BLO
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
O7 | C7 | doub | 1.21Å | 1.22Å | |
C7 | C8 | sing | 1.51Å | 1.52Å | |
C7 | N6 | sing | 1.35Å | 1.32Å | |
C8 | C9 | sing | 1.53Å | 1.52Å | |
C8 | H81 | sing | 1.09Å | 1.10Å | |
C8 | H82 | sing | 1.09Å | 1.10Å | |
C9 | C10 | sing | 1.53Å | 1.53Å | |
C9 | N9 | sing | 1.47Å | 1.45Å | |
C9 | H9 | sing | 1.09Å | 1.10Å | |
C10 | C11 | sing | 1.53Å | 1.53Å | |
C10 | H101 | sing | 1.09Å | 1.10Å | |
C10 | H102 | sing | 1.09Å | 1.10Å | |
C11 | N12 | sing | 1.47Å | 1.47Å | |
C11 | H111 | sing | 1.09Å | 1.10Å | |
C11 | H112 | sing | 1.09Å | 1.10Å | |
N12 | C14 | sing | 1.38Å | 1.42Å | |
N12 | C13 | sing | 1.47Å | 1.47Å | |
C14 | N15 | doub | 1.30Å | 1.33Å | |
C14 | N14 | sing | 1.38Å | 1.34Å | |
N15 | H15 | sing | 0.97Å | 1.00Å | |
N14 | H141 | sing | 0.97Å | 1.00Å | |
N14 | H142 | sing | 0.97Å | 1.00Å | |
C13 | H131 | sing | 1.09Å | 1.10Å | |
C13 | H132 | sing | 1.09Å | 1.10Å | |
C13 | H133 | sing | 1.09Å | 1.10Å | |
N9 | HN91 | sing | 1.01Å | 1.00Å | |
N9 | HN92 | sing | 1.01Å | 1.00Å | |
N6 | C4' | sing | 1.46Å | 1.46Å | |
N6 | HN6 | sing | 0.97Å | 1.00Å | |
C4' | C3' | sing | 1.51Å | 1.53Å | |
C4' | C5' | sing | 1.53Å | 1.54Å | |
C4' | H4' | sing | 1.09Å | 1.10Å | |
C3' | C2' | doub | 1.30Å | 1.28Å | |
C3' | H3' | sing | 1.08Å | 1.08Å | |
C2' | C1' | sing | 1.50Å | 1.29Å | |
C2' | H2' | sing | 1.08Å | 1.08Å | |
C5' | C6' | sing | 1.51Å | 1.50Å | |
C5' | O5' | sing | 1.43Å | 1.43Å | |
C5' | H5' | sing | 1.09Å | 1.10Å | |
C6' | O3 | sing | 1.34Å | 1.25Å | |
C6' | O4 | doub | 1.21Å | 1.25Å | |
O3 | HO3 | sing | 0.97Å | 0.95Å | |
O5' | C1' | sing | 1.43Å | 1.41Å | |
C1' | N1 | sing | 1.46Å | 1.35Å | |
C1' | H1' | sing | 1.09Å | 1.10Å | |
N1 | C6 | sing | 1.36Å | 1.34Å | Aromatic |
N1 | C2 | sing | 1.35Å | 1.35Å | Aromatic |
C6 | C5 | doub | 1.36Å | 1.38Å | Aromatic |
C6 | H6 | sing | 1.08Å | 1.08Å | |
C5 | C4 | sing | 1.41Å | 1.38Å | Aromatic |
C5 | H5 | sing | 1.08Å | 1.08Å | |
C4 | O1 | sing | 1.35Å | 1.33Å | |
C4 | N3 | doub | 1.32Å | 1.35Å | Aromatic |
O1 | HO1 | sing | 0.97Å | 0.95Å | |
N3 | C2 | sing | 1.33Å | 1.36Å | Aromatic |
