C37

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
O3P	P	sing	1.61Å	1.49Å
O3P	H3P	sing	0.97Å	0.95Å
P	O1P	doub	1.48Å	1.49Å
P	O2P	sing	1.61Å	1.62Å
P	O5'	sing	1.61Å	1.61Å
O2P	H2P	sing	0.97Å	0.95Å
O5'	C5'	sing	1.43Å	1.42Å
C5'	C4'	sing	1.53Å	1.57Å
C5'	H5'1	sing	1.09Å	1.12Å
C5'	H5'2	sing	1.09Å	1.12Å
C4'	O4'	sing	1.45Å	1.37Å
C4'	C3'	sing	1.55Å	1.50Å
C4'	H4'	sing	1.09Å	1.12Å
O4'	C1'	sing	1.44Å	1.39Å
C3'	O3'	sing	1.43Å	1.44Å
C3'	C2'	sing	1.55Å	1.52Å
C3'	H3'	sing	1.09Å	1.11Å
O3'	HA	sing	0.97Å	0.95Å
C2'	C1'	sing	1.54Å	1.45Å
C2'	H2'1	sing	1.09Å	1.12Å
C2'	H2'2	sing	1.09Å	1.11Å
C1'	N1	sing	1.47Å	1.47Å
C1'	H1'	sing	1.09Å	1.11Å
N1	C2	sing	1.34Å	1.35Å
N1	C6	sing	1.37Å	1.36Å
C2	O2	doub	1.22Å	1.25Å
C2	N3	sing	1.33Å	1.39Å
N3	C4	doub	1.33Å	1.34Å
C4	N4	sing	1.38Å	1.36Å
C4	C5	sing	1.41Å	1.37Å
N4	H4N1	sing	0.97Å	1.02Å
N4	H4N2	sing	0.97Å	1.02Å
C5	C6	doub	1.35Å	1.32Å
C5	F	sing	1.35Å	1.42Å
C6	H6	sing	1.08Å	1.10Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
P	O3P	H3P	118.0°	106.8°
O3P	P	O1P	118.0°	109.5°
O3P	P	O2P	108.1°	109.5°
O3P	P	O5'	108.4°	109.5°
O1P	P	O2P	108.3°	109.5°
O1P	P	O5'	112.5°	109.4°
O2P	P	O5'	100.0°	109.4°
P	O2P	H2P	108.1°	106.9°
P	O5'	C5'	118.6°	106.8°
O5'	C5'	C4'	113.1°	109.5°
O5'	C5'	H5'1	110.9°	109.4°
O5'	C5'	H5'2	110.9°	109.5°
C4'	C5'	H5'1	110.9°	109.5°
C4'	C5'	H5'2	110.9°	109.4°
C5'	C4'	O4'	111.0°	110.7°
C5'	C4'	C3'	116.9°	110.7°
C5'	C4'	H4'	112.2°	110.5°
H5'1	C5'	H5'2	99.4°	109.5°
O4'	C4'	C3'	90.7°	103.6°
O4'	C4'	H4'	112.2°	110.5°
C4'	O4'	C1'	103.9°	106.8°
C3'	C4'	H4'	112.2°	110.6°
C4'	C3'	O3'	107.9°	110.9°
C4'	C3'	C2'	104.2°	102.1°
C4'	C3'	H3'	111.1°	110.9°
O4'	C1'	C2'	99.6°	107.5°
O4'	C1'	N1	105.3°	109.8°
O4'	C1'	H1'	111.6°	109.9°
O3'	C3'	C2'	111.5°	110.9°
O3'	C3'	H3'	111.0°	110.8°
C3'	O3'	HA	107.9°	106.8°
C2'	C3'	H3'	111.0°	110.9°
C3'	C2'	C1'	100.2°	104.2°
C3'	C2'	H2'1	115.8°	110.4°
C3'	C2'	H2'2	115.8°	110.5°
C1'	C2'	H2'1	115.8°	110.5°
C1'	C2'	H2'2	115.8°	110.5°
C2'	C1'	N1	116.5°	109.9°
C2'	C1'	H1'	111.5°	109.9°
