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SummaryGeometryRelated PDB entries

BMV

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
CAJCAFdoub1.38Å1.39ÅAromatic
CAJCAZsing1.38Å1.39ÅAromatic
CAJHAJsing1.08Å1.10Å
CAFCAEsing1.38Å1.39ÅAromatic
CAFHAFsing1.08Å1.10Å
CAECAGdoub1.38Å1.39ÅAromatic
CAEHAEsing1.08Å1.10Å
CAGCAKsing1.38Å1.39ÅAromatic
CAGHAGsing1.08Å1.10Å
CAKCAZdoub1.38Å1.39ÅAromatic
CAKHAKsing1.08Å1.10Å
CAZCARsing1.51Å1.53Å
CARCBEsing1.53Å1.53Å
CARHAR1sing1.09Å1.11Å
CARHAR2sing1.09Å1.11Å
CBECAUsing1.55Å1.53Å
CBENBGsing1.45Å1.47Å
CBEHBEsing1.09Å1.12Å
CAUNBFsing1.46Å1.47Å
CAUHAU1sing1.09Å1.12Å
CAUHAU2sing1.09Å1.12Å
NBFCASsing1.47Å1.47Å
NBFCBDsing1.40Å1.33Å
CASCBAsing1.51Å1.53Å
CASHAS1sing1.09Å1.12Å
CASHAS2sing1.09Å1.11Å
CBACAPdoub1.35Å1.33ÅAromatic
CBANAWsing1.34Å1.33ÅAromatic
CAPNAVsing1.37Å1.33ÅAromatic
CAPHAPsing1.08Å1.10Å
NAVCAOsing1.35Å1.33ÅAromatic
NAVHAVsing0.97Å1.02Å
CAONAWdoub1.30Å1.33ÅAromatic
CAOHAOsing1.08Å1.10Å
CBDCANdoub1.41Å1.39ÅAromatic
CBDCBBsing1.38Å1.39ÅAromatic
CANCAMsing1.37Å1.39ÅAromatic
CANHANsing1.08Å1.10Å
CAMCAYdoub1.40Å1.39ÅAromatic
CAMHAMsing1.08Å1.10Å
CAYCADsing1.43Å1.43Å
CAYCAQsing1.40Å1.39ÅAromatic
CADNAAtrip1.14Å1.14Å
CAQCBBdoub1.38Å1.39ÅAromatic
CAQHAQsing1.08Å1.10Å
CBBCATsing1.50Å1.53Å
CATNBGsing1.47Å1.47Å
CATHAT1sing1.09Å1.12Å
CATHAT2sing1.09Å1.11Å
NBGSBHsing1.66Å1.63Å
SBHOABdoub1.42Å1.50Å
SBHOACdoub1.42Å1.50Å
SBHCBCsing1.76Å1.75Å
CBCCALdoub1.36Å1.33ÅAromatic
CBCSAXsing1.79Å1.71ÅAromatic
CALCAHsing1.38Å1.34ÅAromatic
CALHALsing1.08Å1.10Å
CAHCAIdoub1.36Å1.34ÅAromatic
CAHHAHsing1.08Å1.10Å
CAISAXsing1.79Å1.71ÅAromatic
CAIHAIsing1.08Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
CAFCAJCAZ120.3°120.0°
CAFCAJHAJ119.8°120.0°
CAJCAFCAE120.0°120.0°
CAJCAFHAF120.0°120.0°
CAZCAJHAJ119.9°120.0°
CAJCAZCAK119.7°120.0°
CAJCAZCAR119.7°120.0°
CAECAFHAF120.0°120.0°
CAFCAECAG119.7°120.0°
CAFCAEHAE120.1°120.0°
CAGCAEHAE120.1°120.0°
CAECAGCAK120.3°120.0°
CAECAGHAG119.8°120.0°
CAKCAGHAG119.9°120.0°
CAGCAKCAZ120.0°120.0°
CAGCAKHAK120.0°120.0°
CAZCAKHAK120.0°120.0°
CAKCAZCAR120.6°120.0°
CAZCARCBE111.0°109.5°
CAZCARHAR1111.6°109.5°
CAZCARHAR2111.6°109.4°
CBECARHAR1111.7°109.5°
CBECARHAR2111.7°109.5°
CARCBECAU109.2°109.7°
CARCBENBG106.6°110.1°
CARCBEHBE113.8°109.7°
HAR1CARHAR298.7°109.4°