C2 | O2 | doub | 1.22Å | 1.25Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O7 | C7 | C8 | 123.5° | 120.0° |
O7 | C7 | N6 | 123.1° | 120.0° |
C8 | C7 | N6 | 113.4° | 120.0° |
C7 | C8 | C9 | 113.7° | 109.5° |
C7 | C8 | H81 | 107.1° | 109.5° |
C7 | C8 | H82 | 108.1° | 109.5° |
C7 | N6 | C4' | 124.2° | 120.0° |
C7 | N6 | HN6 | 117.9° | 120.0° |
C9 | C8 | H81 | 107.1° | 109.4° |
C9 | C8 | H82 | 108.1° | 109.5° |
C8 | C9 | C10 | 107.7° | 109.5° |
C8 | C9 | N9 | 107.9° | 109.5° |
C8 | C9 | H9 | 111.6° | 109.5° |
H81 | C8 | H82 | 112.8° | 109.5° |
C10 | C9 | N9 | 109.3° | 109.5° |
C10 | C9 | H9 | 110.2° | 109.5° |
C9 | C10 | C11 | 111.8° | 109.4° |
C9 | C10 | H101 | 108.1° | 109.5° |
C9 | C10 | H102 | 108.7° | 109.5° |
N9 | C9 | H9 | 110.0° | 109.4° |
C9 | N9 | HN91 | 109.4° | 106.7° |
C9 | N9 | HN92 | 109.5° | 106.7° |
C11 | C10 | H101 | 108.2° | 109.5° |
C11 | C10 | H102 | 108.7° | 109.5° |
C10 | C11 | N12 | 110.4° | 109.4° |
C10 | C11 | H111 | 109.0° | 109.5° |
C10 | C11 | H112 | 109.2° | 109.5° |
H101 | C10 | H102 | 111.3° | 109.5° |
N12 | C11 | H111 | 109.0° | 109.5° |
N12 | C11 | H112 | 109.2° | 109.5° |
C11 | N12 | C14 | 121.9° | 120.0° |
C11 | N12 | C13 | 118.4° | 120.0° |
H111 | C11 | H112 | 110.2° | 109.5° |
C14 | N12 | C13 | 119.7° | 120.0° |
N12 | C14 | N15 | 121.4° | 120.0° |
N12 | C14 | N14 | 120.0° | 120.0° |
N12 | C13 | H131 | 109.5° | 109.5° |
N12 | C13 | H132 | 109.4° | 109.5° |
N12 | C13 | H133 | 109.5° | 109.4° |
N15 | C14 | N14 | 118.6° | 120.0° |
C14 | N15 | H15 | 109.6° | 119.9° |
C14 | N14 | H141 | 125.2° | 120.0° |
C14 | N14 | H142 | 109.6° | 120.0° |
H141 | N14 | H142 | 125.2° | 120.0° |
H131 | C13 | H132 | 109.5° | 109.5° |
H131 | C13 | H133 | 109.4° | 109.4° |
H132 | C13 | H133 | 109.5° | 109.5° |
HN91 | N9 | HN92 | 109.5° | 106.6° |
C4' | N6 | HN6 | 117.9° | 120.0° |
N6 | C4' | C3' | 113.8° | 109.6° |
N6 | C4' | C5' | 106.0° | 109.6° |
N6 | C4' | H4' | 107.8° | 109.5° |
C3' | C4' | C5' | 105.5° | 109.1° |
C3' | C4' | H4' | 108.3° | 109.5° |
C4' | C3' | C2' | 122.0° | 121.1° |
C4' | C3' | H3' | 119.0° | 119.5° |
C5' | C4' | H4' | 115.7° | 109.5° |
C4' | C5' | C6' | 114.1° | 109.8° |
C4' | C5' | O5' | 109.9° | 108.7° |
