C36
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| OXT | C | sing | 1.42Å | 94.27Å | |
| OXT | HXT | sing | 0.97Å | 0.95Å | |
| O3P | P | sing | 1.62Å | 1.51Å | |
| O3P | H3P | sing | 0.98Å | 0.95Å | |
| P | O1P | doub | 1.50Å | 1.50Å | |
| P | O2P | sing | 1.62Å | 1.59Å | |
| P | O5' | sing | 1.62Å | 1.56Å | |
| O2P | H2P | sing | 0.98Å | 0.95Å | |
| O5' | C5' | sing | 1.42Å | 1.41Å | |
| C5' | C4' | sing | 1.52Å | 1.58Å | |
| C5' | H5'1 | sing | 1.09Å | 1.11Å | |
| C5' | H5'2 | sing | 1.09Å | 1.11Å | |
| C4' | O4' | sing | 1.44Å | 1.43Å | |
| C4' | C3' | sing | 1.52Å | 1.53Å | |
| C4' | H4' | sing | 1.09Å | 1.12Å | |
| O4' | C1' | sing | 1.44Å | 1.42Å | |
| C3' | O3' | sing | 1.43Å | 1.45Å | |
| C3' | C2' | sing | 1.51Å | 1.53Å | |
| C3' | H3' | sing | 1.09Å | 1.11Å | |
| O3' | HA | sing | 0.97Å | 0.95Å | |
| C2' | C1' | sing | 1.52Å | 1.47Å | |
| C2' | H2'1 | sing | 1.10Å | 1.11Å | |
| C2' | H2'2 | sing | 1.10Å | 1.11Å | |
| C1' | N1 | sing | 1.47Å | 1.51Å | |
| C1' | H1' | sing | 1.10Å | 1.12Å | |
| N1 | C2 | sing | 1.58Å | 1.43Å | |
| N1 | C6 | sing | 1.46Å | 1.33Å | |
| C2 | O2 | doub | 1.22Å | 1.24Å | |
| C2 | N3 | sing | 1.37Å | 1.40Å | |
| N3 | C4 | doub | 1.30Å | 1.35Å | |
| C4 | N4 | sing | 1.37Å | 1.33Å | |
| C4 | C5 | sing | 1.52Å | 1.39Å | |
| N4 | H4N1 | sing | 0.99Å | 1.02Å | |
| N4 | H4N2 | sing | 0.99Å | 1.02Å | |
| C5 | C6 | sing | 1.52Å | 1.31Å | |
| C5 | F | sing | 1.37Å | 1.19Å | |
| C5 | C | sing | 1.53Å | 1.09Å | |
| C6 | H6 | sing | 1.10Å | 1.10Å | |
| HC1 | C | sing | 1.09Å | 1.10Å | |
| HC2 | C6 | sing | 1.09Å | 1.10Å | |
| HC3 | C | sing | 1.09Å | 1.10Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| C | OXT | HXT | 61.0° | 107.1° |
| OXT | C | C5 | 124.2° | 108.5° |
| OXT | C | HC1 | 104.8° | 109.4° |
| OXT | C | HC3 | 101.3° | 109.3° |
| P | O3P | H3P | 117.8° | 118.9° |
| O3P | P | O1P | 117.8° | 115.3° |
| O3P | P | O2P | 110.3° | 103.3° |
| O3P | P | O5' | 108.9° | 103.7° |
| O1P | P | O2P | 108.4° | 115.0° |
| O1P | P | O5' | 111.5° | 114.9° |
| O2P | P | O5' | 98.2° | 102.9° |
| P | O2P | H2P | 110.3° | 119.0° |
| P | O5' | C5' | 122.5° | 118.5° |
| O5' | C5' | C4' | 110.0° | 108.6° |
| O5' | C5' | H5'1 | 112.0° | 109.2° |
| O5' | C5' | H5'2 | 112.0° | 109.2° |
| C4' | C5' | H5'1 | 112.0° | 110.1° |
| C4' | C5' | H5'2 | 112.0° | 110.1° |
| C5' | C4' | O4' | 113.3° | 107.9° |
| C5' | C4' | C3' | 110.6° | 112.9° |
| C5' | C4' | H4' | 110.9° | 109.4° |
| H5'1 | C5' | H5'2 | 98.4° | 109.6° |
| O4' | C4' | C3' | 99.8° | 106.3° |
| O4' | C4' | H4' | 110.9° | 107.9° |
| C4' | O4' | C1' | 111.1° | 109.3° |
| C3' | C4' | H4' | 110.9° | 112.2° |