CAUCBENBG115.6°108.0°
CAUCBEHBE104.5°109.8°
CBECAUNBF113.0°109.5°
CBECAUHAU1110.9°109.4°
CBECAUHAU2110.9°109.3°
NBGCBEHBE107.2°109.6°
CBENBGCAT118.8°116.6°
CBENBGSBH113.0°121.7°
NBFCAUHAU1110.9°109.4°
NBFCAUHAU2110.9°109.6°
CAUNBFCAS115.7°106.7°
CAUNBFCBD123.1°112.0°
HAU1CAUHAU299.4°109.5°
CASNBFCBD120.5°106.7°
NBFCASCBA111.6°109.5°
NBFCASHAS1111.4°109.4°
NBFCASHAS2111.4°109.4°
NBFCBDCAN114.7°113.9°
NBFCBDCBB124.6°127.8°
CBACASHAS1111.4°109.5°
CBACASHAS2111.4°109.5°
CASCBACAP126.2°126.0°
CASCBANAW125.9°126.0°
HAS1CASHAS298.9°109.5°
CAPCBANAW107.9°108.0°
CBACAPNAV108.0°106.8°
CBACAPHAP126.0°126.6°
CBANAWCAO108.1°109.3°
NAVCAPHAP126.0°126.6°
CAPNAVCAO108.1°107.2°
CAPNAVHAV126.0°126.4°
CAONAVHAV125.9°126.4°
NAVCAONAW107.9°108.7°
NAVCAOHAO126.0°125.6°
NAWCAOHAO126.1°125.7°
CANCBDCBB119.1°118.2°
CBDCANCAM120.2°121.3°
CBDCANHAN119.9°119.3°
CBDCBBCAQ121.0°120.9°
CBDCBBCAT127.0°121.2°
CAMCANHAN119.9°119.3°
CANCAMCAY120.2°120.0°
CANCAMHAM119.9°120.0°
CAYCAMHAM119.9°120.0°
CAMCAYCAD120.2°120.5°
CAMCAYCAQ119.8°119.0°
CADCAYCAQ119.9°120.5°
CAYCADNAA179.1°180.0°
CAYCAQCBB119.6°120.5°
CAYCAQHAQ120.3°119.7°
CBBCAQHAQ120.2°119.8°
CAQCBBCAT112.0°117.9°
CBBCATNBG115.4°109.7°
CBBCATHAT1110.1°109.5°
CBBCATHAT2110.1°109.4°
NBGCATHAT1110.1°109.4°
NBGCATHAT2110.0°109.5°
CATNBGSBH115.7°121.7°
HAT1CATHAT2100.1°109.4°
NBGSBHOAB108.9°105.8°
NBGSBHOAC108.8°105.8°
NBGSBHCBC113.2°107.4°
OABSBHOAC107.7°125.3°
OABSBHCBC108.0°105.8°
OACSBHCBC110.1°105.8°
SBHCBCCAL126.0°129.1°
SBHCBCSAX125.6°129.0°
CALCBCSAX108.1°101.9°
CBCCALCAH114.6°119.1°
CBCCALHAL122.5°120.5°
CBCSAXCAI93.6°98.1°
CAHCALHAL122.9°120.4°
CALCAHCAI116.7°119.0°
CALCAHHAH121.7°120.5°
CAICAHHAH121.6°120.5°
CAHCAISAX107.0°102.0°
CAHCAIHAI117.2°129.0°
SAXCAIHAI135.9°129.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
CAFCAJCAZHAJ180.0°179.9°
CAJCAFCAEHAF180.0°179.8°
CAJCAFCAECAG0.0°0.2°
CAJCAFCAEHAE180.0°179.9°
CAFCAJCAZCAK0.2°0.3°
CAFCAJCAZCAR178.2°179.9°
CAZCAJCAFCAE0.2°0.1°
CAZCAJCAFHAF179.8°179.9°
CAJCAZCAKCAG0.1°0.5°
CAJCAZCAKCAR178.4°179.7°
CAJCAZCAKHAK179.8°179.9°
CAJCAZCARCBE83.4°90.0°
CAJCAZCARHAR141.9°30.0°
CAJCAZCARHAR2151.4°150.0°
HAJCAJCAFCAE179.8°180.0°
HAJCAJCAFHAF0.2°0.1°
HAJCAJCAZCAK179.8°179.7°
HAJCAJCAZCAR1.8°0.0°
CAFCAECAGHAE180.0°179.9°
CAFCAECAGCAK0.1°0.1°