C4' | C5' | H5' | 104.6° | 109.5° |
C2' | C3' | H3' | 119.0° | 119.5° |
C3' | C2' | C1' | 119.3° | 122.3° |
C3' | C2' | H2' | 120.3° | 118.8° |
C1' | C2' | H2' | 120.4° | 118.8° |
C2' | C1' | O5' | 120.2° | 110.8° |
C2' | C1' | N1 | 122.6° | 109.3° |
C2' | C1' | H1' | 81.5° | 109.2° |
C6' | C5' | O5' | 104.8° | 109.6° |
C6' | C5' | H5' | 109.7° | 109.6° |
C5' | C6' | O3 | 116.8° | 120.0° |
C5' | C6' | O4 | 119.9° | 120.0° |
O5' | C5' | H5' | 114.0° | 109.6° |
C5' | O5' | C1' | 113.9° | 107.1° |
O3 | C6' | O4 | 123.3° | 120.0° |
C6' | O3 | HO3 | 109.5° | 120.0° |
O5' | C1' | N1 | 114.7° | 109.2° |
O5' | C1' | H1' | 106.2° | 109.2° |
N1 | C1' | H1' | 98.7° | 109.2° |
C1' | N1 | C6 | 107.1° | 119.9° |
C1' | N1 | C2 | 130.4° | 119.9° |
C6 | N1 | C2 | 122.5° | 120.3° |
N1 | C6 | C5 | 120.6° | 119.3° |
N1 | C6 | H6 | 119.7° | 120.3° |
N1 | C2 | N3 | 118.1° | 121.1° |
N1 | C2 | O2 | 124.4° | 119.4° |
C5 | C6 | H6 | 119.7° | 120.4° |
C6 | C5 | C4 | 116.2° | 119.0° |
C6 | C5 | H5 | 121.9° | 120.5° |
C4 | C5 | H5 | 121.9° | 120.5° |
C5 | C4 | O1 | 118.6° | 120.1° |
C5 | C4 | N3 | 122.4° | 119.7° |
O1 | C4 | N3 | 119.0° | 120.2° |
C4 | O1 | HO1 | 109.5° | 106.7° |
C4 | N3 | C2 | 120.0° | 120.7° |
N3 | C2 | O2 | 117.5° | 119.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O7 | C7 | C8 | N6 | 179.7° | 179.9° |
O7 | C7 | C8 | C9 | 39.9° | 0.1° |
O7 | C7 | C8 | H81 | 158.1° | 120.0° |
O7 | C7 | C8 | H82 | 80.1° | 120.0° |
O7 | C7 | N6 | C4' | 0.9° | 0.1° |
O7 | C7 | N6 | HN6 | 179.2° | 180.0° |
C7 | C8 | C9 | H81 | 118.1° | 120.0° |
C7 | C8 | C9 | H82 | 120.0° | 120.0° |
C7 | C8 | H81 | H82 | 118.8° | 120.0° |
C7 | C8 | C9 | C10 | 171.5° | 175.0° |
C7 | C8 | C9 | N9 | 70.6° | 65.0° |
C7 | C8 | C9 | H9 | 50.4° | 55.0° |
C8 | C7 | N6 | C4' | 178.9° | 180.0° |
C8 | C7 | N6 | HN6 | 1.1° | 0.1° |
N6 | C7 | C8 | C9 | 140.3° | 180.0° |
N6 | C7 | C8 | H81 | 22.2° | 60.1° |
N6 | C7 | C8 | H82 | 99.7° | 60.0° |
C7 | N6 | C4' | HN6 | 180.0° | 179.9° |
C7 | N6 | C4' | C3' | 124.0° | 85.2° |
C7 | N6 | C4' | C5' | 120.6° | 155.2° |
C7 | N6 | C4' | H4' | 3.9° | 35.0° |
C9 | C8 | H81 | H82 | 118.8° | 120.0° |
C8 | C9 | C10 | N9 | 117.0° | 120.0° |