H2'1	C2'	H2'2	94.7°	110.6°
N1	C1'	H1'	111.5°	109.9°
C1'	N1	C2	118.7°	119.8°
C1'	N1	C6	121.6°	119.8°
C2	N1	C6	119.4°	120.3°
N1	C2	O2	118.6°	119.5°
N1	C2	N3	115.7°	121.1°
N1	C6	C5	124.0°	119.2°
N1	C6	H6	118.0°	120.3°
O2	C2	N3	125.7°	119.4°
C2	N3	C4	125.1°	120.7°
N3	C4	N4	123.4°	120.2°
N3	C4	C5	116.4°	119.6°
N4	C4	C5	120.1°	120.2°
C4	N4	H4N1	123.5°	120.0°
C4	N4	H4N2	120.1°	120.0°
C4	C5	C6	119.3°	119.0°
C4	C5	F	124.1°	120.5°
H4N1	N4	H4N2	116.4°	120.0°
C6	C5	F	115.9°	120.5°
C5	C6	H6	118.0°	120.4°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O3P	P	O1P	O2P	123.1°	120.0°
O3P	P	O1P	O5'	127.4°	120.0°
O3P	P	O2P	O5'	113.2°	120.0°
O3P	P	O2P	H2P	180.0°	60.0°
O3P	P	O5'	C5'	156.9°	180.0°
H3P	O3P	P	O1P	180.0°	60.0°
H3P	O3P	P	O2P	56.8°	60.1°
H3P	O3P	P	O5'	50.6°	180.0°
O1P	P	O2P	O5'	117.9°	120.0°
O1P	P	O2P	H2P	51.1°	180.0°
O1P	P	O5'	C5'	70.8°	59.9°
O2P	P	O5'	C5'	43.9°	60.1°
O5'	P	O2P	H2P	66.8°	60.0°
P	O5'	C5'	C4'	144.2°	180.0°
P	O5'	C5'	H5'1	18.9°	60.0°
P	O5'	C5'	H5'2	90.5°	60.0°
O5'	C5'	C4'	H5'1	125.3°	120.0°
O5'	C5'	C4'	H5'2	125.3°	120.1°
O5'	C5'	H5'1	H5'2	116.8°	120.0°
O5'	C5'	C4'	O4'	35.4°	65.7°
O5'	C5'	C4'	C3'	66.6°	179.9°
O5'	C5'	C4'	H4'	161.8°	57.1°
C4'	C5'	H5'1	H5'2	116.7°	119.9°
C5'	C4'	O4'	C3'	119.2°	118.7°
C5'	C4'	O4'	H4'	126.3°	122.8°
C5'	C4'	C3'	H4'	131.6°	122.8°
C5'	C4'	O4'	C1'	177.5°	158.6°
C5'	C4'	C3'	O3'	83.9°	86.1°
C5'	C4'	C3'	C2'	157.5°	155.7°
C5'	C4'	C3'	H3'	37.9°	37.5°
H5'1	C5'	C4'	O4'	89.9°	174.3°
H5'1	C5'	C4'	C3'	168.1°	60.0°
H5'1	C5'	C4'	H4'	36.5°	62.9°
H5'2	C5'	C4'	O4'	160.7°	54.4°
H5'2	C5'	C4'	C3'	58.6°	60.0°
H5'2	C5'	C4'	H4'	73.0°	177.2°
O4'	C4'	C3'	H4'	114.4°	118.4°
O4'	C4'	C3'	O3'	162.0°	155.2°
O4'	C4'	C3'	C2'	43.4°	36.9°
O4'	C4'	C3'	H3'	76.1°	81.3°
C4'	O4'	C1'	C2'	59.3°	26.4°
C4'	O4'	C1'	N1	179.7°	145.8°
C4'	O4'	C1'	H1'	58.5°	93.2°
C3'	C4'	O4'	C1'	63.2°	39.9°
C4'	C3'	O3'	C2'	113.8°	112.8°
C4'	C3'	O3'	H3'	121.9°	123.6°
C4'	C3'	C2'	H3'	119.6°	118.2°
C4'	C3'	O3'	HA	180.0°	174.2°
C4'	C3'	C2'	C1'	12.1°	20.8°
