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BOE

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
POP1doub1.50Å1.49Å
POP2sing1.62Å1.48Å
PO5'sing1.62Å1.58Å
POP3sing1.62Å10.58Å
OP2HOP2sing0.98Å0.95Å
O5'C5'sing1.42Å1.43Å
C5'C4'sing1.52Å1.50Å
C5'H5'sing1.09Å1.12Å
C5'H5''sing1.09Å1.12Å
C4'O4'sing1.44Å1.45Å
C4'C3'sing1.52Å1.52Å
C4'H4'sing1.09Å1.12Å
O4'C1'sing1.44Å1.42Å
C1'N1sing1.43Å1.49Å
C1'C2'sing1.52Å1.53Å
C1'H1'sing1.09Å1.12Å
N1C6sing1.39Å1.38Å
N1C2sing1.41Å1.37Å
C6C5doub1.34Å1.34Å
C6H6sing1.09Å1.10Å
C2O2doub1.23Å1.22Å
C2N3sing1.40Å1.38Å
N3C4sing1.39Å1.38Å
N3HN3sing1.02Å1.02Å
C4O4doub1.23Å1.23Å
C4C5sing1.49Å1.45Å
C5C5Msing1.50Å1.49Å
C5MH71sing1.09Å1.12Å
C5MH72sing1.09Å1.11Å
C5MH73sing1.09Å1.11Å
C2'O2'sing1.41Å1.44Å
C2'C3'sing1.51Å1.52Å
C2'H2'sing1.10Å1.11Å
O2'CB'sing1.42Å1.42Å
CB'CC'sing1.52Å1.52Å
CB'HB'1sing1.09Å1.12Å
CB'HB'2sing1.09Å1.11Å
CC'OD'sing1.42Å1.42Å
CC'HC'1sing1.09Å1.11Å
CC'HC'2sing1.09Å1.11Å
OD'CE'sing1.42Å1.41Å
CE'CF'sing1.50Å1.51Å
CE'HE'1sing1.10Å1.12Å
CE'HE'2sing1.10Å1.11Å
CF'CG'doub1.39Å1.39ÅAromatic
CF'CK'sing1.39Å1.39ÅAromatic
CG'CH'sing1.39Å1.40ÅAromatic
CG'HG'sing1.09Å1.10Å
CH'CI'doub1.39Å1.39ÅAromatic
CH'HH'sing1.09Å1.10Å
CI'CJ'sing1.40Å1.39ÅAromatic
CI'HI'sing1.09Å1.10Å
CJ'CK'doub1.39Å1.39ÅAromatic
CJ'HJ'sing1.09Å1.10Å
CK'HK'sing1.09Å1.10Å
C3'O3'sing1.43Å1.41Å
C3'H3'sing1.09Å1.11Å
O3'HO3'sing0.97Å0.95Å
OP3HOP3sing0.98Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
OP1POP2119.1°115.3°
OP1PO5'105.5°115.0°
OP1POP3111.8°114.9°
OP2PO5'110.1°103.8°
OP2POP384.6°103.3°
POP2HOP2119.1°119.0°
O5'POP327.2°102.9°
PO5'C5'119.6°118.5°
POP3HOP3111.8°119.0°
O5'C5'C4'110.1°108.6°
O5'C5'H5'112.0°109.2°
O5'C5'H5''111.9°109.3°
C4'C5'H5'112.0°110.1°
C4'C5'H5''112.0°110.1°
C5'C4'O4'109.7°108.2°
C5'C4'C3'115.7°113.3°
C5'C4'H4'103.3°109.3°
H5'C5'H5''98.5°109.6°
O4'C4'C3'103.5°105.9°
O4'C4'H4'115.5°107.7°
C4'O4'C1'109.4°109.2°
C3'C4'H4'109.5°112.2°
C4'C3'C2'102.3°102.1°
C4'C3'O3'113.8°107.9°
C4'C3'H3'112.4°114.5°
O4'C1'N1108.8°109.0°
O4'C1'C2'107.4°106.5°
O4'C1'H1'112.1°108.9°
N1C1'C2'111.8°112.5°
N1C1'H1'107.7°107.3°
C1'N1C6123.1°118.5°
