C3P
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| P | O1P | doub | 1.48Å | 1.49Å | |
| P | O2P | sing | 1.61Å | 1.51Å | |
| P | O3P | sing | 1.61Å | 1.49Å | |
| P | O3' | sing | 1.61Å | 1.61Å | |
| O2P | HOP2 | sing | 0.97Å | 0.95Å | |
| O3P | HOP3 | sing | 0.97Å | 0.95Å | |
| O5' | C5' | sing | 1.43Å | 1.42Å | |
| O5' | HO5' | sing | 0.97Å | 0.95Å | |
| C5' | C4' | sing | 1.53Å | 1.55Å | |
| C5' | H5'1 | sing | 1.09Å | 1.11Å | |
| C5' | H5'2 | sing | 1.09Å | 1.12Å | |
| C4' | O4' | sing | 1.44Å | 1.47Å | |
| C4' | C3' | sing | 1.54Å | 1.50Å | |
| C4' | H4' | sing | 1.09Å | 1.11Å | |
| O4' | C1' | sing | 1.44Å | 1.42Å | |
| C3' | O3' | sing | 1.43Å | 1.39Å | |
| C3' | C2' | sing | 1.55Å | 1.53Å | |
| C3' | H3' | sing | 1.09Å | 1.11Å | |
| C2' | O2' | sing | 1.43Å | 1.44Å | |
| C2' | C1' | sing | 1.54Å | 1.50Å | |
| C2' | H2'1 | sing | 1.09Å | 1.12Å | |
| O2' | HO2' | sing | 0.97Å | 0.95Å | |
| C1' | N1 | sing | 1.47Å | 1.44Å | |
| C1' | H1' | sing | 1.09Å | 1.12Å | |
| N1 | C2 | sing | 1.35Å | 1.34Å | |
| N1 | C6 | sing | 1.36Å | 1.36Å | |
| C2 | N3 | sing | 1.33Å | 1.34Å | |
| C2 | O2 | doub | 1.22Å | 1.21Å | |
| N3 | C4 | doub | 1.33Å | 1.33Å | |
| C4 | C5 | sing | 1.41Å | 1.39Å | |
| C4 | N4 | sing | 1.38Å | 1.33Å | |
| C5 | C6 | doub | 1.35Å | 1.31Å | |
| C5 | H5 | sing | 1.08Å | 1.10Å | |
| C6 | H6 | sing | 1.08Å | 1.10Å | |
| N4 | HN41 | sing | 0.97Å | 1.02Å | |
| N4 | HN42 | sing | 0.97Å | 1.02Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O1P | P | O2P | 108.2° | 109.5° |
| O1P | P | O3P | 117.3° | 109.4° |
| O1P | P | O3' | 108.2° | 109.5° |
| O2P | P | O3P | 111.5° | 109.5° |
| O2P | P | O3' | 106.8° | 109.6° |
| P | O2P | HOP2 | 108.2° | 106.8° |
| O3P | P | O3' | 104.3° | 109.5° |
| P | O3P | HOP3 | 117.3° | 106.7° |
| P | O3' | C3' | 123.0° | 106.9° |
| C5' | O5' | HO5' | 108.6° | 106.9° |
| O5' | C5' | C4' | 108.7° | 109.6° |
| O5' | C5' | H5'1 | 112.5° | 109.5° |
| O5' | C5' | H5'2 | 112.5° | 109.4° |
| C4' | C5' | H5'1 | 112.5° | 109.5° |
| C4' | C5' | H5'2 | 112.5° | 109.4° |
| C5' | C4' | O4' | 120.8° | 110.3° |
| C5' | C4' | C3' | 114.4° | 110.5° |
| C5' | C4' | H4' | 95.4° | 110.3° |
| H5'1 | C5' | H5'2 | 97.9° | 109.5° |