C4'	C3'	C2'	H2'1	113.1°	97.8°
C4'	C3'	C2'	H2'2	137.4°	139.5°
H4'	C4'	O4'	C1'	51.2°	78.6°
H4'	C4'	C3'	O3'	47.6°	36.8°
H4'	C4'	C3'	C2'	71.0°	81.5°
H4'	C4'	C3'	H3'	169.5°	160.3°
O4'	C1'	C2'	C3'	24.0°	2.0°
O4'	C1'	C2'	N1	112.5°	119.4°
O4'	C1'	C2'	H1'	117.9°	119.6°
O4'	C1'	C2'	H2'1	149.3°	120.6°
O4'	C1'	C2'	H2'2	101.2°	116.7°
O4'	C1'	N1	H1'	121.2°	121.0°
O4'	C1'	N1	C2	173.6°	58.3°
O4'	C1'	N1	C6	0.4°	121.7°
O3'	C3'	C2'	H3'	124.3°	123.6°
O3'	C3'	C2'	C1'	128.2°	139.1°
O3'	C3'	C2'	H2'1	2.9°	20.5°
O3'	C3'	C2'	H2'2	106.6°	102.2°
C2'	C3'	O3'	HA	66.2°	61.5°
C3'	C2'	C1'	H2'1	125.3°	118.6°
C3'	C2'	C1'	H2'2	125.3°	118.7°
C3'	C2'	H2'1	H2'2	121.6°	122.7°
C3'	C2'	C1'	N1	136.5°	121.5°
C3'	C2'	C1'	H1'	93.8°	117.6°
H3'	C3'	O3'	HA	58.2°	62.2°
H3'	C3'	C2'	C1'	107.5°	97.3°
H3'	C3'	C2'	H2'1	127.3°	144.1°
H3'	C3'	C2'	H2'2	17.8°	21.4°
C1'	C2'	H2'1	H2'2	121.6°	122.7°
C2'	C1'	N1	H1'	129.6°	121.0°
C2'	C1'	N1	C2	77.1°	59.6°
C2'	C1'	N1	C6	108.8°	120.3°
H2'1	C2'	C1'	N1	98.2°	119.9°
H2'1	C2'	C1'	H1'	31.4°	1.0°
H2'2	C2'	C1'	N1	11.3°	2.8°
H2'2	C2'	C1'	H1'	140.9°	123.7°
C1'	N1	C2	C6	174.2°	179.9°
C1'	N1	C2	O2	6.0°	0.2°
C1'	N1	C2	N3	173.8°	180.0°
C1'	N1	C6	C5	173.2°	179.8°
C1'	N1	C6	H6	6.8°	0.0°
H1'	C1'	N1	C2	52.5°	179.4°
H1'	C1'	N1	C6	121.6°	0.7°
N1	C2	O2	N3	179.8°	179.9°
N1	C2	N3	C4	0.0°	0.0°
C2	N1	C6	C5	0.8°	0.3°
C2	N1	C6	H6	179.2°	179.9°
C6	N1	C2	O2	179.8°	179.9°
C6	N1	C2	N3	0.4°	0.0°
N1	C6	C5	C4	0.7°	0.5°
N1	C6	C5	H6	180.0°	179.8°
N1	C6	C5	F	170.3°	180.0°
O2	C2	N3	C4	179.8°	179.9°
C2	N3	C4	N4	179.0°	180.0°
C2	N3	C4	C5	0.0°	0.2°
N3	C4	N4	C5	178.9°	179.7°
N3	C4	N4	H4N1	180.0°	0.0°
N3	C4	N4	H4N2	1.1°	179.7°
N3	C4	C5	C6	0.3°	0.5°
N3	C4	C5	F	170.0°	180.0°
C4	N4	H4N1	H4N2	178.9°	179.8°
N4	C4	C5	C6	178.7°	179.8°
N4	C4	C5	F	11.0°	0.3°
C5	C4	N4	H4N1	1.1°	179.7°
C5	C4	N4	H4N2	180.0°	0.5°
C4	C5	C6	F	171.0°	179.5°
C4	C5	C6	H6	179.3°	179.7°
F	C5	C6	H6	9.7°	0.2°

Definition date:	1995-06-03
Last modified:	2011-06-04
Release status:	REL
Processing site:	RCSB