C2151.2°177.0°
C17C19C20H20167.1°63.0°
C17C19C20H202171.2°57.0°
C17C19N27C28149.9°86.9°
C17C19N27H2729.9°26.9°
H17C17O18H18133.8°180.0°
H17C17C19C2070.1°175.0°
H17C17C19N27170.7°55.1°
H17C17C19H1949.6°65.0°
C20C19N27H19119.7°120.0°
C19C20C21H201118.3°120.0°
C19C20C21H202120.0°120.0°
C19C20H201H202118.9°120.0°
C19C20C21C22130.9°95.5°
C19C20C21C2650.3°84.8°
C20C19N27C2888.6°153.1°
C20C19N27H27151.3°93.1°
N27C19C20C21171.2°63.0°
N27C19C20H20152.9°56.9°
N27C19C20H20268.8°176.9°
C19N27C28H27120.0°113.8°
C19N27C28C29178.4°174.4°
C19N27C28H28159.8°54.5°
C19N27C28H28258.4°65.5°
H19C19C20C2167.6°57.0°
H19C19C20H201174.0°177.0°
H19C19C20H20252.4°63.0°
H19C19N27C2831.0°33.1°
H19C19N27H2789.0°146.9°
C21C20H201H202119.0°120.0°
C20C21C22C26178.9°179.7°
C20C21C22C23179.8°180.0°
C20C21C22H220.2°0.0°
C20C21C26C25179.2°179.8°
C20C21C26H260.8°0.3°
H201C20C21C2212.5°24.5°
H201C20C21C26168.6°155.2°
H202C20C21C22109.1°144.5°
H202C20C21C2669.7°35.2°
C21C22C23H22180.0°180.0°
C21C22C23C241.0°0.0°
C21C22C23H23179.0°180.0°
C22C21C26C250.3°0.5°
C22C21C26H26179.6°180.0°
C26C21C22C230.9°0.3°
C26C21C22H22179.1°179.7°
C21C26C25C240.2°0.5°
C21C26C25H26180.0°179.5°
C21C26C25H25179.8°179.7°
C22C23C24H23180.0°180.0°
C22C23C24C250.5°0.0°
C22C23C24H24179.5°180.0°
H22C22C23C24179.0°180.0°
H22C22C23H231.0°0.0°
C23C24C25H24180.0°180.0°
C23C24C25C260.1°0.2°
C23C24C25H25179.9°180.0°
H23C23C24C25179.5°180.0°
H23C23C24H240.5°0.0°
C24C25C26H25180.0°179.8°
C24C25C26H26179.9°179.9°
H24C24C25C26179.9°179.8°
H24C24C25H250.1°0.0°
H25C25C26H260.2°0.2°
N27C28C29H281121.8°120.0°
N27C28C29H282120.0°120.0°
N27C28H281H282121.3°120.0°
N27C28C29C3080.1°90.0°
N27C28C29C3596.5°90.3°
H27N27C28C2961.6°71.8°
H27N27C28H28160.2°168.3°
H27N27C28H282178.4°48.3°
C29C28H281H282121.3°120.0°
C28C29C30C35176.6°179.8°
C28C29C30C31177.5°180.0°
C28C29C30H302.5°0.0°
C28C29C35C33176.7°179.8°
C28C29C35H353.3°0.2°
H281C28C29C3041.7°30.0°
H281C28C29C35141.6°149.8°
H282C28C29C30159.9°150.0°
H282C28C29C3523.5°29.8°
C29C30C31H30180.0°180.0°
C29C30C31C320.9°0.0°
C29C30C31H31179.1°180.0°
C30C29C35C330.2°0.5°
C30C29C35H35179.8°180.0°
C35C29C30C310.9°0.2°
C35C29C30H30179.1°179.8°
C29C35C33C320.5°0.5°
C29C35C33CL34179.0°179.8°
C29C35C33H35180.0°179.6°
C30C31C32H31180.0°180.0°
C30C31C32C330.2°0.0°
C30C31C32H32179.7°179.9°
H30C30C31C32179.1°180.0°
H30C30C31H310.9°0.0°
C31C32C33H32180.0°179.9°
C31C32C33CL34179.0°180.0°
C31C32C33C350.5°0.3°
H31C31C32C33179.8°180.0°
H31C31C32H320.2°0.1°
C32C33CL34C35178.5°179.7°
C32C33C35H35179.5°180.0°
H32C32C33CL341.0°0.1°
H32C32C33C35179.6°179.9°
CL34C33C35H351.0°0.2°

218500

PDB entries from 2024-04-17

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