C2G
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N1 | C2 | sing | 1.34Å | 1.39Å | Aromatic |
N1 | C6 | sing | 1.36Å | 1.34Å | Aromatic |
N1 | C1' | sing | 1.46Å | 1.49Å | |
C2 | N3 | sing | 1.33Å | 1.36Å | Aromatic |
C2 | O2 | doub | 1.22Å | 1.24Å | |
N3 | C4 | doub | 1.33Å | 1.35Å | Aromatic |
C4 | C5 | sing | 1.41Å | 1.39Å | Aromatic |
C4 | N4 | sing | 1.38Å | 1.33Å | |
C5 | C6 | doub | 1.35Å | 1.39Å | Aromatic |
C5 | HC5 | sing | 1.08Å | 1.10Å | |
C6 | HC6 | sing | 1.08Å | 1.10Å | |
N4 | HN41 | sing | 0.97Å | 1.02Å | |
N4 | HN42 | sing | 0.97Å | 1.02Å | |
C1' | C2' | sing | 1.54Å | 1.49Å | |
C1' | O4' | sing | 1.44Å | 1.41Å | |
C1' | HC1 | sing | 1.09Å | 1.12Å | |
C2' | O2' | sing | 1.43Å | 1.41Å | |
C2' | C3' | sing | 1.55Å | 1.50Å | |
C2' | HC2 | sing | 1.09Å | 1.11Å | |
O2' | HO2 | sing | 0.97Å | 0.95Å | |
C3' | C4' | sing | 1.54Å | 1.53Å | |
C3' | O3' | sing | 1.43Å | 1.42Å | |
C3' | HC3 | sing | 1.09Å | 1.12Å | |
C4' | O4' | sing | 1.44Å | 1.43Å | |
C4' | C5' | sing | 1.53Å | 1.51Å | |
C4' | HC4 | sing | 1.09Å | 1.12Å | |
O3' | HO3 | sing | 0.97Å | 0.95Å | |
C5' | O5' | sing | 1.43Å | 1.42Å | |
C5' | HC51 | sing | 1.09Å | 1.11Å | |
C5' | HC52 | sing | 1.09Å | 1.12Å | |
O5' | PA | sing | 1.61Å | 1.67Å | |
PA | O1A | doub | 1.48Å | 1.56Å | |
PA | O2A | sing | 1.61Å | 1.56Å | |
PA | O3A | sing | 1.61Å | 1.64Å | |
O2A | H2A | sing | 0.97Å | 0.95Å | |
O3A | PB | sing | 1.61Å | 1.65Å | |
PB | O1B | doub | 1.48Å | 1.57Å | |
PB | O2B | sing | 1.61Å | 1.57Å | |
PB | O3B | sing | 1.61Å | 1.65Å | |
O2B | H2B | sing | 0.97Å | 0.95Å | |
O3B | C3G | sing | 1.43Å | 1.43Å | |
O1G | C1G | sing | 1.43Å | 1.43Å | |
O1G | H1G | sing | 0.97Å | 0.95Å | |
C1G | C2G | sing | 1.53Å | 1.49Å | |
C1G | H1G1 | sing | 1.09Å | 1.12Å | |
C1G | H1G2 | sing | 1.09Å | 1.11Å | |
C2G | O2G | sing | 1.43Å | 1.44Å | |
C2G | C3G | sing | 1.53Å | 1.51Å | |
C2G | H2G | sing | 1.09Å | 1.11Å | |
O2G | HOG | sing | 0.97Å | 0.95Å | |
C3G | H3G1 | sing | 1.09Å | 1.12Å | |
C3G | H3G2 | sing | 1.09Å | 1.11Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C2 | N1 | C6 | 115.7° | 120.4° |
C2 | N1 | C1' | 121.5° | 119.8° |
N1 | C2 | N3 | 122.9° | 121.1° |
N1 | C2 | O2 | 122.1° | 119.5° |
C6 | N1 | C1' | 122.7° | 119.8° |
N1 | C6 | C5 | 124.7° | 119.2° |
N1 | C6 | HC6 | 115.8° | 120.4° |
N1 | C1' | C2' | 112.3° | 110.4° |
N1 | C1' | O4' | 110.3° | 110.4° |
N1 | C1' | HC1 | 104.7° | 110.3° |
N3 | C2 | O2 | 115.0° | 119.4° |