C1'N1C2115.6°121.3°
C2'C1'H1'109.1°112.6°
C1'C2'O2'108.6°112.6°
C1'C2'C3'100.9°102.0°
C1'C2'H2'113.7°111.1°
C6N1C2121.3°120.2°
N1C6C5123.3°124.5°
N1C6H6119.8°114.7°
N1C2O2122.0°123.8°
N1C2N3115.2°115.1°
C5C6H6116.9°120.7°
C6C5C4118.3°118.4°
C6C5C5M123.5°123.6°
O2C2N3122.9°121.1°
C2N3C4126.6°127.0°
C2N3HN3116.5°116.4°
C4N3HN3116.9°116.6°
N3C4O4120.3°123.6°
N3C4C5115.3°114.8°
O4C4C5124.3°121.6°
C4C5C5M118.2°118.0°
C5C5MH71107.2°109.7°
C5C5MH72123.5°109.8°
C5C5MH73107.2°109.7°
H71C5MH72107.2°109.4°
H71C5MH73102.5°109.4°
H72C5MH73107.2°108.9°
O2'C2'C3'104.3°112.3°
O2'C2'H2'110.9°108.6°
C2'O2'CB'115.1°111.9°
C3'C2'H2'117.5°110.1°
C2'C3'O3'112.3°110.3°
C2'C3'H3'114.0°114.0°
O2'CB'CC'105.5°109.0°
O2'CB'HB'1113.7°108.1°
O2'CB'HB'2113.7°108.2°
CC'CB'HB'1113.7°111.2°
CC'CB'HB'2113.7°110.5°
CB'CC'OD'102.8°109.0°
CB'CC'HC'1114.7°111.1°
CB'CC'HC'2114.8°110.5°
HB'1CB'HB'296.8°109.7°
OD'CC'HC'1114.8°108.2°
OD'CC'HC'2114.7°108.3°
CC'OD'CE'117.0°111.5°
HC'1CC'HC'295.7°109.7°
OD'CE'CF'107.2°109.0°
OD'CE'HE'1113.1°109.0°
OD'CE'HE'2113.1°109.1°
CF'CE'HE'1113.0°111.0°
CF'CE'HE'2113.0°110.8°
CE'CF'CG'121.1°119.7°
CE'CF'CK'119.7°119.6°
HE'1CE'HE'297.4°107.9°
CG'CF'CK'119.2°120.7°
CF'CG'CH'119.6°119.7°
CF'CG'HG'120.0°120.9°
CF'CK'CJ'120.9°119.6°
CF'CK'HK'119.4°120.9°
CH'CG'HG'120.4°119.4°
CG'CH'CI'121.4°120.0°
CG'CH'HH'119.5°120.1°
CI'CH'HH'119.1°119.9°
CH'CI'CJ'118.8°120.0°
CH'CI'HI'120.6°120.0°
CJ'CI'HI'120.7°120.0°
CI'CJ'CK'120.1°120.0°
CI'CJ'HJ'119.9°120.0°
CK'CJ'HJ'120.1°120.0°
CJ'CK'HK'119.6°119.5°
O3'C3'H3'102.5°107.8°
C3'O3'HO3'113.8°106.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
OP1POP2O5'121.9°126.6°
OP1POP2OP3112.0°126.2°
OP1PO5'OP3107.7°125.8°
OP1POP2HOP2180.0°48.7°
OP1PO5'C5'46.1°179.9°
OP1POP3HOP3180.0°48.0°
OP2PO5'OP321.9°107.4°
OP2PO5'C5'175.7°53.2°
OP2POP3HOP360.8°78.5°
O5'POP2HOP258.1°175.4°
PO5'C5'C4'173.4°180.0°
PO5'C5'H5'48.1°59.9°
PO5'C5'H5''61.4°59.9°
O5'POP3HOP398.6°173.8°
OP3POP2HOP268.0°77.5°
OP3PO5'C5'153.8°54.2°
O5'C5'C4'H5'125.3°119.5°
O5'C5'C4'H5''125.2°119.6°
O5'C5'H5'H5''117.9°119.6°
O5'C5'C4'O4'65.9°62.4°
O5'C5'C4'C3'50.7°179.5°
