Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

BO1

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
S1O1doub1.42Å1.44Å
S1O2Adoub1.42Å1.44Å
S1N1sing1.66Å1.60Å
S1C1Asing1.76Å1.75Å
N1HN11sing0.97Å1.00Å
N1HN12sing0.97Å1.00Å
C1AC2Asing1.38Å1.42ÅAromatic
C1AC6Adoub1.38Å1.41ÅAromatic
C2AC3Adoub1.38Å1.39ÅAromatic
C2AH2Asing1.08Å1.08Å
C3AC4Asing1.39Å1.44ÅAromatic
C3AH3Asing1.08Å1.08Å
C4AC5Adoub1.39Å1.42ÅAromatic
C4AN2sing1.40Å1.39Å
C5AC6Asing1.38Å1.39ÅAromatic
C5AH5Asing1.08Å1.08Å
C6AH6sing1.08Å1.08Å
N2C1sing1.47Å1.42Å
N2HN2sing0.97Å1.00Å
C1C2sing1.53Å1.53Å
C1O5sing1.43Å1.48Å
C1H1sing1.09Å1.10Å
C2C3sing1.53Å1.53Å
C2O2sing1.43Å1.43Å
C2H2sing1.09Å1.10Å
C3C4sing1.53Å1.51Å
C3O3sing1.43Å1.43Å
C3H3sing1.09Å1.10Å
C4C5sing1.53Å1.55Å
C4O4sing1.43Å1.43Å
C4H4sing1.09Å1.10Å
C5C6sing1.53Å1.50Å
C5O5sing1.43Å1.46Å
C5H5sing1.09Å1.10Å
C6O6sing1.43Å1.42Å
C6H61sing1.09Å1.10Å
C6H62sing1.09Å1.10Å
O2HO2sing0.97Å0.95Å
O3HO3sing0.97Å0.95Å
O4HO4sing0.97Å0.95Å
O6HO6sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1S1O2A118.6°125.4°
O1S1N1107.3°105.7°
O1S1C1A106.1°105.8°
O2AS1N1108.4°105.8°
O2AS1C1A107.5°105.8°
N1S1C1A108.6°107.4°
S1N1HN11109.4°120.0°
S1N1HN12109.5°120.0°
S1C1AC2A121.2°119.9°
S1C1AC6A119.4°119.9°
HN11N1HN12109.5°120.1°
C2AC1AC6A119.4°120.2°
C1AC2AC3A120.1°120.1°
C1AC2AH2A119.9°120.0°
C1AC6AC5A120.7°120.0°
C1AC6AH6119.6°120.0°
C3AC2AH2A120.0°119.9°
C2AC3AC4A120.7°119.9°
C2AC3AH3A119.6°120.0°
C4AC3AH3A119.6°120.1°
C3AC4AC5A118.0°119.8°
C3AC4AN2123.1°120.1°
C5AC4AN2118.9°120.1°
C4AC5AC6A121.0°120.0°
C4AC5AH5A119.5°120.0°
C4AN2C1126.2°120.0°
C4AN2HN2104.2°120.0°
C6AC5AH5A119.5°120.0°
C5AC6AH6119.6°120.0°
C1N2HN2104.2°120.0°
N2C1C2110.8°109.4°
N2C1O5109.8°109.4°
N2C1H1108.4°109.4°
C2C1O5109.8°109.8°
C2C1H1108.5°109.4°
C1C2C3109.3°109.0°
C1C2O2107.6°109.6°
C1C2H2111.5°109.6°
O5C1H1109.5°109.4°
C1O5C5113.0°107.7°
C3C2O2111.3°109.5°
C3C2H2107.8°109.5°
C2C3C4108.8°108.6°
C2C3O3108.9°109.7°
C2C3H3110.5°109.7°
O2C2H2109.4°109.6°
C2O2HO2109.5°106.8°
C4C3O3109.9°109.6°
C4C3H3109.5°109.6°
C3C4C5108.9°109.0°
C3C4O4109.8°109.6°
C3C4H4109.6°109.5°
O3C3H3109.3°109.6°
C3O3HO3109.5°106.8°
C5C4O4109.5°109.6°
C5C4H4109.9°109.6°
C4C5C6113.0°109.4°
C4C5O5109.6°109.8°
C4C5H5106.5°109.4°
O4C4H4109.1°109.5°
C4O4HO4109.5°106.8°
C6C5O5107.9°109.4°
C6C5H5108.2°109.4°
C5C6O6110.6°109.5°
C5C6H61108.8°109.5°
C5C6H62109.1°109.5°
O5C5H5111.7°109.4°
O6C6H61108.9°109.4°
O6C6H62109.1°109.5°
C6O6HO6109.5°106.8°
H61C6H62110.3°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1S1O2AN1122.7°123.1°
O1S1O2AC1A120.2°123.2°
O1S1N1C1A114.3°112.6°
O1S1N1HN1128.8°7.4°
O1S1N1HN12148.9°172.3°
O1S1C1AC2A110.8°157.1°
O1S1C1AC6A69.0°22.6°
O2AS1N1C1A116.5°112.6°
O2AS1N1HN11158.1°127.4°
O2AS1N1HN1281.9°52.9°
O2AS1C1AC2A17.0°22.3°
O2AS1C1AC6A163.2°157.4°
S1N1HN11HN12120.0°179.8°
N1S1C1AC2A134.1°90.3°