C2 | N3 | C4 | 119.4° | 120.7° |
N3 | C4 | C5 | 120.8° | 119.6° |
N3 | C4 | N4 | 117.5° | 120.2° |
C5 | C4 | N4 | 121.7° | 120.2° |
C4 | C5 | C6 | 116.5° | 119.0° |
C4 | C5 | HC5 | 122.1° | 120.5° |
C4 | N4 | HN41 | 117.5° | 120.0° |
C4 | N4 | HN42 | 109.3° | 120.0° |
C6 | C5 | HC5 | 121.5° | 120.5° |
C5 | C6 | HC6 | 119.5° | 120.3° |
HN41 | N4 | HN42 | 109.4° | 120.0° |
C2' | C1' | O4' | 101.1° | 104.9° |
C2' | C1' | HC1 | 113.3° | 110.4° |
C1' | C2' | O2' | 108.9° | 110.8° |
C1' | C2' | C3' | 102.4° | 104.0° |
C1' | C2' | HC2 | 116.5° | 110.4° |
O4' | C1' | HC1 | 115.3° | 110.3° |
C1' | O4' | C4' | 108.0° | 105.3° |
O2' | C2' | C3' | 115.3° | 110.5° |
O2' | C2' | HC2 | 103.9° | 110.5° |
C2' | O2' | HO2 | 109.0° | 106.8° |
C3' | C2' | HC2 | 110.3° | 110.5° |
C2' | C3' | C4' | 103.6° | 104.1° |
C2' | C3' | O3' | 115.2° | 110.5° |
C2' | C3' | HC3 | 108.8° | 110.5° |
C4' | C3' | O3' | 106.3° | 110.6° |
C4' | C3' | HC3 | 117.3° | 110.5° |
C3' | C4' | O4' | 103.9° | 104.9° |
C3' | C4' | C5' | 99.4° | 110.5° |
C3' | C4' | HC4 | 120.6° | 110.3° |
O3' | C3' | HC3 | 106.1° | 110.4° |
C3' | O3' | HO3 | 115.2° | 106.8° |
O4' | C4' | C5' | 114.3° | 110.4° |
O4' | C4' | HC4 | 107.3° | 110.3° |
C5' | C4' | HC4 | 111.3° | 110.3° |
C4' | C5' | O5' | 115.1° | 109.5° |
C4' | C5' | HC51 | 110.1° | 109.5° |
C4' | C5' | HC52 | 110.1° | 109.5° |
O5' | C5' | HC51 | 110.2° | 109.5° |
O5' | C5' | HC52 | 110.2° | 109.4° |
C5' | O5' | PA | 116.2° | 106.8° |
HC51 | C5' | HC52 | 100.1° | 109.5° |
O5' | PA | O1A | 103.6° | 109.4° |
O5' | PA | O2A | 108.7° | 109.5° |
O5' | PA | O3A | 110.7° | 109.5° |
O1A | PA | O2A | 110.7° | 109.5° |
O1A | PA | O3A | 107.3° | 109.4° |
O2A | PA | O3A | 115.2° | 109.5° |
PA | O2A | H2A | 108.7° | 106.8° |
PA | O3A | PB | 117.3° | 106.8° |
O3A | PB | O1B | 108.3° | 109.5° |
O3A | PB | O2B | 110.4° | 109.5° |
O3A | PB | O3B | 104.5° | 109.5° |
O1B | PB | O2B | 112.6° | 109.4° |
O1B | PB | O3B | 107.2° | 109.5° |
O2B | PB | O3B | 113.4° | 109.4° |
PB | O2B | H2B | 110.4° | 106.8° |
PB | O3B | C3G | 120.8° | 106.9° |
O3B | C3G | C2G | 117.0° | 109.5° |
O3B | C3G | H3G1 | 109.5° | 109.5° |
O3B | C3G | H3G2 | 109.5° | 109.5° |
C1G | O1G | H1G | 104.2° | 106.9° |
O1G | C1G | C2G | 104.1° | 109.5° |
O1G | C1G | H1G1 | 114.2° | 109.5° |
O1G | C1G | H1G2 | 114.2° | 109.4° |
C2G | C1G | H1G1 | 114.3° | 109.5° |
C2G | C1G | H1G2 | 114.2° | 109.5° |
C1G | C2G | O2G | 111.4° | 109.5° |
C1G | C2G | C3G | 113.3° | 109.5° |
