C43
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| P | OP3 | sing | 1.61Å | 1.50Å | |
| P | OP2 | sing | 1.61Å | 1.60Å | |
| P | OP1 | doub | 1.48Å | 1.49Å | |
| P | O5' | sing | 1.61Å | 1.59Å | |
| OP3 | HOP3 | sing | 0.97Å | 0.95Å | |
| OP2 | HOP2 | sing | 0.97Å | 0.95Å | |
| O5' | C5' | sing | 1.43Å | 1.42Å | |
| C5' | C4' | sing | 1.53Å | 1.50Å | |
| C5' | H5'1 | sing | 1.09Å | 1.10Å | |
| C5' | H5'2 | sing | 1.09Å | 1.10Å | |
| C4' | O4' | sing | 1.44Å | 1.46Å | |
| C4' | C3' | sing | 1.54Å | 1.52Å | |
| C4' | H4' | sing | 1.09Å | 1.10Å | |
| O4' | C1' | sing | 1.44Å | 1.42Å | |
| C3' | O3' | sing | 1.43Å | 1.41Å | |
| C3' | C2' | sing | 1.55Å | 1.52Å | |
| C3' | H3' | sing | 1.09Å | 1.10Å | |
| O3' | HA | sing | 0.97Å | 0.95Å | |
| C2' | O2' | sing | 1.43Å | 1.41Å | |
| C2' | C1' | sing | 1.55Å | 1.52Å | |
| C2' | H2' | sing | 1.09Å | 1.10Å | |
| O2' | CA' | sing | 1.43Å | 1.42Å | |
| C1' | N1 | sing | 1.46Å | 1.47Å | |
| C1' | H1' | sing | 1.09Å | 1.10Å | |
| N1 | C2 | sing | 1.35Å | 1.41Å | |
| N1 | C6 | sing | 1.36Å | 1.36Å | |
| C2 | O2 | doub | 1.22Å | 1.25Å | |
| C2 | N3 | sing | 1.33Å | 1.36Å | |
| N3 | C4 | doub | 1.33Å | 1.34Å | |
| C4 | N4 | sing | 1.38Å | 1.34Å | |
| C4 | C5 | sing | 1.41Å | 1.43Å | |
| N4 | H4N1 | sing | 0.97Å | 1.00Å | |
| N4 | H4N2 | sing | 0.97Å | 1.00Å | |
| C5 | C6 | doub | 1.36Å | 1.34Å | |
| C5 | H5 | sing | 1.08Å | 1.08Å | |
| C6 | H6 | sing | 1.08Å | 1.08Å | |
| CA' | CB' | sing | 1.53Å | 1.50Å | |
| CA' | HA'1 | sing | 1.09Å | 1.10Å | |
| CA' | HA'2 | sing | 1.09Å | 1.10Å | |
| CB' | OC' | sing | 1.43Å | 1.46Å | |
| CB' | HB'1 | sing | 1.09Å | 1.10Å | |
| CB' | HB'2 | sing | 1.09Å | 1.10Å | |
| CD' | OC' | sing | 1.43Å | 1.47Å | |
| CD' | HD'1 | sing | 1.09Å | 1.10Å | |
| CD' | HD'2 | sing | 1.09Å | 1.10Å | |
| CD' | HD'3 | sing | 1.09Å | 1.10Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| OP3 | P | OP2 | 105.9° | 109.5° |
| OP3 | P | OP1 | 119.2° | 109.5° |
| OP3 | P | O5' | 107.8° | 109.5° |
| P | OP3 | HOP3 | 109.5° | 114.0° |
| OP2 | P | OP1 | 112.8° | 109.4° |
| OP2 | P | O5' | 103.4° | 109.5° |
| P | OP2 | HOP2 | 109.5° | 114.0° |
| OP1 | P | O5' | 106.6° | 109.5° |
| P | O5' | C5' | 121.2° | 123.0° |
| O5' | C5' | C4' | 109.2° | 109.5° |