| O4' | C4' | C3' | 104.8° | 104.8° |
| O4' | C4' | H4' | 106.9° | 110.4° |
| C4' | O4' | C1' | 112.0° | 105.2° |
| C3' | C4' | H4' | 114.5° | 110.4° |
| C4' | C3' | O3' | 115.5° | 110.5° |
| C4' | C3' | C2' | 105.4° | 104.1° |
| C4' | C3' | H3' | 110.0° | 110.5° |
| O4' | C1' | C2' | 105.4° | 104.9° |
| O4' | C1' | N1 | 108.3° | 110.3° |
| O4' | C1' | H1' | 116.4° | 110.4° |
| O3' | C3' | C2' | 114.1° | 110.6° |
| O3' | C3' | H3' | 100.4° | 110.4° |
| C2' | C3' | H3' | 111.4° | 110.6° |
| C3' | C2' | O2' | 112.5° | 110.5° |
| C3' | C2' | C1' | 104.3° | 104.0° |
| C3' | C2' | H2'1 | 124.8° | 110.5° |
| O2' | C2' | C1' | 131.3° | 110.7° |
| O2' | C2' | H2'1 | 86.2° | 110.4° |
| C2' | O2' | HO2' | 112.6° | 106.8° |
| C1' | C2' | H2'1 | 98.3° | 110.5° |
| C2' | C1' | N1 | 118.3° | 110.4° |
| C2' | C1' | H1' | 106.0° | 110.4° |
| N1 | C1' | H1' | 102.9° | 110.3° |
| C1' | N1 | C2 | 117.8° | 119.8° |
| C1' | N1 | C6 | 120.8° | 119.8° |
| C2 | N1 | C6 | 121.3° | 120.4° |
| N1 | C2 | N3 | 118.5° | 121.0° |
| N1 | C2 | O2 | 117.7° | 119.5° |
| N1 | C6 | C5 | 120.4° | 119.3° |
| N1 | C6 | H6 | 121.8° | 120.4° |
| N3 | C2 | O2 | 123.8° | 119.5° |
| C2 | N3 | C4 | 121.2° | 120.7° |
| N3 | C4 | C5 | 119.8° | 119.6° |
| N3 | C4 | N4 | 124.5° | 120.2° |
| C5 | C4 | N4 | 115.7° | 120.2° |
| C4 | C5 | C6 | 118.7° | 119.0° |
| C4 | C5 | H5 | 123.6° | 120.5° |
| C4 | N4 | HN41 | 124.5° | 120.0° |
| C4 | N4 | HN42 | 106.9° | 120.0° |
| C6 | C5 | H5 | 117.7° | 120.5° |
| C5 | C6 | H6 | 117.9° | 120.3° |
| HN41 | N4 | HN42 | 107.0° | 120.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O1P | P | O2P | O3P | 130.4° | 119.9° |
| O1P | P | O2P | O3' | 116.2° | 120.0° |
| O1P | P | O3P | O3' | 119.6° | 120.0° |
| O1P | P | O2P | HOP2 | 180.0° | 59.9° |
| O1P | P | O3P | HOP3 | 180.0° | 180.0° |
| O1P | P | O3' | C3' | 49.2° | 60.0° |
| O2P | P | O3P | O3' | 114.9° | 120.1° |
| O2P | P | O3P | HOP3 | 54.4° | 60.0° |
| O2P | P | O3' | C3' | 67.1° | 180.0° |
| O3P | P | O2P | HOP2 | 49.6° | 60.0° |
| O3P | P | O3' | C3' | 174.7° | 59.9° |
| O3' | P | O2P | HOP2 | 63.8° | 180.0° |
| O3' | P | O3P | HOP3 | 60.4° | 60.1° |
| P | O3' | C3' | C4' | 164.7° | 121.5° |
| P | O3' | C3' | C2' | 72.9° | 123.9° |