| C4' | C3' | O3' | 108.9° | 108.7° |
| C4' | C3' | C2' | 100.7° | 102.9° |
| C4' | C3' | H3' | 112.1° | 114.0° |
| O4' | C1' | C2' | 104.5° | 106.7° |
| O4' | C1' | N1 | 109.5° | 117.1° |
| O4' | C1' | H1' | 109.1° | 107.2° |
| O3' | C3' | C2' | 110.1° | 109.4° |
| O3' | C3' | H3' | 112.2° | 108.0° |
| C3' | O3' | HA | 109.0° | 106.5° |
| C2' | C3' | H3' | 112.2° | 113.8° |
| C3' | C2' | C1' | 106.5° | 102.2° |
| C3' | C2' | H2'1 | 113.3° | 109.4° |
| C3' | C2' | H2'2 | 113.3° | 113.6° |
| C1' | C2' | H2'1 | 113.3° | 111.3° |
| C1' | C2' | H2'2 | 113.3° | 111.8° |
| C2' | C1' | N1 | 115.5° | 108.9° |
| C2' | C1' | H1' | 109.1° | 110.7° |
| H2'1 | C2' | H2'2 | 97.2° | 108.4° |
| N1 | C1' | H1' | 109.1° | 106.2° |
| C1' | N1 | C2 | 115.9° | 118.5° |
| C1' | N1 | C6 | 123.7° | 123.6° |
| C2 | N1 | C6 | 119.0° | 117.9° |
| N1 | C2 | O2 | 121.5° | 116.3° |
| N1 | C2 | N3 | 118.0° | 116.2° |
| N1 | C6 | C5 | 118.0° | 109.6° |
| N1 | C6 | H6 | 121.0° | 107.3° |
| N1 | C6 | HC2 | 121.4° | 108.8° |
| O2 | C2 | N3 | 120.4° | 127.4° |
| C2 | N3 | C4 | 119.2° | 121.6° |
| N3 | C4 | N4 | 121.3° | 121.9° |
| N3 | C4 | C5 | 116.2° | 122.0° |
| N4 | C4 | C5 | 112.7° | 116.1° |
| C4 | N4 | H4N1 | 105.9° | 118.2° |
| C4 | N4 | H4N2 | 105.9° | 118.2° |
| C4 | C5 | C6 | 124.6° | 109.5° |
| C4 | C5 | F | 98.3° | 110.2° |
| C4 | C5 | C | 67.8° | 110.1° |
| H4N1 | N4 | H4N2 | 103.5° | 123.7° |
| C6 | C5 | F | 135.6° | 106.6° |
| C6 | C5 | C | 112.7° | 113.7° |
| C5 | C6 | H6 | 121.0° | 111.4° |
| C5 | C6 | HC2 | 120.6° | 111.6° |
| F | C5 | C | 70.6° | 106.6° |
| C5 | C | HC1 | 104.8° | 109.9° |
| C5 | C | HC3 | 101.3° | 109.9° |
| H6 | C6 | HC2 | 0.5° | 108.1° |
| HC1 | C | HC3 | 122.0° | 109.7° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| OXT | C | C5 | C4 | 20.2° | 60.4° |
| OXT | C | C5 | C6 | 139.8° | 176.3° |
| OXT | C | C5 | F | 87.9° | 59.0° |
| OXT | C | C5 | HC1 | 120.0° | 119.6° |
| OXT | C | C5 | HC3 | 112.3° | 119.5° |
| OXT | C | HC1 | HC3 | 113.9° | 120.0° |
| HXT | OXT | C | C5 | 158.8° | 9.7° |
| HXT | OXT | C | HC1 | 81.2° | 110.2° |
| HXT | OXT | C | HC3 | 46.5° | 129.5° |
| O3P | P | O1P | O2P | 126.1° | 120.1° |
| O3P | P | O1P | O5' | 126.9° | 120.6° |
| O3P | P | O2P | O5' | 113.7° | 107.7° |
| O3P | P | O2P | H2P | 180.0° | 78.5° |
| O3P | P | O5' | C5' | 149.2° | 53.2° |
| H3P | O3P | P | O1P | 180.0° | 48.8° |
| H3P | O3P | P | O2P | 54.9° | 77.5° |
| H3P | O3P | P | O5' | 51.8° | 175.4° |
| O1P | P | O2P | O5' | 116.0° | 125.8° |
| O1P | P | O2P | H2P | 49.7° | 48.1° |
| O1P | P | O5' | C5' | 17.6° | 180.0° |
| O2P | P | O5' | C5' | 96.0° | 54.2° |
