BMP
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| P | OP1 | doub | 1.48Å | 1.54Å | |
| P | OP2 | sing | 1.61Å | 1.53Å | |
| P | OP3 | sing | 1.61Å | 1.53Å | |
| P | O5' | sing | 1.61Å | 1.59Å | |
| OP2 | HOP2 | sing | 0.97Å | 0.95Å | |
| OP3 | HOP3 | sing | 0.97Å | 0.95Å | |
| O5' | C5' | sing | 1.43Å | 1.40Å | |
| C5' | C4' | sing | 1.53Å | 1.53Å | |
| C5' | H5' | sing | 1.09Å | 1.12Å | |
| C5' | H5'' | sing | 1.09Å | 1.11Å | |
| C4' | O4' | sing | 1.45Å | 1.42Å | |
| C4' | C3' | sing | 1.54Å | 1.52Å | |
| C4' | H4' | sing | 1.09Å | 1.11Å | |
| O4' | C1' | sing | 1.44Å | 1.42Å | |
| C3' | O3' | sing | 1.43Å | 1.41Å | |
| C3' | C2' | sing | 1.54Å | 1.49Å | |
| C3' | H3' | sing | 1.09Å | 1.12Å | |
| O3' | HO3' | sing | 0.97Å | 0.95Å | |
| C2' | O2' | sing | 1.43Å | 1.42Å | |
| C2' | C1' | sing | 1.54Å | 1.56Å | |
| C2' | H2' | sing | 1.09Å | 1.11Å | |
| O2' | HO2' | sing | 0.97Å | 0.95Å | |
| C1' | N1 | sing | 1.46Å | 1.51Å | |
| C1' | H1' | sing | 1.09Å | 1.11Å | |
| N1 | C2 | sing | 1.35Å | 1.46Å | |
| N1 | C6 | sing | 1.37Å | 1.52Å | |
| C2 | O2 | doub | 1.22Å | 1.22Å | |
| C2 | N3 | sing | 1.35Å | 1.40Å | |
| N3 | C4 | sing | 1.35Å | 1.40Å | |
| N3 | HN3 | sing | 0.97Å | 1.02Å | |
| C4 | O4 | doub | 1.22Å | 1.21Å | |
| C4 | C5 | sing | 1.41Å | 1.58Å | |
| C5 | C6 | doub | 1.36Å | 1.37Å | |
| C5 | H51 | sing | 1.08Å | 1.10Å | |
| C6 | O1 | sing | 1.35Å | 1.33Å | |
| O1 | HO1 | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| OP1 | P | OP2 | 109.7° | 109.5° |
| OP1 | P | OP3 | 112.6° | 109.5° |
| OP1 | P | O5' | 101.3° | 109.4° |
| OP2 | P | OP3 | 112.8° | 109.5° |
| OP2 | P | O5' | 107.9° | 109.5° |
| P | OP2 | HOP2 | 109.7° | 106.8° |
| OP3 | P | O5' | 111.8° | 109.5° |
| P | OP3 | HOP3 | 112.6° | 106.9° |
| P | O5' | C5' | 122.9° | 106.8° |
| O5' | C5' | C4' | 112.3° | 109.5° |
| O5' | C5' | H5' | 111.1° | 109.5° |
| O5' | C5' | H5'' | 111.2° | 109.5° |
| C4' | C5' | H5' | 111.2° | 109.4° |
| C4' | C5' | H5'' | 111.2° | 109.4° |
| C5' | C4' | O4' | 115.5° | 110.4° |
| C5' | C4' | C3' | 120.6° | 110.8° |
| C5' | C4' | H4' | 96.5° | 110.3° |
| H5' | C5' | H5'' | 99.2° | 109.4° |
| O4' | C4' | C3' | 114.7° | 104.7° |
| O4' | C4' | H4' | 106.5° | 110.3° |