O5'C5'C4'H4'170.4°54.6°
C4'C5'H5'H5''117.9°121.2°
C5'C4'O4'C3'124.0°121.7°
C5'C4'O4'H4'116.2°118.1°
C5'C4'C3'H4'116.2°124.4°
C5'C4'O4'C1'146.3°109.0°
C5'C4'C3'C2'158.1°86.9°
C5'C4'C3'O3'80.5°156.8°
C5'C4'C3'H3'35.4°36.8°
H5'C5'C4'O4'59.4°57.1°
H5'C5'C4'C3'176.0°60.0°
H5'C5'C4'H4'64.3°174.1°
H5''C5'C4'O4'168.9°178.0°
H5''C5'C4'C3'74.5°60.9°
H5''C5'C4'H4'45.1°65.0°
O4'C4'C3'H4'123.8°117.2°
C4'O4'C1'N1118.6°132.9°
C4'O4'C1'C2'2.6°11.3°
C4'O4'C1'H1'122.4°110.3°
O4'C4'C3'C2'38.1°31.5°
O4'C4'C3'O3'159.4°84.7°
O4'C4'C3'H3'84.6°155.2°
C3'C4'O4'C1'22.2°12.8°
C4'C3'C2'C1'38.5°37.1°
C4'C3'C2'O2'74.1°158.0°
C4'C3'C2'O3'122.4°114.5°
C4'C3'C2'H3'121.6°124.0°
C4'C3'C2'H2'162.7°80.9°
C4'C3'O3'H3'121.7°124.2°
C4'C3'O3'HO3'180.0°15.2°
H4'C4'O4'C1'97.5°133.0°
H4'C4'C3'C2'85.7°148.7°
H4'C4'C3'O3'35.6°32.5°
H4'C4'C3'H3'151.6°87.6°
O4'C1'N1C2'118.4°117.9°
O4'C1'N1H1'121.7°117.7°
O4'C1'C2'H1'121.7°119.3°
O4'C1'N1C624.7°32.3°
O4'C1'N1C2155.5°147.8°
O4'C1'C2'O2'83.2°151.3°
O4'C1'C2'C3'26.1°30.7°
O4'C1'C2'H2'152.9°86.6°
N1C1'C2'H1'119.0°121.4°
C1'N1C6C2179.7°179.9°
C1'N1C6C5178.2°180.0°
C1'N1C6H61.8°0.0°
C1'N1C2O21.0°0.1°
C1'N1C2N3178.8°180.0°
N1C1'C2'O2'157.5°89.4°
N1C1'C2'C3'93.2°150.0°
N1C1'C2'H2'33.6°32.7°
C2'C1'N1C693.7°85.6°
C2'C1'N1C286.0°94.3°
C1'C2'O2'C3'107.0°114.5°
C1'C2'O2'H2'125.6°123.5°
C1'C2'C3'H2'124.2°118.0°
C1'C2'O2'CB'66.0°174.5°
C1'C2'C3'O3'160.9°77.4°
C1'C2'C3'H3'83.1°161.1°
H1'C1'N1C6146.5°150.0°
H1'C1'N1C233.8°30.1°
H1'C1'C2'O2'38.6°32.1°
H1'C1'C2'C3'147.8°88.5°
H1'C1'C2'H2'85.4°154.2°
N1C6C5H6180.0°180.0°
C6N1C2O2179.3°180.0°
C6N1C2N31.0°0.0°
N1C6C5C40.7°0.0°
N1C6C5C5M178.4°180.0°
C2N1C6C51.5°0.0°
C2N1C6H6178.5°180.0°
N1C2O2N3179.7°179.9°
N1C2N3C40.3°0.0°
N1C2N3HN3179.7°179.9°
C6C5C4N30.5°0.0°
C6C5C4O4178.5°180.0°
C6C5C4C5M179.1°180.0°
C6C5C5MH7154.7°64.2°
C6C5C5MH72180.0°56.0°
C6C5C5MH7354.7°175.6°
H6C6C5C4179.3°180.0°
H6C6C5C5M1.6°0.0°
O2C2N3C4179.5°179.9°
O2C2N3HN30.5°0.0°
C2N3C4HN3180.0°179.9°
C2N3C4O4178.0°179.9°
C2N3C4C51.0°0.1°
N3C4O4C5178.9°180.0°
N3C4C5C5M179.6°180.0°
HN3N3C4O42.0°0.0°
HN3N3C4C5179.0°180.0°
O4C4C5C5M0.6°0.0°
C4C5C5MH71124.3°115.8°
