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C3X

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2sing1.53Å1.55Å
C1O1sing1.43Å1.44Å
C1O5sing1.42Å1.42Å
C1H1sing1.09Å1.11Å
C2C3sing1.53Å1.53Å
C2O2sing1.43Å1.42Å
C2H2sing1.09Å1.12Å
C3C4sing1.53Å1.54Å
C3O3sing1.43Å1.41Å
C3H3sing1.09Å1.11Å
C4C5sing1.53Å1.54Å
C4O4sing1.43Å1.41Å
C4H4sing1.09Å1.12Å
C5O5sing1.43Å1.43Å
C5H51sing1.09Å1.11Å
C5H52sing1.09Å1.11Å
O1C1'sing1.43Å1.44Å
O2HO2sing0.97Å0.95Å
O3HO3sing0.97Å0.95Å
O4HO4sing0.97Å0.95Å
C1'C2'sing1.53Å1.54Å
C1'H1'1sing1.09Å1.11Å
C1'H1'2sing1.09Å1.11Å
C2'C3'sing1.53Å1.56Å
C2'O'sing1.43Å1.44Å
C2'H2'sing1.09Å1.12Å
C3'O'sing1.43Å2.39Å
C3'H3'1sing1.09Å1.12Å
C3'H3'2sing1.09Å1.11Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1O1110.8°109.4°
C2C1O5110.9°109.9°
C2C1H1106.8°109.4°
C1C2C3110.3°109.1°
C1C2O2110.3°109.6°
C1C2H2107.8°109.5°
O1C1O5106.7°109.4°
O1C1H1110.9°109.3°
C1O1C1'114.9°106.8°
O5C1H1110.8°109.4°
C1O5C5116.4°107.6°
C3C2O2107.9°109.7°
C3C2H2110.3°109.5°
C2C3C4111.3°108.7°
C2C3O3110.0°109.6°
C2C3H3107.6°109.6°
O2C2H2110.3°109.5°
C2O2HO2110.3°106.8°
C4C3O3108.6°109.9°
C4C3H3109.0°109.5°
C3C4C5110.5°109.1°
C3C4O4109.3°109.6°
C3C4H4108.9°109.6°
O3C3H3110.4°109.6°
C3O3HO3110.0°106.9°
C5C4O4109.3°109.6°
C5C4H4108.8°109.6°
C4C5O5109.4°109.8°
C4C5H51112.2°109.4°
C4C5H52112.3°109.4°
O4C4H4110.1°109.5°
C4O4HO4109.2°106.9°
O5C5H51112.2°109.4°
O5C5H52112.2°109.5°
H51C5H5298.2°109.3°
O1C1'C2'114.3°109.5°
O1C1'H1'1110.5°109.5°
O1C1'H1'2110.5°109.5°
C2'C1'H1'1110.4°109.5°
C2'C1'H1'2110.4°109.5°
C1'C2'C3'116.0°117.8°
C1'C2'O'106.6°117.8°
C1'C2'H2'106.0°115.7°
H1'1C1'H1'299.8°109.4°
C3'C2'O'106.0°57.7°
C3'C2'H2'106.6°117.7°
C2'C3'O'35.3°57.6°
C2'C3'H3'1151.2°117.9°
C2'C3'H3'2151.2°117.7°
O'C2'H2'116.0°117.8°
C2'O'C3'38.7°64.7°
O'C3'H3'1151.1°117.8°
O'C3'H3'2151.1°117.8°
H3'1C3'H3'246.4°115.7°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1O1O5120.8°120.4°
C2C1O1H1118.4°119.8°
C2C1O5H1118.4°120.1°
C1C2C3O2120.5°120.0°
C1C2C3H2119.0°119.8°
C1C2O2H2118.9°120.1°
C1C2C3C451.0°53.5°
C1C2C3O3171.5°173.6°
C1C2C3H368.3°66.1°
C2C1O5C558.1°67.5°
C2C1O1C1'131.3°179.7°
C1C2O2HO2180.0°59.9°
O1C1O5H1120.8°119.8°
O1C1C2C3170.0°178.7°
O1C1C2O270.9°58.6°
O1C1C2H249.5°61.5°
O1C1O5C5178.9°172.3°
C1O1C1'C2'167.5°179.9°
C1O1C1'H1'167.3°60.1°
C1O1C1'H1'242.2°59.9°
O5C1C2C351.7°61.1°
O5C1C2O2170.8°178.8°
O5C1C2H268.8°58.6°
C1O5C5C459.4°67.5°
C1O5C5H5165.9°52.6°
C1O5C5H52175.3°172.4°
O5C1O1C1'107.9°59.9°
H1C1C2C369.1°58.9°
H1C1C2O249.9°61.1°
H1C1C2H2170.4°178.7°
H1C1O5C560.3°52.6°
H1C1O1C1'12.9°59.9°
C3C2O2H2120.5°120.2°
C2C3C4O3121.3°119.9°
C2C3C4H3118.5°119.7°
C2C3O3H3118.5°120.3°
C2C3C4C553.1°53.6°
C2C3C4O4173.5°173.5°
C2C3C4H466.3°66.4°
C3C2O2HO259.5°179.7°
C2C3O3HO3180.0°180.0°
O2C2C3C4171.6°173.6°
O2C2C3O368.0°66.4°
O2C2C3H352.3°53.9°
H2C2C3C468.0°66.2°
H2C2C3O352.5°53.8°
H2C2C3H3172.7°174.1°
H2C2O2HO261.0°60.2°
C4C3O3H3119.4°120.4°
C3C4C5O4120.3°119.9°
C3C4C5H4119.5°119.9°
C3C4O4H4119.5°120.2°
C3C4C5O554.8°61.2°
C3C4C5H5170.5°58.9°
C3C4C5H52180.0°178.7°
C4C3O3HO357.9°60.7°
C3C4O4HO4179.9°179.8°
O3C3C4C5174.4°173.5°
O3C3C4O465.3°66.5°
O3C3C4H455.0°53.6°
H3C3C4C565.3°66.1°
H3C3C4O455.0°53.9°
H3C3C4H4175.3°174.0°
H3C3O3HO361.5°59.7°
C5C4O4H4119.4°120.2°
C4C5O5H51125.3°120.1°
C4C5O5H52125.3°120.1°
C4C5H51H52118.2°119.8°
C5C4O4HO458.9°60.1°
O4C4C5O5175.1°178.9°
O4C4C5H5149.8°61.0°
O4C4C5H5259.7°58.7°
H4C4C5O564.7°58.8°
H4C4C5H51170.1°178.9°
H4C4C5H5260.6°61.4°
H4C4O4HO460.6°60.1°
O5C5H51H52118.1°119.9°
O1C1'C2'H1'1125.3°120.0°
O1C1'C2'H1'2125.3°120.1°
O1C1'H1'1H1'2116.3°120.0°
O1C1'C2'C3'46.2°178.7°
O1C1'C2'O'163.9°112.6°
O1C1'C2'H2'71.9°34.4°
C2'C1'H1'1H1'2116.2°120.0°
C1'C2'C3'O'118.1°106.9°
C1'C2'C3'H2'117.7°146.2°
C1'C2'O'H2'117.7°146.3°
C1'C2'C3'H3'1116.7°146.3°
C1'C2'C3'H3'27.2°0.1°
H1'1C1'C2'C3'79.1°61.3°
H1'1C1'C2'O'38.7°127.4°
H1'1C1'C2'H2'162.8°85.6°
H1'2C1'C2'C3'171.5°58.6°
H1'2C1'C2'O'70.8°7.5°
H1'2C1'C2'H2'53.4°154.5°
C3'C2'O'H2'118.1°106.8°
C2'C3'O'H3'1125.3°106.9°
C2'C3'O'H3'2125.3°106.8°
C2'C3'H3'1H3'2141.1°147.0°
H2'C2'C3'H3'11.0°0.1°
H2'C2'C3'H3'2110.6°146.3°
O'C3'H3'1H3'2141.1°147.0°

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PDB entries from 2024-08-07

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