| C4' | O4' | C1' | 105.6° | 105.4° |
| C3' | C4' | H4' | 97.9° | 110.3° |
| C4' | C3' | O3' | 108.6° | 110.5° |
| C4' | C3' | C2' | 100.9° | 104.2° |
| C4' | C3' | H3' | 116.1° | 110.5° |
| O4' | C1' | C2' | 107.7° | 104.9° |
| O4' | C1' | N1 | 110.6° | 110.5° |
| O4' | C1' | H1' | 114.1° | 110.4° |
| O3' | C3' | C2' | 111.6° | 110.5° |
| O3' | C3' | H3' | 106.3° | 110.4° |
| C3' | O3' | HO3' | 108.6° | 106.8° |
| C2' | C3' | H3' | 113.3° | 110.5° |
| C3' | C2' | O2' | 118.6° | 110.5° |
| C3' | C2' | C1' | 106.6° | 104.0° |
| C3' | C2' | H2' | 109.6° | 110.5° |
| O2' | C2' | C1' | 119.1° | 110.7° |
| O2' | C2' | H2' | 92.8° | 110.5° |
| C2' | O2' | HO2' | 118.6° | 106.8° |
| C1' | C2' | H2' | 108.9° | 110.5° |
| C2' | C1' | N1 | 119.4° | 110.4° |
| C2' | C1' | H1' | 104.1° | 110.3° |
| N1 | C1' | H1' | 100.8° | 110.3° |
| C1' | N1 | C2 | 124.1° | 119.8° |
| C1' | N1 | C6 | 117.6° | 119.8° |
| C2 | N1 | C6 | 118.3° | 120.4° |
| N1 | C2 | O2 | 124.2° | 119.5° |
| N1 | C2 | N3 | 122.1° | 121.0° |
| N1 | C6 | C5 | 120.7° | 119.5° |
| N1 | C6 | O1 | 124.4° | 120.3° |
| O2 | C2 | N3 | 113.7° | 119.5° |
| C2 | N3 | C4 | 120.5° | 120.5° |
| C2 | N3 | HN3 | 119.9° | 119.7° |
| C4 | N3 | HN3 | 119.6° | 119.8° |
| N3 | C4 | O4 | 117.5° | 120.3° |
| N3 | C4 | C5 | 120.2° | 119.5° |
| O4 | C4 | C5 | 122.2° | 120.2° |
| C4 | C5 | C6 | 118.1° | 119.1° |
| C4 | C5 | H51 | 127.9° | 120.5° |
| C6 | C5 | H51 | 113.9° | 120.4° |
| C5 | C6 | O1 | 114.9° | 120.2° |
| C6 | O1 | HO1 | 124.4° | 106.8° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| OP1 | P | OP2 | OP3 | 126.4° | 120.0° |
| OP1 | P | OP2 | O5' | 109.6° | 119.9° |
| OP1 | P | OP3 | O5' | 113.2° | 120.0° |
| OP1 | P | OP2 | HOP2 | 180.0° | 60.0° |
| OP1 | P | OP3 | HOP3 | 180.0° | 180.0° |
| OP1 | P | O5' | C5' | 174.8° | 60.0° |
| OP2 | P | OP3 | O5' | 121.9° | 120.0° |
| OP2 | P | OP3 | HOP3 | 55.1° | 60.0° |
| OP2 | P | O5' | C5' | 69.9° | 180.0° |
| OP3 | P | OP2 | HOP2 | 53.6° | 60.0° |
| OP3 | P | O5' | C5' | 54.7° | 60.0° |
| O5' | P | OP2 | HOP2 | 70.5° | 180.0° |
| O5' | P | OP3 | HOP3 | 66.8° | 60.0° |
| P | O5' | C5' | C4' | 158.5° | 180.0° |
| P | O5' | C5' | H5' | 33.3° | 60.0° |
| P | O5' | C5' | H5'' | 76.2° | 60.0° |