| O5' | C5' | H5'1 | 109.5° | 109.5° |
| O5' | C5' | H5'2 | 109.5° | 109.5° |
| C4' | C5' | H5'1 | 109.5° | 109.5° |
| C4' | C5' | H5'2 | 109.6° | 109.4° |
| C5' | C4' | O4' | 109.6° | 109.9° |
| C5' | C4' | C3' | 114.7° | 109.9° |
| C5' | C4' | H4' | 109.7° | 109.9° |
| H5'1 | C5' | H5'2 | 109.5° | 109.4° |
| O4' | C4' | C3' | 103.0° | 107.3° |
| O4' | C4' | H4' | 110.3° | 109.8° |
| C4' | O4' | C1' | 109.7° | 107.0° |
| C3' | C4' | H4' | 109.4° | 110.0° |
| C4' | C3' | O3' | 115.5° | 110.4° |
| C4' | C3' | C2' | 102.0° | 104.2° |
| C4' | C3' | H3' | 108.4° | 110.5° |
| O4' | C1' | C2' | 107.1° | 103.5° |
| O4' | C1' | N1 | 108.7° | 110.6° |
| O4' | C1' | H1' | 111.5° | 110.6° |
| O3' | C3' | C2' | 112.3° | 110.5° |
| O3' | C3' | H3' | 109.9° | 110.5° |
| C3' | O3' | HA | 109.5° | 114.0° |
| C2' | C3' | H3' | 108.3° | 110.6° |
| C3' | C2' | O2' | 110.9° | 110.9° |
| C3' | C2' | C1' | 101.0° | 102.1° |
| C3' | C2' | H2' | 110.6° | 110.9° |
| O2' | C2' | C1' | 111.1° | 110.9° |
| O2' | C2' | H2' | 112.2° | 110.8° |
| C2' | O2' | CA' | 119.5° | 114.0° |
| C1' | C2' | H2' | 110.5° | 110.9° |
| C2' | C1' | N1 | 108.7° | 110.6° |
| C2' | C1' | H1' | 110.0° | 110.6° |
| O2' | CA' | CB' | 106.1° | 109.5° |
| O2' | CA' | HA'1 | 110.3° | 109.4° |
| O2' | CA' | HA'2 | 110.3° | 109.4° |
| N1 | C1' | H1' | 110.7° | 110.7° |
| C1' | N1 | C2 | 118.7° | 119.8° |
| C1' | N1 | C6 | 121.0° | 119.8° |
| C2 | N1 | C6 | 120.3° | 120.3° |
| N1 | C2 | O2 | 119.3° | 119.4° |
| N1 | C2 | N3 | 119.0° | 121.1° |
| N1 | C6 | C5 | 121.3° | 119.2° |
| N1 | C6 | H6 | 119.3° | 120.4° |
| O2 | C2 | N3 | 121.7° | 119.5° |
| C2 | N3 | C4 | 120.1° | 120.7° |
| N3 | C4 | N4 | 118.2° | 120.2° |
| N3 | C4 | C5 | 121.8° | 119.6° |
| N4 | C4 | C5 | 120.0° | 120.2° |
| C4 | N4 | H4N1 | 120.0° | 120.0° |
| C4 | N4 | H4N2 | 120.0° | 119.9° |
| C4 | C5 | C6 | 117.5° | 119.0° |
| C4 | C5 | H5 | 121.2° | 120.6° |
| H4N1 | N4 | H4N2 | 120.0° | 120.0° |
| C6 | C5 | H5 | 121.2° | 120.4° |
| C5 | C6 | H6 | 119.4° | 120.4° |
| CB' | CA' | HA'1 | 110.3° | 109.5° |
| CB' | CA' | HA'2 | 110.3° | 109.5° |
| CA' | CB' | OC' | 110.9° | 109.5° |
| CA' | CB' | HB'1 | 109.1° | 109.4° |
| CA' | CB' | HB'2 | 109.1° | 109.5° |
| HA'1 | CA' | HA'2 | 109.5° | 109.5° |
| OC' | CB' | HB'1 | 109.1° | 109.5° |
| OC' | CB' | HB'2 | 109.1° | 109.5° |
| CB' | OC' | CD' | 113.0° | 114.0° |
| HB'1 | CB' | HB'2 | 109.5° | 109.4° |
| OC' | CD' | HD'1 | 109.5° | 109.5° |
| OC' | CD' | HD'2 | 109.5° | 109.5° |
| OC' | CD' | HD'3 | 109.5° | 109.5° |
| HD'1 | CD' | HD'2 | 109.5° | 109.4° |
| HD'1 | CD' | HD'3 | 109.4° | 109.5° |
| HD'2 | CD' | HD'3 | 109.5° | 109.5° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| OP3 | P | OP2 | OP1 | 132.1° | 120.0° |
| OP3 | P | OP2 | O5' | 113.2° | 120.0° |
| OP3 | P | OP1 | O5' | 122.1° | 120.0° |
| OP3 | P | OP2 | HOP2 | 132.1° | 59.9° |
| OP3 | P | O5' | C5' | 45.9° | 65.0° |
| OP2 | P | OP1 | O5' | 112.8° | 120.0° |
| OP2 | P | OP3 | HOP3 | 128.4° | 60.0° |
| OP2 | P | O5' | C5' | 65.9° | 175.0° |
| OP1 | P | OP3 | HOP3 | 0.0° | 180.0° |
| OP1 | P | OP2 | HOP2 | 0.0° | 60.1° |
| OP1 | P | O5' | C5' | 174.9° | 55.0° |
| O5' | P | OP3 | HOP3 | 121.5° | 60.0° |
| O5' | P | OP2 | HOP2 | 114.7° | 179.9° |
| P | O5' | C5' | C4' | 179.6° | 180.0° |
| P | O5' | C5' | H5'1 | 59.7° | 60.0° |
| P | O5' | C5' | H5'2 | 60.4° | 60.0° |
| O5' | C5' | C4' | H5'1 | 119.9° | 120.0° |
| O5' | C5' | C4' | H5'2 | 119.9° | 120.0° |
| O5' | C5' | H5'1 | H5'2 | 120.1° | 120.0° |
| O5' | C5' | C4' | O4' | 73.5° | 66.5° |
| O5' | C5' | C4' | C3' | 41.7° | 175.7° |
| O5' | C5' | C4' | H4' | 165.3° | 54.5° |
| C4' | C5' | H5'1 | H5'2 | 120.2° | 120.0° |
| C5' | C4' | O4' | C3' | 122.5° | 119.4° |
| C5' | C4' | O4' | H4' | 120.8° | 121.0° |
| C5' | C4' | C3' | H4' | 123.7° | 121.2° |
| C5' | C4' | O4' | C1' | 145.6° | 145.9° |
| C5' | C4' | C3' | O3' | 80.1° | 119.9° |
| C5' | C4' | C3' | C2' | 157.8° | 121.4° |
| C5' | C4' | C3' | H3' | 43.6° | 2.6° |
| H5'1 | C5' | C4' | O4' | 166.5° | 53.6° |
| H5'1 | C5' | C4' | C3' | 78.3° | 64.2° |
| H5'1 | C5' | C4' | H4' | 45.3° | 174.5° |
| H5'2 | C5' | C4' | O4' | 46.4° | 173.5° |
| H5'2 | C5' | C4' | C3' | 161.6° | 55.7° |
| H5'2 | C5' | C4' | H4' | 74.8° | 65.5° |
| O4' | C4' | C3' | H4' | 117.3° | 119.5° |
| O4' | C4' | C3' | O3' | 160.9° | 120.7° |
| O4' | C4' | C3' | C2' | 38.8° | 2.1° |
| O4' | C4' | C3' | H3' | 75.4° | 116.8° |
| C4' | O4' | C1' | C2' | 2.3° | 40.0° |
| C4' | O4' | C1' | N1 | 115.0° | 158.6° |
| C4' | O4' | C1' | H1' | 122.7° | 78.4° |
| C3' | C4' | O4' | C1' | 23.0° | 26.5° |
| C4' | C3' | O3' | C2' | 116.4° | 114.8° |
| C4' | C3' | O3' | H3' | 123.0° | 122.5° |
| C4' | C3' | C2' | H3' | 114.2° | 118.7° |
| C4' | C3' | O3' | HA | 180.0° | 61.5° |
| C4' | C3' | C2' | O2' | 78.4° | 139.1° |
| C4' | C3' | C2' | C1' | 39.4° | 20.8° |
| C4' | C3' | C2' | H2' | 156.4° | 97.3° |
| H4' | C4' | O4' | C1' | 93.6° | 93.1° |
| H4' | C4' | C3' | O3' | 43.6° | 1.3° |
| H4' | C4' | C3' | C2' | 78.4° | 117.4° |
| H4' | C4' | C3' | H3' | 167.4° | 123.8° |
| O4' | C1' | C2' | C3' | 26.4° | 37.0° |
| O4' | C1' | C2' | O2' | 91.3° | 155.2° |
| O4' | C1' | C2' | N1 | 117.2° | 118.5° |
| O4' | C1' | C2' | H1' | 121.4° | 118.5° |
| O4' | C1' | C2' | H2' | 143.4° | 81.2° |
| O4' | C1' | N1 | H1' | 122.8° | 123.0° |
| O4' | C1' | N1 | C2 | 159.9° | 53.5° |
| O4' | C1' | N1 | C6 | 21.4° | 126.7° |
| O3' | C3' | C2' | H3' | 121.5° | 122.6° |
| O3' | C3' | C2' | O2' | 45.8° | 20.4° |
| O3' | C3' | C2' | C1' | 163.6° | 97.8° |
| O3' | C3' | C2' | H2' | 79.3° | 144.0° |
| C2' | C3' | O3' | HA | 63.6° | 176.3° |
| C3' | C2' | O2' | C1' | 111.5° | 112.7° |
| C3' | C2' | O2' | H2' | 124.2° | 123.6° |
| C3' | C2' | C1' | H2' | 117.1° | 118.2° |
| C3' | C2' | O2' | CA' | 172.9° | 91.4° |
| C3' | C2' | C1' | N1 | 90.9° | 155.5° |
| C3' | C2' | C1' | H1' | 147.7° | 81.5° |
| H3' | C3' | O3' | HA | 57.1° | 61.1° |
| H3' | C3' | C2' | O2' | 167.3° | 102.2° |
| H3' | C3' | C2' | C1' | 74.8° | 139.6° |
| H3' | C3' | C2' | H2' | 42.2° | 21.4° |
| O2' | C2' | C1' | H2' | 125.3° | 123.6° |
| O2' | C2' | C1' | N1 | 151.5° | 86.2° |
| O2' | C2' | C1' | H1' | 30.1° | 36.8° |
| C2' | O2' | CA' | CB' | 159.7° | 180.0° |
| C2' | O2' | CA' | HA'1 | 80.8° | 60.0° |
| C2' | O2' | CA' | HA'2 | 40.2° | 60.0° |
| C1' | C2' | O2' | CA' | 61.4° | 155.8° |
| C2' | C1' | N1 | H1' | 121.0° | 122.9° |
| C2' | C1' | N1 | C2 | 83.8° | 60.6° |
| C2' | C1' | N1 | C6 | 94.9° | 119.2° |
| H2' | C2' | O2' | CA' | 62.9° | 32.2° |
| H2' | C2' | C1' | N1 | 26.2° | 37.4° |
| H2' | C2' | C1' | H1' | 95.2° | 160.3° |
| O2' | CA' | CB' | HA'1 | 119.5° | 120.0° |
| O2' | CA' | CB' | HA'2 | 119.5° | 119.9° |
| O2' | CA' | HA'1 | HA'2 | 121.6° | 119.9° |
| O2' | CA' | CB' | OC' | 170.0° | 65.0° |
| O2' | CA' | CB' | HB'1 | 49.8° | 175.0° |