| P | O3' | C3' | H3' | 46.4° | 1.1° |
| O5' | C5' | C4' | H5'1 | 125.3° | 120.1° |
| O5' | C5' | C4' | H5'2 | 125.3° | 120.0° |
| O5' | C5' | H5'1 | H5'2 | 118.5° | 119.9° |
| O5' | C5' | C4' | O4' | 84.6° | 61.4° |
| O5' | C5' | C4' | C3' | 148.7° | 176.8° |
| O5' | C5' | C4' | H4' | 28.7° | 60.8° |
| HO5' | O5' | C5' | C4' | 180.0° | 180.0° |
| HO5' | O5' | C5' | H5'1 | 54.8° | 59.9° |
| HO5' | O5' | C5' | H5'2 | 54.7° | 60.0° |
| C4' | C5' | H5'1 | H5'2 | 118.4° | 120.0° |
| C5' | C4' | O4' | C3' | 131.0° | 119.0° |
| C5' | C4' | O4' | H4' | 107.2° | 122.1° |
| C5' | C4' | C3' | H4' | 108.6° | 122.3° |
| C5' | C4' | O4' | C1' | 129.6° | 159.5° |
| C5' | C4' | C3' | O3' | 82.5° | 98.3° |
| C5' | C4' | C3' | C2' | 150.6° | 142.9° |
| C5' | C4' | C3' | H3' | 30.3° | 24.2° |
| H5'1 | C5' | C4' | O4' | 40.7° | 178.5° |
| H5'1 | C5' | C4' | C3' | 86.1° | 63.1° |
| H5'1 | C5' | C4' | H4' | 154.0° | 59.3° |
| H5'2 | C5' | C4' | O4' | 150.1° | 58.6° |
| H5'2 | C5' | C4' | C3' | 23.4° | 56.9° |
| H5'2 | C5' | C4' | H4' | 96.6° | 179.2° |
| O4' | C4' | C3' | H4' | 116.8° | 118.9° |
| O4' | C4' | C3' | O3' | 143.0° | 142.8° |
| O4' | C4' | C3' | C2' | 16.0° | 24.1° |
| O4' | C4' | C3' | H3' | 104.3° | 94.6° |
| C4' | O4' | C1' | C2' | 18.5° | 40.5° |
| C4' | O4' | C1' | N1 | 109.1° | 159.4° |
| C4' | O4' | C1' | H1' | 135.6° | 78.5° |
| C3' | C4' | O4' | C1' | 1.3° | 40.5° |
| C4' | C3' | O3' | C2' | 122.4° | 114.7° |
| C4' | C3' | O3' | H3' | 118.3° | 122.6° |
| C4' | C3' | C2' | H3' | 119.3° | 118.7° |
| C4' | C3' | C2' | O2' | 120.6° | 118.8° |
| C4' | C3' | C2' | C1' | 26.8° | 0.1° |
| C4' | C3' | C2' | H2'1 | 137.8° | 118.7° |
| H4' | C4' | O4' | C1' | 123.2° | 78.3° |
| H4' | C4' | C3' | O3' | 26.2° | 24.0° |
| H4' | C4' | C3' | C2' | 100.8° | 94.8° |
| H4' | C4' | C3' | H3' | 139.0° | 146.5° |
| O4' | C1' | C2' | C3' | 27.5° | 23.9° |
| O4' | C1' | C2' | O2' | 111.1° | 142.6° |
| O4' | C1' | C2' | N1 | 121.2° | 118.8° |
| O4' | C1' | C2' | H1' | 124.0° | 119.0° |
| O4' | C1' | C2' | H2'1 | 156.7° | 94.7° |
| O4' | C1' | N1 | H1' | 123.8° | 122.3° |
| O4' | C1' | N1 | C2 | 166.1° | 57.1° |
| O4' | C1' | N1 | C6 | 9.8° | 123.0° |
| O3' | C3' | C2' | H3' | 112.9° | 122.7° |