C1G | C2G | H2G | 105.2° | 109.5° |
H1G1 | C1G | H1G2 | 96.2° | 109.5° |
O2G | C2G | C3G | 108.8° | 109.4° |
O2G | C2G | H2G | 110.1° | 109.5° |
C2G | O2G | HOG | 111.4° | 106.8° |
C3G | C2G | H2G | 108.0° | 109.5° |
C2G | C3G | H3G1 | 109.4° | 109.5° |
C2G | C3G | H3G2 | 109.5° | 109.4° |
H3G1 | C3G | H3G2 | 100.7° | 109.4° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C2 | N1 | C6 | C1' | 176.7° | 179.9° |
N1 | C2 | N3 | O2 | 179.9° | 180.0° |
N1 | C2 | N3 | C4 | 0.0° | 0.0° |
C2 | N1 | C6 | C5 | 0.3° | 0.3° |
C2 | N1 | C6 | HC6 | 179.6° | 180.0° |
C2 | N1 | C1' | C2' | 111.9° | 58.6° |
C2 | N1 | C1' | O4' | 136.1° | 57.0° |
C2 | N1 | C1' | HC1 | 11.5° | 179.2° |
C6 | N1 | C2 | N3 | 0.3° | 0.0° |
C6 | N1 | C2 | O2 | 179.6° | 180.0° |
N1 | C6 | C5 | C4 | 0.0° | 0.6° |
N1 | C6 | C5 | HC6 | 180.0° | 179.7° |
N1 | C6 | C5 | HC5 | 180.0° | 179.9° |
C6 | N1 | C1' | C2' | 71.5° | 121.5° |
C6 | N1 | C1' | O4' | 40.4° | 122.9° |
C6 | N1 | C1' | HC1 | 165.1° | 0.7° |
C1' | N1 | C2 | N3 | 176.5° | 179.9° |
C1' | N1 | C2 | O2 | 3.6° | 0.1° |
C1' | N1 | C6 | C5 | 176.4° | 179.6° |
C1' | N1 | C6 | HC6 | 3.6° | 0.1° |
N1 | C1' | C2' | O4' | 117.6° | 119.0° |
N1 | C1' | C2' | HC1 | 118.4° | 122.2° |
N1 | C1' | O4' | HC1 | 118.4° | 122.2° |
N1 | C1' | C2' | O2' | 75.8° | 98.5° |
N1 | C1' | C2' | C3' | 161.7° | 142.8° |
N1 | C1' | C2' | HC2 | 41.3° | 24.2° |
N1 | C1' | O4' | C4' | 162.8° | 159.3° |
C2 | N3 | C4 | C5 | 0.3° | 0.3° |
C2 | N3 | C4 | N4 | 179.7° | 180.0° |
O2 | C2 | N3 | C4 | 179.9° | 180.0° |
N3 | C4 | C5 | N4 | 180.0° | 179.6° |
N3 | C4 | C5 | C6 | 0.3° | 0.6° |
N3 | C4 | C5 | HC5 | 179.7° | 180.0° |
N3 | C4 | N4 | HN41 | 180.0° | 0.0° |
N3 | C4 | N4 | HN42 | 54.7° | 179.7° |
C4 | C5 | C6 | HC5 | 180.0° | 179.4° |
C4 | C5 | C6 | HC6 | 179.9° | 179.7° |
C5 | C4 | N4 | HN41 | 0.0° | 179.7° |
C5 | C4 | N4 | HN42 | 125.3° | 0.6° |
N4 | C4 | C5 | C6 | 179.7° | 179.7° |
N4 | C4 | C5 | HC5 | 0.4° | 0.4° |
C4 | N4 | HN41 | HN42 | 125.3° | 179.7° |
HC5 | C5 | C6 | HC6 | 0.1° | 0.4° |
C2' | C1' | O4' | HC1 | 122.6° | 118.9° |
C1' | C2' | O2' | C3' | 114.4° | 114.7° |
C1' | C2' | O2' | HC2 | 124.8° | 122.7° |
C1' | C2' | C3' | HC2 | 124.7° | 118.4° |
C1' | C2' | O2' | HO2 | 180.0° | 176.2° |
C1' | C2' | C3' | C4' | 28.8° | 0.1° |
C1' | C2' | C3' | O3' | 86.9° | 118.9° |
C1' | C2' | C3' | HC3 | 154.2° | 118.5° |
C2' | C1' | O4' | C4' | 43.8° | 40.4° |
O4' | C1' | C2' | O2' | 166.7° | 142.6° |
