C5E
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
O | C | doub | 1.22Å | 1.25Å | |
C | N | sing | 1.36Å | 1.41Å | |
C | C1 | sing | 1.40Å | 1.39Å | |
N | C5 | sing | 1.46Å | 1.47Å | |
N | C4 | sing | 1.35Å | 1.41Å | |
C5 | C6 | sing | 1.52Å | 1.52Å | |
C6 | C10 | sing | 1.52Å | 1.52Å | |
C6 | C7 | sing | 1.53Å | 1.51Å | |
C10 | N1 | sing | 1.47Å | 1.45Å | |
N1 | C9 | sing | 1.47Å | 1.48Å | |
C9 | C8 | sing | 1.54Å | 1.52Å | |
C8 | C7 | sing | 1.53Å | 1.50Å | |
C8 | C4 | sing | 1.51Å | 1.47Å | |
C4 | C3 | doub | 1.36Å | 1.38Å | |
C3 | C2 | sing | 1.40Å | 1.38Å | |
C2 | C1 | doub | 1.36Å | 1.38Å | |
C1 | H1 | sing | 1.08Å | 1.08Å | |
C5 | H51C | sing | 1.09Å | 1.10Å | |
C5 | H52C | sing | 1.09Å | 1.10Å | |
C6 | H6 | sing | 1.09Å | 1.10Å | |
C10 | H101 | sing | 1.09Å | 1.10Å | |
C10 | H102 | sing | 1.09Å | 1.10Å | |
C7 | H71C | sing | 1.09Å | 1.10Å | |
C7 | H72C | sing | 1.09Å | 1.10Å | |
N1 | HA | sing | 1.01Å | 1.00Å | |
C9 | H91C | sing | 1.09Å | 1.10Å | |
C9 | H92C | sing | 1.09Å | 1.10Å | |
C8 | H8 | sing | 1.09Å | 1.10Å | |
C3 | H3 | sing | 1.08Å | 1.08Å | |
C2 | H2 | sing | 1.08Å | 1.08Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O | C | N | 118.3° | 119.6° |
O | C | C1 | 119.1° | 119.6° |
N | C | C1 | 122.5° | 120.8° |
C | N | C5 | 111.0° | 116.9° |
C | N | C4 | 114.9° | 119.8° |
C | C1 | C2 | 120.0° | 119.1° |
C | C1 | H1 | 120.0° | 120.4° |
C5 | N | C4 | 110.8° | 123.2° |
N | C5 | C6 | 111.4° | 112.4° |
N | C5 | H51C | 109.0° | 108.9° |
N | C5 | H52C | 109.0° | 108.9° |
N | C4 | C8 | 119.0° | 122.0° |
N | C4 | C3 | 122.5° | 120.6° |
C5 | C6 | C10 | 110.7° | 111.9° |
C5 | C6 | C7 | 107.6° | 109.4° |
C6 | C5 | H51C | 109.0° | 108.9° |
C6 | C5 | H52C | 109.0° | 108.9° |
C5 | C6 | H6 | 108.3° | 108.4° |
C10 | C6 | C7 | 113.2° | 110.8° |
C6 | C10 | N1 | 114.6° | 111.1° |
C10 | C6 | H6 | 108.4° | 108.4° |
C6 | C10 | H101 | 108.2° | 109.2° |
C6 | C10 | H102 | 108.2° | 109.2° |
C6 | C7 | C8 | 107.7° | 107.5° |
C7 | C6 | H6 | 108.4° | 107.9° |
C6 | C7 | H71C | 109.9° | 109.8° |
C6 | C7 | H72C | 109.9° | 109.8° |
C10 | N1 | C9 | 112.3° | 111.2° |
N1 | C10 | H101 | 108.2° | 109.2° |
N1 | C10 | H102 | 108.2° | 109.1° |
C10 | N1 | HA | 108.8° | 111.0° |
N1 | C9 | C8 | 114.2° | 108.0° |
C9 | N1 | HA | 108.8° | 111.0° |
N1 | C9 | H91C | 108.3° | 109.7° |
N1 | C9 | H92C | 108.3° | 109.8° |
C9 | C8 | C7 | 108.0° | 108.0° |
C9 | C8 | C4 | 114.1° | 107.5° |
C8 | C9 | H91C | 108.3° | 109.7° |
C8 | C9 | H92C | 108.3° | 109.8° |
C9 | C8 | H8 | 109.4° | 110.6° |
C7 | C8 | C4 | 105.5° | 109.2° |
C8 | C7 | H71C | 109.9° | 109.9° |
C8 | C7 | H72C | 109.9° | 109.9° |