| O5' | C5' | C4' | H5' | 125.2° | 120.0° |
| O5' | C5' | C4' | H5'' | 125.3° | 120.1° |
| O5' | C5' | H5' | H5'' | 117.1° | 120.0° |
| O5' | C5' | C4' | O4' | 79.7° | 61.4° |
| O5' | C5' | C4' | C3' | 65.3° | 176.9° |
| O5' | C5' | C4' | H4' | 168.5° | 60.7° |
| C4' | C5' | H5' | H5'' | 117.1° | 119.9° |
| C5' | C4' | O4' | C3' | 147.1° | 119.2° |
| C5' | C4' | O4' | H4' | 105.8° | 122.2° |
| C5' | C4' | C3' | H4' | 102.4° | 122.4° |
| C5' | C4' | O4' | C1' | 155.3° | 159.5° |
| C5' | C4' | C3' | O3' | 102.7° | 98.5° |
| C5' | C4' | C3' | C2' | 139.8° | 142.7° |
| C5' | C4' | C3' | H3' | 16.9° | 24.0° |
| H5' | C5' | C4' | O4' | 155.1° | 178.5° |
| H5' | C5' | C4' | C3' | 59.9° | 63.1° |
| H5' | C5' | C4' | H4' | 43.3° | 59.3° |
| H5'' | C5' | C4' | O4' | 45.6° | 58.6° |
| H5'' | C5' | C4' | C3' | 169.4° | 56.8° |
| H5'' | C5' | C4' | H4' | 66.2° | 179.2° |
| O4' | C4' | C3' | H4' | 112.3° | 118.6° |
| O4' | C4' | C3' | O3' | 112.0° | 142.5° |
| O4' | C4' | C3' | C2' | 5.5° | 23.8° |
| O4' | C4' | C3' | H3' | 128.4° | 95.0° |
| C4' | O4' | C1' | C2' | 18.1° | 40.4° |
| C4' | O4' | C1' | N1 | 150.2° | 159.3° |
| C4' | O4' | C1' | H1' | 97.0° | 78.5° |
| C3' | C4' | O4' | C1' | 8.3° | 40.3° |
| C4' | C3' | O3' | C2' | 110.4° | 114.9° |
| C4' | C3' | O3' | H3' | 125.6° | 122.5° |
| C4' | C3' | C2' | H3' | 124.9° | 118.7° |
| C4' | C3' | O3' | HO3' | 180.0° | 178.1° |
| C4' | C3' | C2' | O2' | 153.5° | 118.9° |
| C4' | C3' | C2' | C1' | 15.7° | 0.0° |
| C4' | C3' | C2' | H2' | 101.9° | 118.5° |
| H4' | C4' | O4' | C1' | 98.8° | 78.4° |
| H4' | C4' | C3' | O3' | 0.3° | 23.9° |
| H4' | C4' | C3' | C2' | 117.7° | 94.9° |
| H4' | C4' | C3' | H3' | 119.3° | 146.4° |
| O4' | C1' | C2' | C3' | 22.2° | 23.9° |
| O4' | C1' | C2' | O2' | 159.6° | 142.6° |
| O4' | C1' | C2' | N1 | 127.2° | 119.0° |
| O4' | C1' | C2' | H1' | 121.5° | 118.9° |
| O4' | C1' | C2' | H2' | 95.9° | 94.6° |
| O4' | C1' | N1 | H1' | 121.1° | 122.3° |
| O4' | C1' | N1 | C2 | 60.6° | 55.4° |
| O4' | C1' | N1 | C6 | 120.0° | 124.8° |
| O3' | C3' | C2' | H3' | 119.9° | 122.5° |
| O3' | C3' | C2' | O2' | 38.3° | 0.1° |
| O3' | C3' | C2' | C1' | 99.5° | 118.7° |
| O3' | C3' | C2' | H2' | 142.9° | 122.7° |
