BO1
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
S1 | O1 | doub | 1.42Å | 1.44Å | |
S1 | O2A | doub | 1.42Å | 1.44Å | |
S1 | N1 | sing | 1.66Å | 1.60Å | |
S1 | C1A | sing | 1.76Å | 1.75Å | |
N1 | HN11 | sing | 0.97Å | 1.00Å | |
N1 | HN12 | sing | 0.97Å | 1.00Å | |
C1A | C2A | sing | 1.38Å | 1.42Å | Aromatic |
C1A | C6A | doub | 1.38Å | 1.41Å | Aromatic |
C2A | C3A | doub | 1.38Å | 1.39Å | Aromatic |
C2A | H2A | sing | 1.08Å | 1.08Å | |
C3A | C4A | sing | 1.39Å | 1.44Å | Aromatic |
C3A | H3A | sing | 1.08Å | 1.08Å | |
C4A | C5A | doub | 1.39Å | 1.42Å | Aromatic |
C4A | N2 | sing | 1.40Å | 1.39Å | |
C5A | C6A | sing | 1.38Å | 1.39Å | Aromatic |
C5A | H5A | sing | 1.08Å | 1.08Å | |
C6A | H6 | sing | 1.08Å | 1.08Å | |
N2 | C1 | sing | 1.47Å | 1.42Å | |
N2 | HN2 | sing | 0.97Å | 1.00Å | |
C1 | C2 | sing | 1.53Å | 1.53Å | |
C1 | O5 | sing | 1.43Å | 1.48Å | |
C1 | H1 | sing | 1.09Å | 1.10Å | |
C2 | C3 | sing | 1.53Å | 1.53Å | |
C2 | O2 | sing | 1.43Å | 1.43Å | |
C2 | H2 | sing | 1.09Å | 1.10Å | |
C3 | C4 | sing | 1.53Å | 1.51Å | |
C3 | O3 | sing | 1.43Å | 1.43Å | |
C3 | H3 | sing | 1.09Å | 1.10Å | |
C4 | C5 | sing | 1.53Å | 1.55Å | |
C4 | O4 | sing | 1.43Å | 1.43Å | |
C4 | H4 | sing | 1.09Å | 1.10Å | |
C5 | C6 | sing | 1.53Å | 1.50Å | |
C5 | O5 | sing | 1.43Å | 1.46Å | |
C5 | H5 | sing | 1.09Å | 1.10Å | |
C6 | O6 | sing | 1.43Å | 1.42Å | |
C6 | H61 | sing | 1.09Å | 1.10Å | |
C6 | H62 | sing | 1.09Å | 1.10Å | |
O2 | HO2 | sing | 0.97Å | 0.95Å | |
O3 | HO3 | sing | 0.97Å | 0.95Å | |
O4 | HO4 | sing | 0.97Å | 0.95Å | |
O6 | HO6 | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O1 | S1 | O2A | 118.6° | 125.4° |
O1 | S1 | N1 | 107.3° | 105.7° |
O1 | S1 | C1A | 106.1° | 105.8° |
O2A | S1 | N1 | 108.4° | 105.8° |
O2A | S1 | C1A | 107.5° | 105.8° |
N1 | S1 | C1A | 108.6° | 107.4° |
S1 | N1 | HN11 | 109.4° | 120.0° |
S1 | N1 | HN12 | 109.5° | 120.0° |
S1 | C1A | C2A | 121.2° | 119.9° |
S1 | C1A | C6A | 119.4° | 119.9° |
HN11 | N1 | HN12 | 109.5° | 120.1° |
C2A | C1A | C6A | 119.4° | 120.2° |
C1A | C2A | C3A | 120.1° | 120.1° |
C1A | C2A | H2A | 119.9° | 120.0° |
C1A | C6A | C5A | 120.7° | 120.0° |
C1A | C6A | H6 | 119.6° | 120.0° |
C3A | C2A | H2A | 120.0° | 119.9° |
C2A | C3A | C4A | 120.7° | 119.9° |
C2A | C3A | H3A | 119.6° | 120.0° |
C4A | C3A | H3A | 119.6° | 120.1° |
C3A | C4A | C5A | 118.0° | 119.8° |
C3A | C4A | N2 | 123.1° | 120.1° |
C5A | C4A | N2 | 118.9° | 120.1° |