C7 | C8 | H8 | 109.7° | 110.5° |
C8 | C4 | C3 | 118.5° | 117.3° |
C4 | C8 | H8 | 110.1° | 111.0° |
C4 | C3 | C2 | 120.2° | 120.5° |
C4 | C3 | H3 | 119.9° | 119.8° |
C3 | C2 | C1 | 119.7° | 118.9° |
C2 | C3 | H3 | 119.9° | 119.7° |
C3 | C2 | H2 | 120.2° | 120.6° |
C2 | C1 | H1 | 120.0° | 120.5° |
C1 | C2 | H2 | 120.1° | 120.5° |
H51C | C5 | H52C | 109.4° | 108.8° |
H101 | C10 | H102 | 109.5° | 109.1° |
H71C | C7 | H72C | 109.5° | 109.9° |
H91C | C9 | H92C | 109.5° | 109.8° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O | C | N | C1 | 176.5° | 179.7° |
O | C | N | C5 | 52.4° | 7.5° |
O | C | N | C4 | 179.0° | 174.2° |
O | C | C1 | C2 | 179.2° | 177.8° |
O | C | C1 | H1 | 0.8° | 1.9° |
C | N | C5 | C4 | 128.9° | 178.3° |
C | N | C5 | C6 | 178.5° | 162.5° |
C | N | C4 | C8 | 177.8° | 171.8° |
C | N | C4 | C3 | 4.0° | 6.6° |
N | C | C1 | C2 | 2.8° | 2.5° |
N | C | C1 | H1 | 177.2° | 177.8° |
C | N | C5 | H51C | 61.2° | 41.8° |
C | N | C5 | H52C | 58.1° | 76.7° |
C1 | C | N | C5 | 131.1° | 172.2° |
C1 | C | N | C4 | 4.5° | 6.1° |
C | C1 | C2 | C3 | 0.3° | 0.6° |
C | C1 | C2 | H1 | 180.0° | 179.7° |
C | C1 | C2 | H2 | 179.7° | 179.1° |
N | C5 | C6 | H51C | 120.3° | 120.7° |
N | C5 | C6 | H52C | 120.3° | 120.8° |
N | C5 | C6 | C10 | 65.5° | 75.9° |
N | C5 | C6 | C7 | 58.8° | 47.3° |
C5 | N | C4 | C8 | 51.0° | 9.9° |
C5 | N | C4 | C3 | 130.8° | 171.7° |
N | C5 | H51C | H52C | 119.1° | 118.6° |
N | C5 | C6 | H6 | 175.9° | 164.7° |
C4 | N | C5 | C6 | 49.5° | 19.2° |
N | C4 | C8 | C9 | 61.6° | 88.6° |
N | C4 | C8 | C7 | 56.9° | 28.3° |
N | C4 | C8 | C3 | 178.3° | 178.4° |
N | C4 | C3 | C2 | 1.9° | 3.4° |
C4 | N | C5 | H51C | 169.8° | 139.9° |
C4 | N | C5 | H52C | 70.8° | 101.6° |
N | C4 | C8 | H8 | 175.1° | 150.3° |
N | C4 | C3 | H3 | 178.1° | 176.6° |
C5 | C6 | C10 | C7 | 121.0° | 122.4° |
C5 | C6 | C10 | H6 | 118.6° | 119.4° |
C5 | C6 | C7 | H6 | 117.0° | 117.8° |
C5 | C6 | C10 | N1 | 72.0° | 67.1° |
C5 | C6 | C7 | C8 | 65.5° | 66.8° |
C6 | C5 | H51C | H52C | 119.1° | 118.6° |
C5 | C6 | C10 | H101 | 48.8° | 53.4° |
C5 | C6 | C10 | H102 | 167.3° | 172.6° |
C5 | C6 | C7 | H71C | 174.8° | 173.6° |
C5 | C6 | C7 | H72C | 54.2° | 52.7° |
C10 | C6 | C7 | H6 | 120.3° | 118.4° |
C6 | C10 | N1 | H101 | 120.7° | 120.4° |
C6 | C10 | N1 | H102 | 120.7° | 120.4° |
C6 | C10 | N1 | C9 | 43.5° | 58.4° |
C10 | C6 | C7 | C8 | 57.2° | 57.0° |
C10 | C6 | C5 | H51C | 54.8° | 44.8° |
C10 | C6 | C5 | H52C | 174.2° | 163.4° |
C6 | C10 | H101 | H102 | 117.7° | 119.2° |
C10 | C6 | C7 | H71C | 62.5° | 62.6° |
C10 | C6 | C7 | H72C | 176.9° | 176.5° |
C6 | C10 | N1 | HA | 76.9° | 65.7° |