CAFCAECAGHAG179.9°180.0°
HAFCAFCAECAG180.0°180.0°
HAFCAFCAEHAE0.0°0.1°
CAECAGCAKHAG180.0°179.9°
CAECAGCAKCAZ0.0°0.4°
CAECAGCAKHAK180.0°180.0°
HAECAECAGCAK179.9°179.8°
HAECAECAGHAG0.1°0.0°
CAGCAKCAZHAK180.0°179.5°
CAGCAKCAZCAR178.3°179.8°
HAGCAGCAKCAZ180.0°179.7°
HAGCAGCAKHAK0.0°0.2°
CAKCAZCARCBE95.1°90.3°
CAKCAZCARHAR1139.6°149.7°
CAKCAZCARHAR230.2°29.7°
HAKCAKCAZCAR1.7°0.3°
CAZCARCBEHAR1125.3°120.1°
CAZCARCBEHAR2125.3°120.0°
CAZCARHAR1HAR2117.5°120.0°
CAZCARCBECAU77.3°180.0°
CAZCARCBENBG48.2°61.3°
CAZCARCBEHBE166.3°59.3°
CBECARHAR1HAR2117.6°120.0°
CARCBECAUNBG120.2°120.0°
CARCBECAUHBE122.2°120.7°
CARCBENBGHBE122.3°120.7°
CARCBECAUNBF177.3°178.1°
CARCBECAUHAU152.0°58.2°
CARCBECAUHAU257.4°61.8°
CARCBENBGCAT107.4°87.6°
CARCBENBGSBH112.1°92.1°
HAR1CARCBECAU157.4°60.0°
HAR1CARCBENBG77.0°178.6°
HAR1CARCBEHBE41.0°60.7°
HAR2CARCBECAU47.9°60.0°
HAR2CARCBENBG173.5°58.7°
HAR2CARCBEHBE68.5°179.3°
CAUCBENBGHBE116.1°119.5°
CBECAUNBFHAU1125.2°119.9°
CBECAUNBFHAU2125.3°119.9°
CBECAUHAU1HAU2116.8°119.8°
CBECAUNBFCAS102.2°154.1°
CBECAUNBFCBD68.3°89.4°
CAUCBENBGCAT14.2°32.1°
CAUCBENBGSBH126.3°148.2°
NBGCBECAUNBF62.5°61.9°
NBGCBECAUHAU1172.2°178.2°
NBGCBECAUHAU262.7°58.2°
CBENBGCATCBB65.6°88.2°
CBENBGCATSBH139.5°179.7°
CBENBGCATHAT1169.1°151.7°
CBENBGCATHAT259.7°31.9°
CBENBGSBHOAB48.8°22.3°
CBENBGSBHOAC165.9°157.1°
CBENBGSBHCBC71.3°90.3°
HBECBECAUNBF55.1°57.5°
HBECBECAUHAU170.1°62.5°
HBECBECAUHAU2179.6°177.6°
HBECBENBGCAT130.4°151.6°
HBECBENBGSBH10.2°28.7°
NBFCAUHAU1HAU2116.8°120.2°
CAUNBFCASCBD170.7°119.9°
CAUNBFCASCBA88.1°56.6°
CAUNBFCASHAS1146.6°176.7°
CAUNBFCASHAS237.2°63.4°
CAUNBFCBDCAN160.6°150.9°
CAUNBFCBDCBB4.7°32.9°
HAU1CAUNBFCAS23.1°34.2°
HAU1CAUNBFCBD166.5°150.7°
HAU2CAUNBFCAS132.6°85.9°
HAU2CAUNBFCBD57.0°30.5°
NBFCASCBAHAS1125.3°120.0°
NBFCASCBAHAS2125.3°120.0°
NBFCASHAS1HAS2117.3°119.9°
NBFCASCBACAP12.1°180.0°
NBFCASCBANAW169.4°0.3°
CASNBFCBDCAN29.4°34.4°
CASNBFCBDCBB165.3°149.4°
CBDNBFCASCBA101.2°176.5°
CBDNBFCASHAS124.1°63.4°
CBDNBFCASHAS2133.5°56.5°
NBFCBDCANCBB166.2°176.6°
NBFCBDCANCAM165.0°174.2°
NBFCBDCANHAN15.1°5.7°
NBFCBDCBBCAQ163.4°172.8°
NBFCBDCBBCAT18.2°7.5°
CBACASHAS1HAS2117.3°120.0°
CASCBACAPNAW178.8°179.7°
CASCBACAPNAV178.4°180.0°
CASCBACAPHAP1.6°0.1°
CASCBANAWCAO178.5°179.9°
HAS1CASCBACAP113.2°60.0°
HAS1CASCBANAW65.4°120.3°