| O3' | C3' | C2' | O2' | 7.2° | 0.1° |
| O3' | C3' | C2' | C1' | 154.6° | 118.7° |
| O3' | C3' | C2' | H2'1 | 94.4° | 122.6° |
| C3' | C2' | O2' | C1' | 136.1° | 114.7° |
| C3' | C2' | O2' | H2'1 | 126.2° | 122.6° |
| C3' | C2' | C1' | H2'1 | 129.2° | 118.6° |
| C3' | C2' | O2' | HO2' | 180.0° | 180.0° |
| C3' | C2' | C1' | N1 | 93.7° | 142.7° |
| C3' | C2' | C1' | H1' | 151.5° | 95.0° |
| H3' | C3' | C2' | O2' | 120.0° | 122.5° |
| H3' | C3' | C2' | C1' | 92.5° | 118.6° |
| H3' | C3' | C2' | H2'1 | 18.5° | 0.0° |
| O2' | C2' | C1' | H2'1 | 92.2° | 122.7° |
| O2' | C2' | C1' | N1 | 127.7° | 98.6° |
| O2' | C2' | C1' | H1' | 12.9° | 23.7° |
| C1' | C2' | O2' | HO2' | 43.9° | 65.3° |
| C2' | C1' | N1 | H1' | 116.4° | 122.3° |
| C2' | C1' | N1 | C2 | 74.1° | 58.3° |
| C2' | C1' | N1 | C6 | 110.0° | 121.5° |
| H2'1 | C2' | O2' | HO2' | 53.8° | 57.4° |
| H2'1 | C2' | C1' | N1 | 35.5° | 24.1° |
| H2'1 | C2' | C1' | H1' | 79.3° | 146.3° |
| C1' | N1 | C2 | C6 | 175.9° | 179.8° |
| C1' | N1 | C2 | N3 | 174.8° | 180.0° |
| C1' | N1 | C2 | O2 | 3.9° | 0.2° |
| C1' | N1 | C6 | C5 | 178.1° | 179.8° |
| C1' | N1 | C6 | H6 | 1.9° | 0.0° |
| H1' | C1' | N1 | C2 | 42.3° | 179.4° |
| H1' | C1' | N1 | C6 | 133.6° | 0.8° |
| N1 | C2 | N3 | O2 | 178.6° | 179.8° |
| N1 | C2 | N3 | C4 | 2.9° | 0.1° |
| C2 | N1 | C6 | C5 | 2.3° | 0.4° |
| C2 | N1 | C6 | H6 | 177.7° | 179.9° |
| C6 | N1 | C2 | N3 | 1.1° | 0.2° |
| C6 | N1 | C2 | O2 | 179.8° | 180.0° |
| N1 | C6 | C5 | C4 | 3.8° | 0.5° |
| N1 | C6 | C5 | H6 | 180.0° | 179.7° |
| N1 | C6 | C5 | H5 | 176.2° | 180.0° |
| C2 | N3 | C4 | C5 | 1.4° | 0.3° |
| C2 | N3 | C4 | N4 | 180.0° | 179.9° |
| O2 | C2 | N3 | C4 | 178.5° | 180.0° |
| N3 | C4 | C5 | N4 | 178.7° | 179.8° |
| N3 | C4 | C5 | C6 | 2.0° | 0.5° |
| N3 | C4 | C5 | H5 | 178.0° | 180.0° |
| N3 | C4 | N4 | HN41 | 180.0° | 0.0° |
| N3 | C4 | N4 | HN42 | 54.7° | 179.7° |
| C4 | C5 | C6 | H5 | 180.0° | 179.5° |
| C4 | C5 | C6 | H6 | 176.2° | 179.7° |
| C5 | C4 | N4 | HN41 | 1.4° | 179.8° |
| C5 | C4 | N4 | HN42 | 123.9° | 0.5° |
| N4 | C4 | C5 | C6 | 176.7° | 179.7° |
| N4 | C4 | C5 | H5 | 3.3° | 0.3° |
| C4 | N4 | HN41 | HN42 | 125.3° | 179.7° |
| H5 | C5 | C6 | H6 | 3.8° | 0.3° |