O4' | C1' | C2' | C3' | 44.1° | 23.8° |
O4' | C1' | C2' | HC2 | 76.3° | 94.7° |
C1' | O4' | C4' | C3' | 25.1° | 40.4° |
C1' | O4' | C4' | C5' | 132.4° | 159.5° |
C1' | O4' | C4' | HC4 | 103.6° | 78.4° |
HC1 | C1' | C2' | O2' | 42.7° | 23.7° |
HC1 | C1' | C2' | C3' | 79.9° | 95.0° |
HC1 | C1' | C2' | HC2 | 159.7° | 146.4° |
HC1 | C1' | O4' | C4' | 78.8° | 78.5° |
O2' | C2' | C3' | HC2 | 117.2° | 122.6° |
O2' | C2' | C3' | C4' | 146.9° | 118.8° |
O2' | C2' | C3' | O3' | 31.3° | 0.1° |
O2' | C2' | C3' | HC3 | 87.6° | 122.5° |
C3' | C2' | O2' | HO2 | 65.6° | 61.5° |
C2' | C3' | C4' | O3' | 121.8° | 118.7° |
C2' | C3' | C4' | HC3 | 119.8° | 118.7° |
C2' | C3' | O3' | HC3 | 120.4° | 122.7° |
C2' | C3' | C4' | O4' | 3.6° | 24.0° |
C2' | C3' | C4' | C5' | 114.5° | 143.0° |
C2' | C3' | C4' | HC4 | 123.7° | 94.8° |
C2' | C3' | O3' | HO3 | 180.0° | 65.2° |
HC2 | C2' | O2' | HO2 | 55.2° | 61.1° |
HC2 | C2' | C3' | C4' | 95.9° | 118.6° |
HC2 | C2' | C3' | O3' | 148.5° | 122.7° |
HC2 | C2' | C3' | HC3 | 29.6° | 0.1° |
C4' | C3' | O3' | HC3 | 125.5° | 122.6° |
C3' | C4' | O4' | C5' | 107.3° | 119.0° |
C3' | C4' | O4' | HC4 | 128.8° | 118.8° |
C3' | C4' | C5' | HC4 | 128.2° | 122.3° |
C4' | C3' | O3' | HO3 | 65.9° | 179.9° |
C3' | C4' | C5' | O5' | 104.7° | 176.9° |
C3' | C4' | C5' | HC51 | 130.0° | 63.1° |
C3' | C4' | C5' | HC52 | 20.6° | 57.0° |
O3' | C3' | C4' | O4' | 118.2° | 142.8° |
O3' | C3' | C4' | C5' | 123.7° | 98.3° |
O3' | C3' | C4' | HC4 | 2.0° | 24.0° |
HC3 | C3' | C4' | O4' | 123.4° | 94.7° |
HC3 | C3' | C4' | C5' | 5.3° | 24.3° |
HC3 | C3' | C4' | HC4 | 116.4° | 146.5° |
HC3 | C3' | O3' | HO3 | 59.6° | 57.4° |
O4' | C4' | C5' | HC4 | 121.7° | 122.2° |
O4' | C4' | C5' | O5' | 5.3° | 61.4° |
O4' | C4' | C5' | HC51 | 120.0° | 178.6° |
O4' | C4' | C5' | HC52 | 130.6° | 58.5° |
C4' | C5' | O5' | HC51 | 125.3° | 120.0° |
C4' | C5' | O5' | HC52 | 125.3° | 120.0° |
C4' | C5' | HC51 | HC52 | 115.9° | 120.0° |
C4' | C5' | O5' | PA | 155.7° | 180.0° |
HC4 | C4' | C5' | O5' | 127.1° | 60.8° |
HC4 | C4' | C5' | HC51 | 1.8° | 59.2° |
HC4 | C4' | C5' | HC52 | 107.6° | 179.3° |
O5' | C5' | HC51 | HC52 | 116.0° | 119.9° |
C5' | O5' | PA | O1A | 123.6° | 60.0° |
C5' | O5' | PA | O2A | 118.7° | 59.9° |
C5' | O5' | PA | O3A | 8.9° | 180.0° |
HC51 | C5' | O5' | PA | 79.0° | 60.0° |
HC52 | C5' | O5' | PA | 30.5° | 60.0° |
O5' | PA | O1A | O2A | 116.3° | 120.0° |
O5' | PA | O1A | O3A | 117.1° | 120.0° |
O5' | PA | O2A | O3A | 124.9° | 120.1° |