C8 | C9 | C10 | H9 | 122.0° | 120.0° |
C8 | C9 | N9 | H9 | 122.0° | 120.0° |
C8 | C9 | C10 | C11 | 113.7° | 175.0° |
C8 | C9 | C10 | H101 | 5.3° | 55.0° |
C8 | C9 | C10 | H102 | 126.3° | 65.0° |
C8 | C9 | N9 | HN91 | 4.6° | 60.0° |
C8 | C9 | N9 | HN92 | 124.6° | 173.8° |
H81 | C8 | C9 | C10 | 53.4° | 55.0° |
H81 | C8 | C9 | N9 | 171.3° | 175.0° |
H81 | C8 | C9 | H9 | 67.7° | 65.0° |
H82 | C8 | C9 | C10 | 68.5° | 65.0° |
H82 | C8 | C9 | N9 | 49.4° | 55.0° |
H82 | C8 | C9 | H9 | 170.5° | 175.0° |
C10 | C9 | N9 | H9 | 121.2° | 120.0° |
C9 | C10 | C11 | H101 | 119.0° | 120.0° |
C9 | C10 | C11 | H102 | 120.0° | 120.0° |
C9 | C10 | H101 | H102 | 119.3° | 120.0° |
C9 | C10 | C11 | N12 | 162.7° | 180.0° |
C9 | C10 | C11 | H111 | 77.7° | 60.0° |
C9 | C10 | C11 | H112 | 42.7° | 60.0° |
C10 | C9 | N9 | HN91 | 121.5° | 60.0° |
C10 | C9 | N9 | HN92 | 118.5° | 53.8° |
N9 | C9 | C10 | C11 | 129.3° | 65.0° |
N9 | C9 | C10 | H101 | 111.7° | 175.0° |
N9 | C9 | C10 | H102 | 9.3° | 55.0° |
C9 | N9 | HN91 | HN92 | 120.0° | 113.8° |
H9 | C9 | C10 | C11 | 8.2° | 55.0° |
H9 | C9 | C10 | H101 | 127.2° | 65.0° |
H9 | C9 | C10 | H102 | 111.8° | 175.0° |
H9 | C9 | N9 | HN91 | 117.4° | 180.0° |
H9 | C9 | N9 | HN92 | 2.6° | 66.2° |
C11 | C10 | H101 | H102 | 119.4° | 120.0° |
C10 | C11 | N12 | H111 | 119.6° | 119.9° |
C10 | C11 | N12 | H112 | 120.0° | 120.0° |
C10 | C11 | H111 | H112 | 119.8° | 120.0° |
C10 | C11 | N12 | C14 | 76.7° | 90.0° |
C10 | C11 | N12 | C13 | 100.8° | 90.1° |
H101 | C10 | C11 | N12 | 43.7° | 60.0° |
H101 | C10 | C11 | H111 | 163.3° | 180.0° |
H101 | C10 | C11 | H112 | 76.3° | 60.0° |
H102 | C10 | C11 | N12 | 77.3° | 60.0° |
H102 | C10 | C11 | H111 | 42.3° | 60.0° |
H102 | C10 | C11 | H112 | 162.7° | NaN° |
N12 | C11 | H111 | H112 | 119.7° | 120.1° |
C11 | N12 | C14 | C13 | 177.5° | 179.9° |
C11 | N12 | C14 | N15 | 4.2° | 180.0° |
C11 | N12 | C14 | N14 | 175.3° | 0.1° |
C11 | N12 | C13 | H131 | 126.5° | 0.1° |
C11 | N12 | C13 | H132 | 6.5° | 120.0° |
C11 | N12 | C13 | H133 | 113.6° | 120.0° |
H111 | C11 | N12 | C14 | 42.9° | 29.9° |
H111 | C11 | N12 | C13 | 139.5° | 150.0° |
H112 | C11 | N12 | C14 | 163.3° | 150.0° |