| C2' | C3' | O3' | HO3' | 69.6° | 63.3° |
| C3' | C2' | O2' | C1' | 132.4° | 114.7° |
| C3' | C2' | O2' | H2' | 114.1° | 122.6° |
| C3' | C2' | C1' | H2' | 118.1° | 118.6° |
| C3' | C2' | O2' | HO2' | 180.0° | 61.5° |
| C3' | C2' | C1' | N1 | 149.4° | 142.9° |
| C3' | C2' | C1' | H1' | 99.3° | 94.9° |
| H3' | C3' | O3' | HO3' | 54.4° | 59.3° |
| H3' | C3' | C2' | O2' | 81.7° | 122.4° |
| H3' | C3' | C2' | C1' | 140.6° | 118.7° |
| H3' | C3' | C2' | H2' | 23.0° | 0.2° |
| O2' | C2' | C1' | H2' | 104.5° | 122.7° |
| O2' | C2' | C1' | N1 | 73.2° | 98.4° |
| O2' | C2' | C1' | H1' | 38.1° | 23.8° |
| C1' | C2' | O2' | HO2' | 47.6° | 176.2° |
| C2' | C1' | N1 | H1' | 113.1° | 122.2° |
| C2' | C1' | N1 | C2 | 65.2° | 60.1° |
| C2' | C1' | N1 | C6 | 114.2° | 119.7° |
| H2' | C2' | O2' | HO2' | 65.9° | 61.1° |
| H2' | C2' | C1' | N1 | 31.3° | 24.4° |
| H2' | C2' | C1' | H1' | 142.6° | 146.5° |
| C1' | N1 | C2 | C6 | 179.4° | 179.7° |
| C1' | N1 | C2 | O2 | 1.3° | 0.0° |
| C1' | N1 | C2 | N3 | 178.0° | 180.0° |
| C1' | N1 | C6 | C5 | 177.7° | 179.7° |
| C1' | N1 | C6 | O1 | 0.4° | 0.3° |
| H1' | C1' | N1 | C2 | 178.3° | 177.7° |
| H1' | C1' | N1 | C6 | 1.2° | 2.5° |
| N1 | C2 | O2 | N3 | 179.4° | 179.9° |
| N1 | C2 | N3 | C4 | 0.8° | 0.1° |
| N1 | C2 | N3 | HN3 | 179.3° | 180.0° |
| C2 | N1 | C6 | C5 | 1.7° | 0.6° |
| C2 | N1 | C6 | O1 | 179.8° | 179.9° |
| C6 | N1 | C2 | O2 | 179.2° | 179.7° |
| C6 | N1 | C2 | N3 | 1.4° | 0.2° |
| N1 | C6 | C5 | C4 | 0.0° | 0.6° |
| N1 | C6 | C5 | O1 | 178.3° | 179.3° |
| N1 | C6 | C5 | H51 | 179.9° | 179.7° |
| N1 | C6 | O1 | HO1 | 179.9° | 179.4° |
| O2 | C2 | N3 | C4 | 178.7° | 180.0° |
| O2 | C2 | N3 | HN3 | 1.3° | 0.1° |
| C2 | N3 | C4 | HN3 | 180.0° | 179.9° |
| C2 | N3 | C4 | O4 | 178.4° | 180.0° |
| C2 | N3 | C4 | C5 | 2.5° | 0.0° |
| N3 | C4 | O4 | C5 | 175.8° | 180.0° |
| N3 | C4 | C5 | C6 | 2.1° | 0.3° |
| N3 | C4 | C5 | H51 | 177.9° | 180.0° |
| HN3 | N3 | C4 | O4 | 1.7° | 0.1° |
| HN3 | N3 | C4 | C5 | 177.5° | 179.9° |
| O4 | C4 | C5 | C6 | 177.8° | 179.7° |
| O4 | C4 | C5 | H51 | 2.2° | 0.0° |
| C4 | C5 | C6 | H51 | 180.0° | 179.7° |
| C4 | C5 | C6 | O1 | 178.3° | 180.0° |
| C5 | C6 | O1 | HO1 | 1.7° | 0.0° |
| H51 | C5 | C6 | O1 | 1.7° | 0.3° |