| O5' | P | O2P | H2P | 66.3° | 173.8° |
| P | O5' | C5' | C4' | 153.9° | 180.0° |
| P | O5' | C5' | H5'1 | 80.8° | 59.9° |
| P | O5' | C5' | H5'2 | 28.6° | 59.9° |
| O5' | C5' | C4' | H5'1 | 125.2° | 119.5° |
| O5' | C5' | C4' | H5'2 | 125.3° | 119.5° |
| O5' | C5' | H5'1 | H5'2 | 117.9° | 119.6° |
| O5' | C5' | C4' | O4' | 73.3° | 62.4° |
| O5' | C5' | C4' | C3' | 175.5° | 179.6° |
| O5' | C5' | C4' | H4' | 52.1° | 54.7° |
| C4' | C5' | H5'1 | H5'2 | 117.9° | 121.3° |
| C5' | C4' | O4' | C3' | 117.6° | 121.4° |
| C5' | C4' | O4' | H4' | 125.5° | 118.0° |
| C5' | C4' | C3' | H4' | 123.4° | 124.2° |
| C5' | C4' | O4' | C1' | 156.4° | 110.5° |
| C5' | C4' | C3' | O3' | 85.1° | 155.1° |
| C5' | C4' | C3' | C2' | 159.1° | 89.0° |
| C5' | C4' | C3' | H3' | 39.7° | 34.7° |
| H5'1 | C5' | C4' | O4' | 161.4° | 57.1° |
| H5'1 | C5' | C4' | C3' | 50.3° | 60.1° |
| H5'1 | C5' | C4' | H4' | 73.1° | 174.2° |
| H5'2 | C5' | C4' | O4' | 51.9° | 178.1° |
| H5'2 | C5' | C4' | C3' | 59.2° | 60.9° |
| H5'2 | C5' | C4' | H4' | 177.4° | 64.8° |
| O4' | C4' | C3' | H4' | 116.9° | 117.7° |
| O4' | C4' | C3' | O3' | 155.3° | 86.8° |
| O4' | C4' | C3' | C2' | 39.5° | 29.2° |
| O4' | C4' | C3' | H3' | 79.9° | 152.8° |
| C4' | O4' | C1' | C2' | 20.5° | 11.8° |
| C4' | O4' | C1' | N1 | 144.8° | 134.0° |
| C4' | O4' | C1' | H1' | 96.0° | 106.9° |
| C3' | C4' | O4' | C1' | 38.8° | 11.0° |
| C4' | C3' | O3' | C2' | 109.6° | 111.6° |
| C4' | C3' | O3' | H3' | 124.8° | 124.1° |
| C4' | C3' | C2' | H3' | 119.4° | 123.8° |
| C4' | C3' | O3' | HA | 180.0° | 157.7° |
| C4' | C3' | C2' | C1' | 29.4° | 34.9° |
| C4' | C3' | C2' | H2'1 | 95.9° | 83.1° |
| C4' | C3' | C2' | H2'2 | 154.6° | 155.5° |
| H4' | C4' | O4' | C1' | 78.2° | 131.5° |
| H4' | C4' | C3' | O3' | 38.3° | 30.9° |
| H4' | C4' | C3' | C2' | 77.4° | 146.9° |
| H4' | C4' | C3' | H3' | 163.1° | 89.5° |
| O4' | C1' | C2' | C3' | 7.1° | 29.5° |
| O4' | C1' | C2' | N1 | 120.3° | 127.3° |
| O4' | C1' | C2' | H1' | 116.5° | 116.3° |
| O4' | C1' | C2' | H2'1 | 118.1° | 87.2° |
| O4' | C1' | C2' | H2'2 | 132.4° | 151.3° |
| O4' | C1' | N1 | H1' | 119.2° | 119.6° |
| O4' | C1' | N1 | C2 | 65.2° | 34.2° |
| O4' | C1' | N1 | C6 | 101.4° | 145.5° |
| O3' | C3' | C2' | H3' | 125.7° | 120.8° |
| O3' | C3' | C2' | C1' | 144.3° | 80.4° |
| O3' | C3' | C2' | H2'1 | 19.0° | 161.5° |
| O3' | C3' | C2' | H2'2 | 90.5° | 40.2° |
| C2' | C3' | O3' | HA | 70.5° | 46.1° |
| C3' | C2' | C1' | H2'1 | 125.3° | 116.7° |
| C3' | C2' | C1' | H2'2 | 125.2° | 121.8° |
| C3' | C2' | H2'1 | H2'2 | 119.2° | 124.4° |
| C3' | C2' | C1' | N1 | 113.1° | 156.8° |
| C3' | C2' | C1' | H1' | 123.6° | 86.8° |