C4A | C5A | C6A | 121.0° | 120.0° |
C4A | C5A | H5A | 119.5° | 120.0° |
C4A | N2 | C1 | 126.2° | 120.0° |
C4A | N2 | HN2 | 104.2° | 120.0° |
C6A | C5A | H5A | 119.5° | 120.0° |
C5A | C6A | H6 | 119.6° | 120.0° |
C1 | N2 | HN2 | 104.2° | 120.0° |
N2 | C1 | C2 | 110.8° | 109.4° |
N2 | C1 | O5 | 109.8° | 109.4° |
N2 | C1 | H1 | 108.4° | 109.4° |
C2 | C1 | O5 | 109.8° | 109.8° |
C2 | C1 | H1 | 108.5° | 109.4° |
C1 | C2 | C3 | 109.3° | 109.0° |
C1 | C2 | O2 | 107.6° | 109.6° |
C1 | C2 | H2 | 111.5° | 109.6° |
O5 | C1 | H1 | 109.5° | 109.4° |
C1 | O5 | C5 | 113.0° | 107.7° |
C3 | C2 | O2 | 111.3° | 109.5° |
C3 | C2 | H2 | 107.8° | 109.5° |
C2 | C3 | C4 | 108.8° | 108.6° |
C2 | C3 | O3 | 108.9° | 109.7° |
C2 | C3 | H3 | 110.5° | 109.7° |
O2 | C2 | H2 | 109.4° | 109.6° |
C2 | O2 | HO2 | 109.5° | 106.8° |
C4 | C3 | O3 | 109.9° | 109.6° |
C4 | C3 | H3 | 109.5° | 109.6° |
C3 | C4 | C5 | 108.9° | 109.0° |
C3 | C4 | O4 | 109.8° | 109.6° |
C3 | C4 | H4 | 109.6° | 109.5° |
O3 | C3 | H3 | 109.3° | 109.6° |
C3 | O3 | HO3 | 109.5° | 106.8° |
C5 | C4 | O4 | 109.5° | 109.6° |
C5 | C4 | H4 | 109.9° | 109.6° |
C4 | C5 | C6 | 113.0° | 109.4° |
C4 | C5 | O5 | 109.6° | 109.8° |
C4 | C5 | H5 | 106.5° | 109.4° |
O4 | C4 | H4 | 109.1° | 109.5° |
C4 | O4 | HO4 | 109.5° | 106.8° |
C6 | C5 | O5 | 107.9° | 109.4° |
C6 | C5 | H5 | 108.2° | 109.4° |
C5 | C6 | O6 | 110.6° | 109.5° |
C5 | C6 | H61 | 108.8° | 109.5° |
C5 | C6 | H62 | 109.1° | 109.5° |
O5 | C5 | H5 | 111.7° | 109.4° |
O6 | C6 | H61 | 108.9° | 109.4° |
O6 | C6 | H62 | 109.1° | 109.5° |
C6 | O6 | HO6 | 109.5° | 106.8° |
H61 | C6 | H62 | 110.3° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O1 | S1 | O2A | N1 | 122.7° | 123.1° |
O1 | S1 | O2A | C1A | 120.2° | 123.2° |
O1 | S1 | N1 | C1A | 114.3° | 112.6° |
O1 | S1 | N1 | HN11 | 28.8° | 7.4° |
O1 | S1 | N1 | HN12 | 148.9° | 172.3° |
O1 | S1 | C1A | C2A | 110.8° | 157.1° |
O1 | S1 | C1A | C6A | 69.0° | 22.6° |
O2A | S1 | N1 | C1A | 116.5° | 112.6° |
O2A | S1 | N1 | HN11 | 158.1° | 127.4° |
O2A | S1 | N1 | HN12 | 81.9° | 52.9° |
O2A | S1 | C1A | C2A | 17.0° | 22.3° |
O2A | S1 | C1A | C6A | 163.2° | 157.4° |
S1 | N1 | HN11 | HN12 | 120.0° | 179.8° |
N1 | S1 | C1A | C2A | 134.1° | 90.3° |
N1 | S1 | C1A | C6A | 46.1° | 90.0° |
C1A | S1 | N1 | HN11 | 85.4° | 120.0° |
C1A | S1 | N1 | HN12 | 34.6° | 59.8° |
S1 | C1A | C2A | C6A | 179.8° | 179.7° |
S1 | C1A | C2A | C3A | 179.8° | 179.7° |