H112 | C11 | N12 | C13 | 19.1° | 29.9° |
N12 | C14 | N15 | N14 | 179.5° | 179.9° |
N12 | C14 | N15 | H15 | 180.0° | 180.0° |
N12 | C14 | N14 | H141 | 179.7° | 180.0° |
N12 | C14 | N14 | H142 | 0.2° | 0.0° |
C14 | N12 | C13 | H131 | 55.9° | 180.0° |
C14 | N12 | C13 | H132 | 175.9° | 59.9° |
C14 | N12 | C13 | H133 | 64.0° | 60.1° |
C13 | N12 | C14 | N15 | 178.3° | 0.1° |
C13 | N12 | C14 | N14 | 2.2° | 180.0° |
N12 | C13 | H131 | H132 | 120.0° | 120.1° |
N12 | C13 | H131 | H133 | 120.0° | 119.9° |
N12 | C13 | H132 | H133 | 120.0° | 120.0° |
N15 | C14 | N14 | H141 | 0.2° | 0.0° |
N15 | C14 | N14 | H142 | 179.7° | 180.0° |
N14 | C14 | N15 | H15 | 0.5° | 0.1° |
C14 | N14 | H141 | H142 | 180.0° | 180.0° |
H131 | C13 | H132 | H133 | 120.0° | 120.0° |
N6 | C4' | C3' | C5' | 115.8° | 120.0° |
N6 | C4' | C3' | H4' | 119.8° | 120.2° |
N6 | C4' | C5' | H4' | 119.4° | 120.2° |
N6 | C4' | C3' | C2' | 126.4° | 134.3° |
N6 | C4' | C3' | H3' | 53.6° | 45.7° |
N6 | C4' | C5' | C6' | 73.0° | 69.7° |
N6 | C4' | C5' | O5' | 169.6° | 170.3° |
N6 | C4' | C5' | H5' | 46.9° | 50.6° |
HN6 | N6 | C4' | C3' | 56.1° | 94.8° |
HN6 | N6 | C4' | C5' | 59.4° | 24.9° |
HN6 | N6 | C4' | H4' | 176.1° | 145.0° |
C3' | C4' | C5' | H4' | 119.6° | 119.8° |
C4' | C3' | C2' | H3' | 180.0° | 180.0° |
C4' | C3' | C2' | C1' | 29.3° | 0.0° |
C4' | C3' | C2' | H2' | 150.7° | 179.9° |
C3' | C4' | C5' | C6' | 166.0° | 170.3° |
C3' | C4' | C5' | O5' | 48.7° | 50.3° |
C3' | C4' | C5' | H5' | 74.1° | 69.3° |
C5' | C4' | C3' | C2' | 10.6° | 14.4° |
C5' | C4' | C3' | H3' | 169.4° | 165.6° |
C4' | C5' | C6' | O5' | 120.2° | 119.4° |
C4' | C5' | C6' | H5' | 117.0° | 120.3° |
C4' | C5' | O5' | H5' | 117.0° | 119.6° |
C4' | C5' | C6' | O3 | 100.6° | 65.7° |
C4' | C5' | C6' | O4 | 81.0° | 114.4° |
C4' | C5' | O5' | C1' | 52.5° | 73.5° |
H4' | C4' | C3' | C2' | 113.9° | 105.5° |
H4' | C4' | C3' | H3' | 66.2° | 74.5° |
H4' | C4' | C5' | C6' | 46.4° | 50.4° |
H4' | C4' | C5' | O5' | 71.0° | 69.5° |
H4' | C4' | C5' | H5' | 166.3° | 170.8° |
C3' | C2' | C1' | H2' | 180.0° | 179.9° |
C3' | C2' | C1' | O5' | 29.2° | 20.8° |
C3' | C2' | C1' | N1 | 132.0° | 141.2° |
