BXY

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
O5	C5	sing	1.43Å	1.22Å
O5	HO5	sing	0.97Å	0.95Å
C5	H51	sing	1.09Å	1.10Å
C5	H52	sing	1.09Å	1.10Å
C4	C5	sing	1.53Å	1.52Å
C4	H4	sing	1.09Å	1.10Å
C3	C4	sing	1.54Å	1.53Å
C3	O3	sing	1.43Å	1.43Å
C3	H3	sing	1.09Å	1.10Å
O3	HO3	sing	0.97Å	0.95Å
C2	C3	sing	1.55Å	1.53Å
C2	H2	sing	1.09Å	1.10Å
O2	C2	sing	1.43Å	1.43Å
O2	HO2	sing	0.97Å	0.95Å
C1	C2	sing	1.55Å	1.53Å
C1	O4	sing	1.45Å	1.43Å
C1	O1	sing	1.43Å	1.43Å
O4	C4	sing	1.44Å	1.42Å
C1	H1	sing	1.09Å	1.10Å
O1	HO1	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
C5	O5	HO5	109.5°	114.0°
O5	C5	H51	109.7°	109.5°
O5	C5	H52	109.9°	109.5°
O5	C5	C4	108.7°	109.5°
H51	C5	H52	108.9°	109.5°
H51	C5	C4	109.7°	109.4°
H52	C5	C4	109.9°	109.5°
C5	C4	H4	109.7°	109.8°
C5	C4	C3	106.0°	109.9°
C5	C4	O4	109.4°	109.9°
H4	C4	C3	115.9°	109.9°
H4	C4	O4	112.9°	109.9°
C4	C3	O3	104.8°	110.5°
C4	C3	H3	115.2°	110.5°
C4	C3	C2	102.5°	104.2°
C3	C4	O4	102.4°	107.4°
O3	C3	H3	113.0°	110.4°
C3	O3	HO3	109.5°	114.0°
O3	C3	C2	105.1°	110.5°
H3	C3	C2	115.0°	110.6°
C3	C2	H2	114.7°	110.9°
C3	C2	O2	106.2°	110.9°
C3	C2	C1	102.8°	102.1°
H2	C2	O2	111.5°	110.8°
H2	C2	C1	114.4°	110.9°
C2	O2	HO2	109.5°	114.0°
O2	C2	C1	106.5°	110.9°
C2	C1	O4	107.1°	103.5°
C2	C1	O1	119.8°	110.6°
C2	C1	H1	106.5°	110.6°
O4	C1	O1	115.8°	110.6°
C1	O4	C4	104.4°	106.8°
O4	C1	H1	111.5°	110.6°
O1	C1	H1	95.3°	110.7°
C1	O1	HO1	109.5°	114.0°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O5	C5	H51	H52	120.3°	120.0°
O5	C5	H51	C4	119.4°	120.0°
O5	C5	H52	C4	119.6°	120.0°
O5	C5	C4	H4	152.9°	54.4°
O5	C5	C4	C3	81.2°	175.3°
O5	C5	C4	O4	28.5°	66.7°
HO5	O5	C5	H51	88.8°	60.0°
HO5	O5	C5	H52	151.5°	60.0°
HO5	O5	C5	C4	31.2°	180.0°
H51	C5	H52	C4	120.2°	120.0°
H51	C5	C4	H4	87.2°	174.3°
H51	C5	C4	C3	38.7°	64.7°
H51	C5	C4	O4	148.5°	53.3°
H52	C5	C4	H4	32.6°	65.7°
H52	C5	C4	C3	158.5°	55.3°
H52	C5	C4	O4	91.8°	173.3°
C5	C4	H4	C3	120.0°	121.0°
C5	C4	H4	O4	122.3°	121.0°
C5	C4	C3	O4	114.6°	119.5°
C5	C4	C3	O3	96.5°	123.9°
C5	C4	C3	H3	28.3°	1.4°
C5	C4	C3	C2	153.9°	117.4°
C5	C4	O4	C1	158.5°	93.0°
H4	C4	C3	O4	123.4°	119.6°
H4	C4	C3	O3	25.5°	2.9°
H4	C4	C3	H3	150.3°	119.6°
H4	C4	C3	C2	84.1°	121.6°
H4	C4	O4	C1	79.0°	146.0°
C4	C3	O3	H3	126.2°	122.5°
C4	C3	O3	C2	107.7°	114.8°
C4	C3	H3	C2	118.9°	114.8°
C4	C3	O3	HO3	40.2°	180.0°
C4	C3	C2	H2	107.0°	97.4°
C4	C3	C2	O2	129.5°	139.1°
C4	C3	C2	C1	17.8°	20.9°
C3	C4	O4	C1	46.4°	26.5°
O3	C3	H3	C2	120.7°	122.7°
O3	C3	C2	H2	2.3°	21.3°
O3	C3	C2	O2	121.2°	102.2°
O3	C3	C2	C1	127.2°	139.6°
O3	C3	C4	O4	148.9°	116.6°
H3	C3	O3	HO3	86.0°	57.5°
H3	C3	C2	H2	127.2°	144.0°
H3	C3	C2	O2	3.7°	20.4°
H3	C3	C2	C1	108.0°	97.8°
H3	C3	C4	O4	86.3°	120.9°
HO3	O3	C3	C2	147.9°	65.3°
C3	C2	H2	O2	120.6°	123.6°
C3	C2	H2	C1	118.5°	112.7°
C3	C2	O2	C1	109.1°	112.7°
C3	C2	O2	HO2	25.2°	180.0°
C3	C2	C1	O4	9.3°	37.0°
C3	C2	C1	O1	125.2°	155.5°
C2	C3	C4	O4	39.3°	2.1°
C3	C2	C1	H1	128.6°	81.5°
H2	C2	O2	C1	125.4°	123.7°
H2	C2	O2	HO2	100.3°	56.4°
H2	C2	C1	O4	134.3°	81.2°
H2	C2	C1	O1	0.2°	37.3°
H2	C2	C1	H1	106.4°	160.3°
O2	C2	C1	O4	102.1°	155.2°
O2	C2	C1	O1	123.4°	86.3°
O2	C2	C1	H1	17.2°	36.7°
HO2	O2	C2	C1	134.3°	67.3°
C2	C1	O4	O1	136.5°	118.5°
C2	C1	O4	H1	116.0°	118.5°
C2	C1	O1	H1	112.4°	122.9°
C2	C1	O4	C4	35.2°	40.0°
C2	C1	O1	HO1	104.4°	179.9°
O4	C1	O1	H1	116.9°	123.0°
O4	C1	O1	HO1	124.9°	66.0°
O1	C1	O4	C4	101.3°	158.5°
C4	O4	C1	H1	151.2°	78.4°
H1	C1	O1	HO1	8.0°	57.0°

Definition date:	2009-06-04
Last modified:	2020-07-17
Release status:	REL
Processing site:	RCSB
Derived from:	3HNS