HAS2CASCBACAP137.3°60.0°
HAS2CASCBANAW44.1°119.7°
CBACAPNAVHAP180.0°179.9°
CBACAPNAVCAO0.2°0.1°
CBACAPNAVHAV179.8°180.0°
CAPCBANAWCAO0.3°0.4°
NAWCBACAPNAV0.3°0.3°
NAWCBACAPHAP179.6°179.8°
CBANAWCAONAV0.2°0.3°
CBANAWCAOHAO179.8°179.8°
CAPNAVCAOHAV180.0°179.9°
CAPNAVCAONAW0.0°0.2°
CAPNAVCAOHAO179.9°180.0°
HAPCAPNAVCAO179.7°180.0°
HAPCAPNAVHAV0.3°0.1°
NAVCAONAWHAO180.0°179.8°
HAVNAVCAONAW180.0°179.8°
HAVNAVCAOHAO0.0°0.1°
CBDCANCAMHAN180.0°180.0°
CBDCANCAMCAY0.1°0.2°
CBDCANCAMHAM179.9°179.8°
CANCBDCBBCAQ1.3°3.2°
CANCBDCBBCAT177.1°176.4°
CBBCBDCANCAM1.2°2.4°
CBBCBDCANHAN178.7°177.7°
CBDCBBCAQCAY0.3°1.9°
CBDCBBCAQCAT178.6°179.7°
CBDCBBCAQHAQ179.8°178.0°
CBDCBBCATNBG32.4°48.1°
CBDCBBCATHAT1157.7°168.2°
CBDCBBCATHAT292.8°72.0°
CANCAMCAYHAM180.0°180.0°
CANCAMCAYCAD176.2°178.9°
CANCAMCAYCAQ1.0°1.2°
HANCANCAMCAY179.9°179.8°
HANCANCAMHAM0.1°0.1°
CAMCAYCADCAQ177.2°180.0°
CAMCAYCADNAA90.6°157.2°
CAMCAYCAQCBB0.9°0.3°
CAMCAYCAQHAQ179.1°179.7°
HAMCAMCAYCAD3.8°1.2°
HAMCAMCAYCAQ179.0°178.8°
CADCAYCAQCBB176.3°179.7°
CADCAYCAQHAQ3.7°0.3°
CAQCAYCADNAA86.7°22.8°
CAYCAQCBBHAQ180.0°180.0°
CAYCAQCBBCAT178.4°177.7°
CAQCBBCATNBG146.1°132.2°
CAQCBBCATHAT120.8°12.2°
CAQCBBCATHAT288.6°107.7°
HAQCAQCBBCAT1.6°2.3°
CBBCATNBGHAT1125.3°120.1°
CBBCATNBGHAT2125.3°120.1°
CBBCATHAT1HAT2115.9°119.9°
CBBCATNBGSBH73.9°92.1°
NBGCATHAT1HAT2115.8°119.9°
CATNBGSBHOAB169.5°157.3°
CATNBGSBHOAC52.3°22.6°
CATNBGSBHCBC70.4°90.0°
HAT1CATNBGSBH51.4°28.0°
HAT2CATNBGSBH160.8°147.8°
NBGSBHOABOAC117.8°123.1°
NBGSBHOABCBC123.3°113.8°
NBGSBHOACCBC124.6°113.8°
NBGSBHCBCCAL83.7°89.7°
NBGSBHCBCSAX103.3°90.0°
OABSBHOACCBC117.5°123.1°
OABSBHCBCCAL37.0°23.0°
OABSBHCBCSAX136.1°157.4°
OACSBHCBCCAL154.3°157.7°
OACSBHCBCSAX18.7°22.7°
SBHCBCCALSAX174.1°179.7°
SBHCBCCALCAH174.0°179.8°
SBHCBCCALHAL6.0°0.4°
SBHCBCSAXCAI173.9°180.0°
CBCCALCAHHAL180.0°179.4°
CBCCALCAHCAI0.1°0.6°
CBCCALCAHHAH179.8°179.7°
CALCBCSAXCAI0.2°0.3°
SAXCBCCALCAH0.1°0.5°
SAXCBCCALHAL179.9°179.9°
CBCSAXCAICAH0.3°0.0°
CBCSAXCAIHAI179.7°180.0°
CALCAHCAIHAH180.0°179.7°
CALCAHCAISAX0.3°0.3°
CALCAHCAIHAI179.7°179.7°
HALCALCAHCAI179.9°180.0°
HALCALCAHHAH0.1°0.3°
CAHCAISAXHAI180.0°180.0°
HAHCAHCAISAX179.7°180.0°
HAHCAHCAIHAI0.3°0.0°

246704

PDB entries from 2025-12-24

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