C4C5C5MH720.9°124.0°
C4C5C5MH73126.2°4.4°
C5C5MH71H72134.5°120.5°
C5C5MH71H73112.7°120.4°
C5C5MH72H73125.3°120.1°
H71C5MH72H73109.5°119.5°
O2'C2'C3'H2'123.2°121.1°
C2'O2'CB'CC'179.1°179.0°
C2'O2'CB'HB'153.8°60.0°
C2'O2'CB'HB'255.7°58.8°
O2'C2'C3'O3'48.3°43.5°
O2'C2'C3'H3'164.3°78.0°
C3'C2'O2'CB'173.0°60.0°
C2'C3'O3'H3'122.7°125.1°
C2'C3'O3'HO3'64.4°95.6°
H2'C2'O2'CB'59.6°62.0°
H2'C2'C3'O3'74.9°164.6°
H2'C2'C3'H3'41.1°43.1°
O2'CB'CC'HB'1125.3°119.1°
O2'CB'CC'HB'2125.3°118.8°
O2'CB'HB'1HB'2119.6°117.8°
O2'CB'CC'OD'50.7°60.8°
O2'CB'CC'HC'1176.0°180.0°
O2'CB'CC'HC'274.5°58.0°
CC'CB'HB'1HB'2119.6°122.5°
CB'CC'OD'HC'1125.2°121.0°
CB'CC'OD'HC'2125.3°120.2°
CB'CC'HC'1HC'2120.6°122.4°
CB'CC'OD'CE'161.7°179.0°
HB'1CB'CC'OD'74.5°180.0°
HB'1CB'CC'HC'150.7°60.8°
HB'1CB'CC'HC'2160.2°61.1°
HB'2CB'CC'OD'176.0°58.0°
HB'2CB'CC'HC'158.8°61.2°
HB'2CB'CC'HC'250.7°176.9°
OD'CC'HC'1HC'2120.6°117.9°
CC'OD'CE'CF'169.4°180.0°
CC'OD'CE'HE'144.2°58.7°
CC'OD'CE'HE'265.3°58.9°
HC'1CC'OD'CE'36.4°60.0°
HC'2CC'OD'CE'73.1°58.8°
OD'CE'CF'HE'1125.3°120.1°
OD'CE'CF'HE'2125.3°120.1°
OD'CE'HE'1HE'2119.0°118.4°
OD'CE'CF'CG'74.9°90.0°
OD'CE'CF'CK'104.8°90.0°
CF'CE'HE'1HE'2119.0°121.5°
CE'CF'CG'CK'179.7°180.0°
CE'CF'CG'CH'179.5°180.0°
CE'CF'CG'HG'0.5°0.0°
CE'CF'CK'CJ'179.6°180.0°
CE'CF'CK'HK'0.4°0.0°
HE'1CE'CF'CG'159.9°30.1°
HE'1CE'CF'CK'20.5°149.9°
HE'2CE'CF'CG'50.4°149.9°
HE'2CE'CF'CK'130.0°30.1°
CF'CG'CH'HG'180.0°180.0°
CF'CG'CH'CI'0.0°0.0°
CF'CG'CH'HH'180.0°180.0°
CG'CF'CK'CJ'0.1°0.0°
CG'CF'CK'HK'179.9°180.0°
CK'CF'CG'CH'0.1°0.0°
CK'CF'CG'HG'179.9°180.0°
CF'CK'CJ'CI'0.0°0.0°
CF'CK'CJ'HK'180.0°180.0°
CF'CK'CJ'HJ'180.0°180.0°
CG'CH'CI'HH'180.0°180.0°
CG'CH'CI'CJ'0.1°0.0°
CG'CH'CI'HI'179.9°180.0°
HG'CG'CH'CI'180.0°180.0°
HG'CG'CH'HH'0.0°0.0°
CH'CI'CJ'HI'180.0°179.9°
CH'CI'CJ'CK'0.1°0.0°
CH'CI'CJ'HJ'179.9°180.0°
HH'CH'CI'CJ'179.9°179.9°
HH'CH'CI'HI'0.1°0.0°
CI'CJ'CK'HJ'180.0°180.0°
CI'CJ'CK'HK'180.0°180.0°
HI'CI'CJ'CK'179.9°180.0°
HI'CI'CJ'HJ'0.1°0.0°
HJ'CJ'CK'HK'0.0°0.0°
H3'C3'O3'HO3'58.3°139.4°

224931

PDB entries from 2024-09-11

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