| H3' | C3' | O3' | HA | 55.2° | 78.2° |
| H3' | C3' | C2' | C1' | 90.1° | 158.7° |
| H3' | C3' | C2' | H2'1 | 144.7° | 40.6° |
| H3' | C3' | C2' | H2'2 | 35.2° | 80.7° |
| C1' | C2' | H2'1 | H2'2 | 119.2° | 123.4° |
| C2' | C1' | N1 | H1' | 123.2° | 119.2° |
| C2' | C1' | N1 | C2 | 177.2° | 155.3° |
| C2' | C1' | N1 | C6 | 16.1° | 24.4° |
| H2'1 | C2' | C1' | N1 | 121.6° | 40.0° |
| H2'1 | C2' | C1' | H1' | 1.7° | 156.5° |
| H2'2 | C2' | C1' | N1 | 12.1° | 81.4° |
| H2'2 | C2' | C1' | H1' | 111.1° | 35.0° |
| C1' | N1 | C2 | C6 | 167.3° | 179.7° |
| C1' | N1 | C2 | O2 | 8.9° | 1.8° |
| C1' | N1 | C2 | N3 | 173.8° | 176.5° |
| C1' | N1 | C6 | C5 | 176.8° | 146.2° |
| C1' | N1 | C6 | H6 | 3.2° | 92.7° |
| C1' | N1 | C6 | HC2 | 2.9° | 24.0° |
| H1' | C1' | N1 | C2 | 54.0° | 85.4° |
| H1' | C1' | N1 | C6 | 139.4° | 94.9° |
| N1 | C2 | O2 | N3 | 177.3° | 178.2° |
| N1 | C2 | N3 | C4 | 1.4° | 22.2° |
| C2 | N1 | C6 | C5 | 16.9° | 33.5° |
| C2 | N1 | C6 | H6 | 163.0° | 87.6° |
| C2 | N1 | C6 | HC2 | 163.4° | 155.7° |
| C6 | N1 | C2 | O2 | 158.4° | 177.9° |
| C6 | N1 | C2 | N3 | 18.9° | 3.7° |
| N1 | C6 | C5 | C4 | 2.2° | 52.3° |
| N1 | C6 | C5 | H6 | 180.0° | 118.6° |
| N1 | C6 | C5 | HC2 | 179.7° | 120.5° |
| N1 | C6 | C5 | F | 165.0° | 171.5° |
| N1 | C6 | C5 | C | 80.1° | 71.3° |
| N1 | C6 | H6 | HC2 | 144.8° | 117.2° |
| O2 | C2 | N3 | C4 | 175.9° | 159.6° |
| C2 | N3 | C4 | N4 | 159.5° | 179.1° |
| C2 | N3 | C4 | C5 | 16.3° | 0.1° |
| N3 | C4 | N4 | C5 | 144.4° | 179.0° |
| N3 | C4 | N4 | H4N1 | 179.1° | 5.0° |
| N3 | C4 | N4 | H4N2 | 71.4° | 175.0° |
| N3 | C4 | C5 | C6 | 19.4° | 39.4° |
| N3 | C4 | C5 | F | 172.7° | 156.4° |
| N3 | C4 | C5 | C | 122.3° | 86.3° |
| C4 | N4 | H4N1 | H4N2 | 111.2° | 180.0° |
| N4 | C4 | C5 | C6 | 165.7° | 141.6° |
| N4 | C4 | C5 | F | 26.3° | 24.6° |
| N4 | C4 | C5 | C | 91.3° | 92.8° |
| C5 | C4 | N4 | H4N1 | 36.5° | 175.9° |
| C5 | C4 | N4 | H4N2 | 73.0° | 4.1° |
| C4 | C5 | C6 | F | 162.8° | 119.2° |
| C4 | C5 | C6 | C | 77.9° | 123.6° |
| C4 | C5 | F | C | 62.8° | 119.4° |
| C4 | C5 | C6 | H6 | 177.8° | 66.3° |
| C4 | C5 | C | HC1 | 99.8° | 180.0° |
| C4 | C5 | C6 | HC2 | 177.5° | 172.8° |
| C4 | C5 | C | HC3 | 132.5° | 59.1° |
| C6 | C5 | F | C | 103.0° | 121.8° |
| C5 | C6 | H6 | HC2 | 35.2° | 122.9° |
| C6 | C5 | C | HC1 | 19.8° | 56.6° |
| C6 | C5 | C | HC3 | 107.9° | 64.2° |
| F | C5 | C6 | H6 | 15.0° | 52.9° |
| F | C5 | C | HC1 | 152.1° | 60.6° |
| F | C5 | C6 | HC2 | 14.6° | 68.0° |
| F | C5 | C | HC3 | 24.4° | 178.6° |
| C | C5 | C6 | H6 | 100.0° | 170.1° |
| C5 | C | HC1 | HC3 | 113.9° | 120.9° |
| C | C5 | C6 | HC2 | 99.6° | 49.2° |