O5' | PA | O2A | H2A | 180.0° | 60.1° |
O5' | PA | O3A | PB | 110.9° | 180.0° |
O1A | PA | O2A | O3A | 121.9° | 120.0° |
O1A | PA | O2A | H2A | 66.9° | 180.0° |
O1A | PA | O3A | PB | 136.7° | 60.1° |
O2A | PA | O3A | PB | 13.0° | 60.0° |
O3A | PA | O2A | H2A | 55.1° | 60.0° |
PA | O3A | PB | O1B | 76.1° | 60.0° |
PA | O3A | PB | O2B | 47.6° | 59.9° |
PA | O3A | PB | O3B | 169.9° | 179.9° |
O3A | PB | O1B | O2B | 122.3° | 120.0° |
O3A | PB | O1B | O3B | 112.3° | 120.1° |
O3A | PB | O2B | O3B | 116.9° | 120.1° |
O3A | PB | O2B | H2B | 180.0° | 60.0° |
O3A | PB | O3B | C3G | 165.8° | 180.0° |
O1B | PB | O2B | O3B | 121.9° | 120.0° |
O1B | PB | O2B | H2B | 58.8° | 180.0° |
O1B | PB | O3B | C3G | 51.0° | 59.9° |
O2B | PB | O3B | C3G | 73.9° | 60.0° |
O3B | PB | O2B | H2B | 63.1° | 60.1° |
PB | O3B | C3G | C2G | 175.1° | 179.9° |
PB | O3B | C3G | H3G1 | 59.7° | 60.0° |
PB | O3B | C3G | H3G2 | 49.8° | 60.0° |
O3B | C3G | C2G | C1G | 95.2° | 180.0° |
O3B | C3G | C2G | O2G | 29.3° | 60.0° |
O3B | C3G | C2G | H3G1 | 125.3° | 120.1° |
O3B | C3G | C2G | H3G2 | 125.3° | 120.0° |
O3B | C3G | C2G | H2G | 148.7° | 59.9° |
O3B | C3G | H3G1 | H3G2 | 115.3° | 120.0° |
O1G | C1G | C2G | H1G1 | 125.2° | 120.1° |
O1G | C1G | C2G | H1G2 | 125.3° | 119.9° |
O1G | C1G | H1G1 | H1G2 | 120.1° | 119.9° |
O1G | C1G | C2G | O2G | 61.5° | 60.1° |
O1G | C1G | C2G | C3G | 175.4° | 180.0° |
O1G | C1G | C2G | H2G | 57.7° | 59.9° |
H1G | O1G | C1G | C2G | 180.0° | 180.0° |
H1G | O1G | C1G | H1G1 | 54.7° | 59.9° |
H1G | O1G | C1G | H1G2 | 54.8° | 60.0° |
C2G | C1G | H1G1 | H1G2 | 120.2° | 120.0° |
C1G | C2G | O2G | C3G | 125.6° | 120.0° |
C1G | C2G | O2G | H2G | 116.2° | 120.1° |
C1G | C2G | C3G | H2G | 116.1° | 120.1° |
C1G | C2G | O2G | HOG | 180.0° | 59.9° |
C1G | C2G | C3G | H3G1 | 30.0° | 59.9° |
C1G | C2G | C3G | H3G2 | 139.5° | 60.0° |
H1G1 | C1G | C2G | O2G | 173.3° | 60.0° |
H1G1 | C1G | C2G | C3G | 50.2° | 60.0° |
H1G1 | C1G | C2G | H2G | 67.5° | 180.0° |
H1G2 | C1G | C2G | O2G | 63.7° | 180.0° |
H1G2 | C1G | C2G | C3G | 59.3° | 60.1° |
H1G2 | C1G | C2G | H2G | 177.1° | 60.0° |
O2G | C2G | C3G | H2G | 119.4° | 120.0° |
O2G | C2G | C3G | H3G1 | 154.5° | 60.0° |
O2G | C2G | C3G | H3G2 | 96.0° | 180.0° |
C3G | C2G | O2G | HOG | 54.4° | 60.1° |
C2G | C3G | H3G1 | H3G2 | 115.2° | 119.9° |
H2G | C2G | O2G | HOG | 63.8° | 179.9° |
H2G | C2G | C3G | H3G1 | 86.0° | 180.0° |
H2G | C2G | C3G | H3G2 | 23.4° | 60.0° |