C7 | C6 | C10 | N1 | 49.0° | 55.3° |
C6 | C7 | C8 | C9 | 60.9° | 61.4° |
C6 | C7 | C8 | H71C | 119.7° | 119.5° |
C6 | C7 | C8 | H72C | 119.7° | 119.5° |
C6 | C7 | C8 | C4 | 61.5° | 55.2° |
C7 | C6 | C5 | H51C | 179.1° | 168.0° |
C7 | C6 | C5 | H52C | 61.5° | 73.5° |
C7 | C6 | C10 | H101 | 169.7° | 175.8° |
C7 | C6 | C10 | H102 | 71.7° | 65.0° |
C6 | C7 | H71C | H72C | 120.8° | 120.9° |
C6 | C7 | C8 | H8 | 180.0° | 177.5° |
C10 | N1 | C9 | HA | 120.4° | 124.1° |
C10 | N1 | C9 | C8 | 50.1° | 62.9° |
N1 | C10 | C6 | H6 | 169.4° | 173.5° |
N1 | C10 | H101 | H102 | 117.7° | 119.2° |
C10 | N1 | C9 | H91C | 170.8° | 177.5° |
C10 | N1 | C9 | H92C | 70.6° | 56.9° |
N1 | C9 | C8 | H91C | 120.7° | 119.6° |
N1 | C9 | C8 | H92C | 120.7° | 119.7° |
N1 | C9 | C8 | C7 | 59.6° | 64.6° |
N1 | C9 | C8 | C4 | 57.3° | 53.1° |
C9 | N1 | C10 | H101 | 164.3° | 178.8° |
C9 | N1 | C10 | H102 | 77.2° | 62.0° |
N1 | C9 | H91C | H92C | 117.8° | 120.7° |
N1 | C9 | C8 | H8 | 178.9° | 174.4° |
C9 | C8 | C7 | C4 | 122.4° | 116.6° |
C9 | C8 | C7 | H8 | 119.1° | 121.0° |
C9 | C8 | C4 | H8 | 123.4° | 121.1° |
C9 | C8 | C4 | C3 | 116.7° | 89.8° |
C9 | C8 | C7 | H71C | 58.9° | 58.1° |
C9 | C8 | C7 | H72C | 179.4° | 179.1° |
C8 | C9 | N1 | HA | 70.4° | 61.2° |
C8 | C9 | H91C | H92C | 117.8° | 120.8° |
C7 | C8 | C4 | H8 | 118.2° | 122.0° |
C7 | C8 | C4 | C3 | 124.9° | 153.3° |
C8 | C7 | C6 | H6 | 177.5° | 175.4° |
C8 | C7 | H71C | H72C | 120.8° | 121.0° |
C7 | C8 | C9 | H91C | 179.7° | 175.8° |
C7 | C8 | C9 | H92C | 61.1° | 55.1° |
C8 | C4 | C3 | C2 | 179.9° | 175.0° |
C4 | C8 | C7 | H71C | 178.7° | 174.7° |
C4 | C8 | C7 | H72C | 58.2° | 64.3° |
C4 | C8 | C9 | H91C | 63.4° | 66.5° |
C4 | C8 | C9 | H92C | 178.0° | 172.8° |
C8 | C4 | C3 | H3 | 0.1° | 5.0° |
C4 | C3 | C2 | H3 | 180.0° | 180.0° |
C4 | C3 | C2 | C1 | 0.1° | 0.2° |
C3 | C4 | C8 | H8 | 6.7° | 31.3° |
C4 | C3 | C2 | H2 | 179.9° | 179.5° |
C3 | C2 | C1 | H2 | 180.0° | 179.6° |
C3 | C2 | C1 | H1 | 179.7° | 179.1° |
C1 | C2 | C3 | H3 | 179.9° | 179.8° |
H1 | C1 | C2 | H2 | 0.3° | 1.2° |
H51C | C5 | C6 | H6 | 63.8° | 74.6° |
H52C | C5 | C6 | H6 | 55.5° | 43.9° |
H6 | C6 | C10 | H101 | 69.9° | 66.1° |
H6 | C6 | C10 | H102 | 48.6° | 53.1° |
H6 | C6 | C7 | H71C | 57.8° | 55.9° |
H6 | C6 | C7 | H72C | 62.7° | 65.1° |
H101 | C10 | N1 | HA | 43.8° | 54.7° |
H102 | C10 | N1 | HA | 162.4° | 173.9° |
H71C | C7 | C8 | H8 | 60.2° | 63.0° |
H72C | C7 | C8 | H8 | 60.3° | 58.0° |
HA | N1 | C9 | H91C | 50.3° | 58.4° |
HA | N1 | C9 | H92C | 168.9° | 179.1° |
H91C | C9 | C8 | H8 | 60.4° | 54.9° |
H92C | C9 | C8 | H8 | 58.2° | 65.9° |
H3 | C3 | C2 | H2 | 0.1° | 0.5° |