S1 | C1A | C2A | H2A | 0.2° | 0.3° |
S1 | C1A | C6A | C5A | 179.7° | 180.0° |
S1 | C1A | C6A | H6 | 0.3° | 0.0° |
C1A | C2A | C3A | H2A | 180.0° | 179.5° |
C1A | C2A | C3A | C4A | 0.0° | 0.5° |
C1A | C2A | C3A | H3A | 179.9° | 179.7° |
C2A | C1A | C6A | C5A | 0.1° | 0.3° |
C2A | C1A | C6A | H6 | 179.9° | 179.7° |
C6A | C1A | C2A | C3A | 0.0° | 0.6° |
C6A | C1A | C2A | H2A | 180.0° | 180.0° |
C1A | C6A | C5A | C4A | 0.1° | 0.0° |
C1A | C6A | C5A | H6 | 180.0° | 180.0° |
C1A | C6A | C5A | H5A | 179.9° | 180.0° |
C2A | C3A | C4A | H3A | 180.0° | 179.8° |
C2A | C3A | C4A | C5A | 0.1° | 0.2° |
C2A | C3A | C4A | N2 | 179.8° | 179.7° |
H2A | C2A | C3A | C4A | 180.0° | 180.0° |
H2A | C2A | C3A | H3A | 0.0° | 0.2° |
C3A | C4A | C5A | N2 | 179.8° | 179.9° |
C3A | C4A | C5A | C6A | 0.1° | 0.1° |
C3A | C4A | C5A | H5A | 179.9° | 180.0° |
C3A | C4A | N2 | C1 | 12.7° | 0.1° |
C3A | C4A | N2 | HN2 | 132.7° | 179.9° |
H3A | C3A | C4A | C5A | 179.9° | 180.0° |
H3A | C3A | C4A | N2 | 0.2° | 0.1° |
C4A | C5A | C6A | H5A | 180.0° | 180.0° |
C4A | C5A | C6A | H6 | 179.9° | 180.0° |
C5A | C4A | N2 | C1 | 167.0° | 180.0° |
C5A | C4A | N2 | HN2 | 47.0° | 0.0° |
N2 | C4A | C5A | C6A | 179.8° | 180.0° |
N2 | C4A | C5A | H5A | 0.1° | 0.1° |
C4A | N2 | C1 | HN2 | 120.0° | 180.0° |
C4A | N2 | C1 | C2 | 178.8° | 144.8° |
C4A | N2 | C1 | O5 | 59.7° | 94.9° |
C4A | N2 | C1 | H1 | 59.9° | 25.0° |
H5A | C5A | C6A | H6 | 0.1° | 0.0° |
N2 | C1 | C2 | O5 | 121.5° | 120.1° |
N2 | C1 | C2 | H1 | 118.9° | 119.8° |
N2 | C1 | O5 | H1 | 119.0° | 119.9° |
N2 | C1 | C2 | C3 | 179.5° | 178.6° |
N2 | C1 | C2 | O2 | 59.5° | 58.7° |
N2 | C1 | C2 | H2 | 60.5° | 61.6° |
N2 | C1 | O5 | C5 | 179.8° | 172.3° |
HN2 | N2 | C1 | C2 | 58.8° | 35.2° |
HN2 | N2 | C1 | O5 | 179.8° | 85.1° |
HN2 | N2 | C1 | H1 | 60.2° | 155.0° |
C2 | C1 | O5 | H1 | 119.0° | 120.0° |
C1 | C2 | C3 | O2 | 118.7° | 119.9° |
C1 | C2 | C3 | H2 | 121.3° | 119.9° |
C1 | C2 | O2 | H2 | 121.3° | 120.3° |
C1 | C2 | C3 | C4 | 60.4° | 53.8° |
C1 | C2 | C3 | O3 | 179.9° | 173.6° |
C1 | C2 | C3 | H3 | 59.8° | 66.0° |
C2 | C1 | O5 | C5 | 58.2° | 67.6° |
C1 | C2 | O2 | HO2 | 148.7° | 60.4° |
O5 | C1 | C2 | C3 | 58.0° | 61.3° |
O5 | C1 | C2 | O2 | 179.0° | 178.8° |
O5 | C1 | C2 | H2 | 61.0° | 58.5° |
C1 | O5 | C5 | C4 | 58.1° | 67.6° |
C1 | O5 | C5 | C6 | 178.5° | 172.4° |
C1 | O5 | C5 | H5 | 59.7° | 52.5° |
H1 | C1 | C2 | C3 | 61.6° | 58.8° |