| O2' | CA' | CB' | HB'2 | 69.8° | 55.1° |
| C1' | N1 | C2 | C6 | 178.7° | 179.8° |
| C1' | N1 | C2 | O2 | 2.7° | 0.0° |
| C1' | N1 | C2 | N3 | 177.4° | 180.0° |
| C1' | N1 | C6 | C5 | 177.9° | 179.7° |
| C1' | N1 | C6 | H6 | 2.1° | 0.1° |
| H1' | C1' | N1 | C2 | 37.1° | 176.5° |
| H1' | C1' | N1 | C6 | 144.2° | 3.7° |
| N1 | C2 | O2 | N3 | 179.8° | 180.0° |
| N1 | C2 | N3 | C4 | 0.9° | 0.0° |
| C2 | N1 | C6 | C5 | 0.7° | 0.5° |
| C2 | N1 | C6 | H6 | 179.3° | 179.7° |
| C6 | N1 | C2 | O2 | 178.6° | 179.8° |
| C6 | N1 | C2 | N3 | 1.2° | 0.2° |
| N1 | C6 | C5 | C4 | 0.0° | 0.5° |
| N1 | C6 | C5 | H6 | 180.0° | 179.8° |
| N1 | C6 | C5 | H5 | 180.0° | 179.7° |
| O2 | C2 | N3 | C4 | 178.9° | 180.0° |
| C2 | N3 | C4 | N4 | 180.0° | 180.0° |
| C2 | N3 | C4 | C5 | 0.2° | 0.0° |
| N3 | C4 | N4 | C5 | 179.9° | 180.0° |
| N3 | C4 | N4 | H4N1 | 0.0° | 0.0° |
| N3 | C4 | N4 | H4N2 | 180.0° | 180.0° |
| N3 | C4 | C5 | C6 | 0.4° | 0.3° |
| N3 | C4 | C5 | H5 | 179.7° | 180.0° |
| C4 | N4 | H4N1 | H4N2 | 180.0° | 180.0° |
| N4 | C4 | C5 | C6 | 179.5° | 179.7° |
| N4 | C4 | C5 | H5 | 0.5° | 0.0° |
| C5 | C4 | N4 | H4N1 | 179.8° | 180.0° |
| C5 | C4 | N4 | H4N2 | 0.1° | 0.0° |
| C4 | C5 | C6 | H5 | 180.0° | 179.8° |
| C4 | C5 | C6 | H6 | 179.9° | 179.7° |
| H5 | C5 | C6 | H6 | 0.0° | 0.1° |
| CB' | CA' | HA'1 | HA'2 | 121.5° | 120.1° |
| CA' | CB' | OC' | HB'1 | 120.2° | 120.0° |
| CA' | CB' | OC' | HB'2 | 120.2° | 120.0° |
| CA' | CB' | HB'1 | HB'2 | 119.4° | 119.9° |
| CA' | CB' | OC' | CD' | 66.4° | 180.0° |
| HA'1 | CA' | CB' | OC' | 70.5° | 55.0° |
| HA'1 | CA' | CB' | HB'1 | 169.3° | 65.1° |
| HA'1 | CA' | CB' | HB'2 | 49.7° | 175.0° |
| HA'2 | CA' | CB' | OC' | 50.5° | 175.1° |
| HA'2 | CA' | CB' | HB'1 | 69.7° | 55.0° |
| HA'2 | CA' | CB' | HB'2 | 170.8° | 64.9° |
| OC' | CB' | HB'1 | HB'2 | 119.3° | 120.0° |
| CB' | OC' | CD' | HD'1 | 180.0° | 59.9° |
| CB' | OC' | CD' | HD'2 | 60.0° | 60.0° |
| CB' | OC' | CD' | HD'3 | 60.0° | 180.0° |
| HB'1 | CB' | OC' | CD' | 53.8° | 60.0° |
| HB'2 | CB' | OC' | CD' | 173.4° | 60.0° |
| OC' | CD' | HD'1 | HD'2 | 120.0° | 120.0° |
| OC' | CD' | HD'1 | HD'3 | 120.0° | 120.1° |
| OC' | CD' | HD'2 | HD'3 | 120.0° | 120.1° |
| HD'1 | CD' | HD'2 | HD'3 | 120.0° | 119.9° |