C3' | C2' | C1' | H1' | 133.1° | 99.5° |
H3' | C3' | C2' | C1' | 150.8° | 180.0° |
H3' | C3' | C2' | H2' | 29.3° | 0.1° |
C2' | C1' | O5' | C5' | 13.7° | 56.7° |
C2' | C1' | O5' | N1 | 162.6° | 120.4° |
C2' | C1' | O5' | H1' | 89.5° | 120.3° |
C2' | C1' | N1 | H1' | 85.4° | 119.4° |
C2' | C1' | N1 | C6 | 82.4° | 115.0° |
C2' | C1' | N1 | C2 | 97.2° | 65.2° |
H2' | C2' | C1' | O5' | 150.8° | 159.1° |
H2' | C2' | C1' | N1 | 48.0° | 38.7° |
H2' | C2' | C1' | H1' | 46.9° | 80.6° |
C6' | C5' | O5' | H5' | 119.9° | 120.3° |
C5' | C6' | O3 | O4 | 178.4° | 179.9° |
C5' | C6' | O3 | HO3 | 178.3° | 180.0° |
C6' | C5' | O5' | C1' | 175.5° | 166.4° |
O5' | C5' | C6' | O3 | 139.2° | 174.9° |
O5' | C5' | C6' | O4 | 39.2° | 5.0° |
C5' | O5' | C1' | N1 | 176.3° | 177.0° |
C5' | O5' | C1' | H1' | 75.8° | 63.7° |
H5' | C5' | C6' | O3 | 16.4° | 54.6° |
H5' | C5' | C6' | O4 | 162.0° | 125.3° |
H5' | C5' | O5' | C1' | 64.6° | 46.1° |
O4 | C6' | O3 | HO3 | 0.0° | 0.1° |
O5' | C1' | N1 | H1' | 112.4° | 119.3° |
O5' | C1' | N1 | C6 | 79.7° | 123.7° |
O5' | C1' | N1 | C2 | 100.6° | 56.1° |
C1' | N1 | C6 | C2 | 179.7° | 179.8° |
C1' | N1 | C6 | C5 | 178.9° | 180.0° |
C1' | N1 | C6 | H6 | 1.1° | 0.0° |
C1' | N1 | C2 | N3 | 179.7° | 179.7° |
C1' | N1 | C2 | O2 | 0.2° | 0.2° |
H1' | C1' | N1 | C6 | 167.8° | 4.4° |
H1' | C1' | N1 | C2 | 11.8° | 175.4° |
N1 | C6 | C5 | H6 | 180.0° | 180.0° |
N1 | C6 | C5 | C4 | 1.1° | 0.0° |
N1 | C6 | C5 | H5 | 178.9° | 180.0° |
C6 | N1 | C2 | N3 | 0.1° | 0.5° |
C6 | N1 | C2 | O2 | 179.4° | 180.0° |
C2 | N1 | C6 | C5 | 0.8° | 0.2° |
C2 | N1 | C6 | H6 | 179.2° | 179.8° |
N1 | C2 | N3 | C4 | 3.0° | 0.5° |
N1 | C2 | N3 | O2 | 179.5° | 179.6° |
C6 | C5 | C4 | H5 | 180.0° | 179.9° |
C6 | C5 | C4 | O1 | 175.9° | 180.0° |
C6 | C5 | C4 | N3 | 4.0° | 0.0° |
H6 | C6 | C5 | C4 | 179.0° | 179.9° |
H6 | C6 | C5 | H5 | 1.0° | 0.0° |
C5 | C4 | O1 | N3 | 179.8° | 180.0° |
C5 | C4 | O1 | HO1 | 79.6° | 179.9° |
C5 | C4 | N3 | C2 | 5.0° | 0.2° |
H5 | C5 | C4 | O1 | 4.1° | 0.0° |
H5 | C5 | C4 | N3 | 176.0° | 180.0° |
O1 | C4 | N3 | C2 | 174.8° | 179.8° |
N3 | C4 | O1 | HO1 | 100.2° | 0.0° |
C4 | N3 | C2 | O2 | 176.6° | 180.0° |