H1 | C1 | C2 | O2 | 59.4° | 61.1° |
H1 | C1 | C2 | H2 | 179.4° | 178.6° |
H1 | C1 | O5 | C5 | 60.8° | 52.4° |
C3 | C2 | O2 | H2 | 119.0° | 120.2° |
C2 | C3 | C4 | O3 | 119.1° | 119.8° |
C2 | C3 | C4 | H3 | 120.8° | 119.8° |
C2 | C3 | O3 | H3 | 120.8° | 120.5° |
C2 | C3 | C4 | C5 | 60.1° | 53.8° |
C2 | C3 | C4 | O4 | 180.0° | 173.7° |
C2 | C3 | C4 | H4 | 60.2° | 66.1° |
C3 | C2 | O2 | HO2 | 91.6° | 180.0° |
C2 | C3 | O3 | HO3 | 116.3° | 60.8° |
O2 | C2 | C3 | C4 | 179.1° | 173.7° |
O2 | C2 | C3 | O3 | 61.2° | 66.5° |
O2 | C2 | C3 | H3 | 58.9° | 53.9° |
H2 | C2 | C3 | C4 | 60.9° | 66.1° |
H2 | C2 | C3 | O3 | 58.8° | 53.6° |
H2 | C2 | C3 | H3 | 178.9° | 174.1° |
H2 | C2 | O2 | HO2 | 27.5° | 59.9° |
C4 | C3 | O3 | H3 | 120.2° | 120.3° |
C3 | C4 | C5 | O4 | 120.1° | 120.0° |
C3 | C4 | C5 | H4 | 120.1° | 119.9° |
C3 | C4 | O4 | H4 | 120.1° | 120.2° |
C3 | C4 | C5 | C6 | 178.9° | 178.7° |
C3 | C4 | C5 | O5 | 58.6° | 61.2° |
C3 | C4 | C5 | H5 | 62.4° | 58.8° |
C4 | C3 | O3 | HO3 | 2.8° | 180.0° |
C3 | C4 | O4 | HO4 | 53.3° | 60.4° |
O3 | C3 | C4 | C5 | 179.3° | 173.6° |
O3 | C3 | C4 | O4 | 60.8° | 66.5° |
O3 | C3 | C4 | H4 | 59.0° | 53.7° |
H3 | C3 | C4 | C5 | 60.7° | 66.1° |
H3 | C3 | C4 | O4 | 59.2° | 53.8° |
H3 | C3 | C4 | H4 | 179.0° | 174.0° |
H3 | C3 | O3 | HO3 | 123.0° | 59.7° |
C5 | C4 | O4 | H4 | 120.3° | 120.2° |
C4 | C5 | C6 | O5 | 121.4° | 120.3° |
C4 | C5 | C6 | H5 | 117.6° | 119.8° |
C4 | C5 | O5 | H5 | 117.8° | 120.1° |
C4 | C5 | C6 | O6 | 69.6° | 174.7° |
C4 | C5 | C6 | H61 | 49.9° | 54.7° |
C4 | C5 | C6 | H62 | 170.4° | 65.3° |
C5 | C4 | O4 | HO4 | 66.3° | 180.0° |
O4 | C4 | C5 | C6 | 61.0° | 58.7° |
O4 | C4 | C5 | O5 | 178.7° | 178.8° |
O4 | C4 | C5 | H5 | 57.7° | 61.1° |
H4 | C4 | C5 | C6 | 58.8° | 61.5° |
H4 | C4 | C5 | O5 | 61.5° | 58.6° |
H4 | C4 | C5 | H5 | 177.5° | 178.7° |
H4 | C4 | O4 | HO4 | 173.4° | 59.8° |
C6 | C5 | O5 | H5 | 118.8° | 119.9° |
C5 | C6 | O6 | H61 | 119.5° | 120.0° |
C5 | C6 | O6 | H62 | 120.0° | 120.0° |
C5 | C6 | H61 | H62 | 119.7° | 120.0° |
C5 | C6 | O6 | HO6 | 101.5° | 180.0° |
O5 | C5 | C6 | O6 | 51.7° | 65.0° |
O5 | C5 | C6 | H61 | 171.3° | 175.0° |
O5 | C5 | C6 | H62 | 68.3° | 55.0° |
H5 | C5 | C6 | O6 | 172.7° | 54.9° |
H5 | C5 | C6 | H61 | 67.7° | 65.1° |
H5 | C5 | C6 | H62 | 52.7° | 174.9° |
O6 | C6 | H61 | H62 | 119.7° | 120.0° |
H61 | C6 | O6 | HO6 | 18.0° | 60.0° |
H62 | C6 | O6 | HO6 | 138.5° | 60.0° |