N1S1C1AC6A46.1°90.0°
C1AS1N1HN1185.4°120.0°
C1AS1N1HN1234.6°59.8°
S1C1AC2AC6A179.8°179.7°
S1C1AC2AC3A179.8°179.7°
S1C1AC2AH2A0.2°0.3°
S1C1AC6AC5A179.7°180.0°
S1C1AC6AH60.3°0.0°
C1AC2AC3AH2A180.0°179.5°
C1AC2AC3AC4A0.0°0.5°
C1AC2AC3AH3A179.9°179.7°
C2AC1AC6AC5A0.1°0.3°
C2AC1AC6AH6179.9°179.7°
C6AC1AC2AC3A0.0°0.6°
C6AC1AC2AH2A180.0°180.0°
C1AC6AC5AC4A0.1°0.0°
C1AC6AC5AH6180.0°180.0°
C1AC6AC5AH5A179.9°180.0°
C2AC3AC4AH3A180.0°179.8°
C2AC3AC4AC5A0.1°0.2°
C2AC3AC4AN2179.8°179.7°
H2AC2AC3AC4A180.0°180.0°
H2AC2AC3AH3A0.0°0.2°
C3AC4AC5AN2179.8°179.9°
C3AC4AC5AC6A0.1°0.1°
C3AC4AC5AH5A179.9°180.0°
C3AC4AN2C112.7°0.1°
C3AC4AN2HN2132.7°179.9°
H3AC3AC4AC5A179.9°180.0°
H3AC3AC4AN20.2°0.1°
C4AC5AC6AH5A180.0°180.0°
C4AC5AC6AH6179.9°180.0°
C5AC4AN2C1167.0°180.0°
C5AC4AN2HN247.0°0.0°
N2C4AC5AC6A179.8°180.0°
N2C4AC5AH5A0.1°0.1°
C4AN2C1HN2120.0°180.0°
C4AN2C1C2178.8°144.8°
C4AN2C1O559.7°94.9°
C4AN2C1H159.9°25.0°
H5AC5AC6AH60.1°0.0°
N2C1C2O5121.5°120.1°
N2C1C2H1118.9°119.8°
N2C1O5H1119.0°119.9°
N2C1C2C3179.5°178.6°
N2C1C2O259.5°58.7°
N2C1C2H260.5°61.6°
N2C1O5C5179.8°172.3°
HN2N2C1C258.8°35.2°
HN2N2C1O5179.8°85.1°
HN2N2C1H160.2°155.0°
C2C1O5H1119.0°120.0°
C1C2C3O2118.7°119.9°
C1C2C3H2121.3°119.9°
C1C2O2H2121.3°120.3°
C1C2C3C460.4°53.8°
C1C2C3O3179.9°173.6°
C1C2C3H359.8°66.0°
C2C1O5C558.2°67.6°
C1C2O2HO2148.7°60.4°
O5C1C2C358.0°61.3°
O5C1C2O2179.0°178.8°
O5C1C2H261.0°58.5°
C1O5C5C458.1°67.6°
C1O5C5C6178.5°172.4°
C1O5C5H559.7°52.5°
H1C1C2C361.6°58.8°
H1C1C2O259.4°61.1°
H1C1C2H2179.4°178.6°
H1C1O5C560.8°52.4°
C3C2O2H2119.0°120.2°
C2C3C4O3119.1°119.8°
C2C3C4H3120.8°119.8°
C2C3O3H3120.8°120.5°
C2C3C4C560.1°53.8°
C2C3C4O4180.0°173.7°
C2C3C4H460.2°66.1°
C3C2O2HO291.6°180.0°
C2C3O3HO3116.3°60.8°
O2C2C3C4179.1°173.7°
O2C2C3O361.2°66.5°
O2C2C3H358.9°53.9°
H2C2C3C460.9°66.1°
H2C2C3O358.8°53.6°
H2C2C3H3178.9°174.1°
H2C2O2HO227.5°59.9°
C4C3O3H3120.2°120.3°
C3C4C5O4120.1°120.0°
C3C4C5H4120.1°119.9°
C3C4O4H4120.1°120.2°
C3C4C5C6178.9°178.7°
C3C4C5O558.6°61.2°
C3C4C5H562.4°58.8°
C4C3O3HO32.8°180.0°
C3C4O4HO453.3°60.4°
O3C3C4C5179.3°173.6°
O3C3C4O460.8°66.5°
O3C3C4H459.0°53.7°
H3C3C4C560.7°66.1°
H3C3C4O459.2°53.8°
H3C3C4H4179.0°174.0°
H3C3O3HO3123.0°59.7°
C5C4O4H4120.3°120.2°
C4C5C6O5121.4°120.3°
C4C5C6H5117.6°119.8°
C4C5O5H5117.8°120.1°
C4C5C6O669.6°174.7°
C4C5C6H6149.9°54.7°
C4C5C6H62170.4°65.3°
C5C4O4HO466.3°180.0°
O4C4C5C661.0°58.7°
O4C4C5O5178.7°178.8°
O4C4C5H557.7°61.1°
H4C4C5C658.8°61.5°
H4C4C5O561.5°58.6°
H4C4C5H5177.5°178.7°
H4C4O4HO4173.4°59.8°
C6C5O5H5118.8°119.9°
C5C6O6H61119.5°120.0°
C5C6O6H62120.0°120.0°
C5C6H61H62119.7°120.0°
C5C6O6HO6101.5°180.0°
O5C5C6O651.7°65.0°
O5C5C6H61171.3°175.0°
O5C5C6H6268.3°55.0°
H5C5C6O6172.7°54.9°
H5C5C6H6167.7°65.1°
H5C5C6H6252.7°174.9°
O6C6H61H62119.7°120.0°
H61C6O6HO618.0°60.0°
H62C6O6HO6138.5°60.0°

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon