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Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N6C6sing1.38Å1.33Å
N1C6doub1.33Å1.34ÅAromatic
N1C2sing1.32Å1.32ÅAromatic
C6C5sing1.41Å1.39ÅAromatic
C2N3doub1.32Å1.32ÅAromatic
C5N7sing1.35Å1.33ÅAromatic
C5C4doub1.41Å1.39ÅAromatic
N7C8doub1.30Å1.33ÅAromatic
N3C4sing1.33Å1.34ÅAromatic
C4N9sing1.37Å1.33ÅAromatic
C8N9sing1.36Å1.33ÅAromatic
N9C1'sing1.46Å1.48Å
C1'C2'sing1.55Å1.53Å
C1'O4'sing1.44Å1.44Å
C2'C3'sing1.55Å1.53Å
C2'O2'sing1.43Å1.43Å
O4'C4'sing1.44Å1.43Å
O1PPdoub1.48Å1.61Å
O2PPsing1.61Å1.48Å
O5'Psing1.61Å1.61Å
O5'C5'sing1.43Å1.43Å
C3'C4'sing1.54Å1.53Å
C3'O3'sing1.43Å1.43Å
PO3Psing1.61Å1.61Å
C4'C5'sing1.53Å1.53Å
OCdoub1.21Å1.23Å
O3PCsing1.34Å1.36Å
CCAsing1.51Å1.53Å
CANsing1.47Å1.47Å
CACBsing1.53Å1.53Å
CBCGsing1.53Å1.53Å
CGCDsing1.53Å1.53Å
CDCEsing1.53Å1.53Å
CENZsing1.47Å1.47Å
CT2CTsing1.53Å1.53Å
CT1CTsing1.53Å1.53Å
O2CZsing1.35Å1.36Å
O2CTsing1.45Å1.43Å
NZCZsing1.35Å1.33Å
CZO1doub1.22Å1.23Å
CTCT3sing1.53Å1.53Å
CT1H1sing1.09Å1.10Å
CT1H2sing1.09Å1.10Å
CT1H3sing1.09Å1.10Å
CT2H4sing1.09Å1.10Å
CT2H5sing1.09Å1.10Å
CT2H6sing1.09Å1.10Å
CT3H7sing1.09Å1.10Å
CT3H8sing1.09Å1.10Å
CT3H9sing1.09Å1.10Å
NZH10sing0.97Å1.00Å
CEH11sing1.09Å1.10Å
CEH12sing1.09Å1.10Å
CDH13sing1.09Å1.10Å
CDH14sing1.09Å1.10Å
CGH15sing1.09Å1.10Å
CGH16sing1.09Å1.10Å
CBH17sing1.09Å1.10Å
CBH18sing1.09Å1.10Å
CAH19sing1.09Å1.10Å
NH20sing1.01Å1.00Å
NH21sing1.01Å1.00Å
O2PH23sing0.97Å0.95Å
C5'H24sing1.09Å1.10Å
C5'H25sing1.09Å1.10Å
C4'H26sing1.09Å1.10Å
C3'H27sing1.09Å1.10Å
O3'H28sing0.97Å0.95Å
C2'H29sing1.09Å1.10Å
O2'H30sing0.97Å0.95Å
C1'H31sing1.09Å1.10Å
C8H32sing1.08Å1.08Å
C2H33sing1.08Å1.08Å
N6H34sing0.97Å1.00Å
N6H35sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
N6C6N1120.6°120.8°
N6C6C5120.2°120.8°
C6N6H34109.5°120.0°
C6N6H35109.5°120.0°
C6N1C2120.8°121.2°
N1C6C5119.0°118.5°
N1C2N3121.7°122.5°
N1C2H33119.2°118.7°
C6C5N7134.2°134.7°
C6C5C4118.6°118.1°
C2N3C4120.8°120.7°
N3C2H33119.2°118.8°
N7C5C4107.2°107.2°
C5N7C8108.3°109.4°
C5C4N3119.1°119.1°
C5C4N9107.1°106.0°
N7C8N9109.1°110.0°
N7C8H32125.5°125.1°
N3C4N9133.8°134.9°
C4N9C8108.4°107.4°
C4N9C1'126.1°126.2°
C8N9C1'125.5°126.3°
N9C8H32125.5°124.9°
N9C1'C2'111.1°110.6°
N9C1'O4'104.5°110.6°
N9C1'H31111.7°110.7°
C2'C1'O4'106.0°103.5°
C1'C2'C3'101.1°102.1°
C1'C2'O2'109.8°110.9°
C1'C2'H29111.4°110.9°
C2'C1'H31110.9°110.6°
C1'O4'C4'107.2°106.9°
O4'C1'H31112.3°110.5°
C3'C2'O2'109.6°110.9°
C2'C3'C4'97.2°104.2°
C2'C3'O3'109.5°110.5°
C2'C3'H27112.8°110.6°
C3'C2'H29111.4°110.9°
O2'C2'H29112.9°110.8°
C2'O2'H30109.5°114.1°
O4'C4'C3'103.0°107.4°
O4'C4'C5'111.2°109.9°
O4'C4'H26111.4°109.9°
O1PPO2P113.8°109.5°
O1PPO5'105.1°109.5°
O1PPO3P104.4°109.5°
O2PPO5'114.2°109.5°
O2PPO3P111.4°109.5°
PO2PH23109.5°114.0°
PO5'C5'120.6°123.0°
O5'PO3P107.1°109.5°
O5'C5'C4'109.5°109.5°
O5'C5'H24109.5°109.4°
O5'C5'H25109.5°109.5°
C4'C3'O3'108.9°110.5°
C3'C4'C5'111.3°109.9°
C3'C4'H26110.0°109.9°
C4'C3'H27112.8°110.5°
O3'C3'H27114.4°110.4°
C3'O3'H28109.5°114.0°
PO3PC107.4°117.0°
C4'C5'H24109.5°109.5°
C4'C5'H25109.5°109.5°
C5'C4'H26109.9°109.9°
OCO3P123.7°120.0°
OCCA121.0°120.0°
O3PCCA115.2°120.0°
CCAN108.2°109.5°
CCACB109.9°109.5°
CCAH19109.6°109.4°
NCACB109.1°109.5°
NCAH19110.4°109.5°
CANH20109.5°111.0°
CANH21109.5°111.0°
CACBCG112.5°109.5°
CACBH17108.7°109.5°
CACBH18108.7°109.5°
CBCAH19109.6°109.5°
CBCGCD110.8°109.5°
CBCGH15109.1°109.4°
CBCGH16109.1°109.5°
CGCBH17108.7°109.5°
CGCBH18108.7°109.5°
CGCDCE110.9°109.5°
CGCDH13109.1°109.5°
CGCDH14109.1°109.5°
CDCGH15109.1°109.4°
CDCGH16109.1°109.5°
CDCENZ110.9°109.5°
CDCEH11109.1°109.5°
CDCEH12109.1°109.5°
CECDH13109.1°109.4°
CECDH14109.1°109.5°
CENZCZ120.7°120.0°
CENZH10119.6°120.0°
NZCEH11109.1°109.4°
NZCEH12109.1°109.5°
CT2CTCT1110.1°109.4°
CT2CTO2108.4°109.5°
CT2CTCT3110.3°109.5°
CTCT2H4109.5°109.5°
CTCT2H5109.4°109.5°
CTCT2H6109.5°109.5°
CT1CTO2107.9°109.5°
CT1CTCT3109.5°109.5°
CTCT1H1109.5°109.5°
CTCT1H2109.5°109.5°
CTCT1H3109.5°109.4°
CZO2CT112.8°117.0°
O2CZNZ117.5°120.0°
O2CZO1119.2°120.0°
O2CTCT3110.6°109.5°
NZCZO1123.3°120.0°
CZNZH10119.7°120.0°
CTCT3H7109.5°109.5°
CTCT3H8109.5°109.5°
CTCT3H9109.4°109.5°
H1CT1H2109.5°109.5°
H1CT1H3109.5°109.5°
H2CT1H3109.4°109.4°
H4CT2H5109.5°109.4°
H4CT2H6109.5°109.4°
H5CT2H6109.4°109.5°
H7CT3H8109.4°109.5°
H7CT3H9109.5°109.4°
H8CT3H9109.5°109.5°
H11CEH12109.5°109.4°
H13CDH14109.4°109.5°
H15CGH16109.5°109.5°
H17CBH18109.4°109.5°
H20NH21109.5°111.0°
H24C5'H25109.5°109.4°
H34N6H35109.5°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N6C6N1C5175.1°179.6°
N6C6N1C2174.6°180.0°
N6C6C5N77.9°0.3°
N6C6C5C4174.6°180.0°
C6N6H34H35120.0°180.0°
C6N1C2N30.4°0.2°
N1C6C5N7177.0°179.9°
N1C6C5C40.6°0.4°
C6N1C2H33179.6°179.8°
N1C6N6H340.0°0.0°
N1C6N6H35120.0°180.0°
C2N1C6C50.6°0.4°
N1C2N3H33180.0°180.0°
N1C2N3C40.3°0.0°
C6C5N7C4177.8°179.7°
C6C5N7C8178.5°179.9°
C6C5C4N30.5°0.2°
C6C5C4N9179.0°179.8°
C5C6N6H34175.1°179.6°
C5C6N6H3555.1°0.4°
C2N3C4C50.3°0.0°
C2N3C4N9178.3°179.5°
N7C5C4N3177.7°180.0°
N7C5C4N90.8°0.4°
C5N7C8N90.5°0.1°
C5N7C8H32179.5°179.9°
C4C5N7C80.8°0.2°
C5C4N3N9178.0°179.5°
C5C4N9C80.5°0.4°
C5C4N9C1'176.5°179.9°
N7C8N9C40.0°0.3°
N7C8N9H32180.0°179.9°
N7C8N9C1'177.0°180.0°
N3C4N9C8177.7°180.0°
N3C4N9C1'5.3°0.3°
C4N3C2H33179.7°180.0°
C4N9C8C1'177.0°179.7°
C4N9C1'C2'97.0°84.7°
C4N9C1'O4'149.1°161.2°
C4N9C1'H3127.4°38.3°
C4N9C8H32180.0°179.8°
C8N9C1'C2'86.5°94.9°
C8N9C1'O4'27.4°19.2°
C8N9C1'H31149.0°142.0°
N9C1'C2'O4'112.9°118.5°
N9C1'C2'H31124.9°123.0°
N9C1'O4'H31121.3°123.0°
N9C1'C2'C3'86.8°155.5°
N9C1'C2'O2'157.4°86.3°
N9C1'O4'C4'122.4°158.5°
N9C1'C2'H2931.6°37.3°
C1'N9C8H323.0°0.1°
C2'C1'O4'H31121.3°118.5°
C1'C2'C3'O2'115.9°118.2°
C1'C2'C3'H29118.4°118.2°
C1'C2'O2'H29124.9°123.7°
C2'C1'O4'C4'4.9°39.9°
C1'C2'C3'C4'44.3°20.8°
C1'C2'C3'O3'157.4°97.8°
C1'C2'C3'H2774.1°139.6°
C1'C2'O2'H30180.0°174.2°
O4'C1'C2'C3'26.1°37.0°
O4'C1'C2'O2'89.7°155.2°
C1'O4'C4'C3'34.3°26.5°
C1'O4'C4'C5'153.6°145.9°
C1'O4'C4'H2683.5°93.1°
O4'C1'C2'H29144.5°81.3°
C3'C2'O2'H29124.8°123.6°
C2'C3'C4'O4'48.9°2.0°
C2'C3'C4'O3'113.5°118.7°
C2'C3'C4'H27118.4°118.9°
C2'C3'O3'H27127.7°122.7°
C2'C3'C4'C5'168.1°121.5°
C2'C3'C4'H2669.9°117.5°
C2'C3'O3'H28180.0°65.2°
C3'C2'O2'H3069.7°61.5°
C3'C2'C1'H31148.3°81.5°
O2'C2'C3'C4'71.6°139.1°
O2'C2'C3'O3'41.5°20.4°
O2'C2'C3'H27170.0°102.1°
O2'C2'C1'H3132.5°36.7°
O4'C4'C5'O5'61.9°66.7°
O4'C4'C3'C5'119.2°119.5°
O4'C4'C3'H26118.8°119.5°
O4'C4'C3'O3'162.4°120.7°
O4'C4'C5'H26123.8°121.0°
O4'C4'C5'H24178.1°53.3°
O4'C4'C5'H2558.1°173.3°
O4'C4'C3'H2769.5°116.9°
C4'O4'C1'H31116.3°78.6°
O1PPO2PO5'120.8°120.0°
O1PPO2PO3P117.7°120.0°
O1PPO5'O3P110.6°120.0°
O1PPO5'C5'140.7°55.0°
O1PPO3PC53.1°55.0°
O1PPO2PH230.0°180.0°
O2PPO5'O3P123.9°120.0°
O2PPO5'C5'93.8°65.0°
O2PPO3PC70.2°65.0°
PO5'C5'C4'177.0°180.0°
O5'PO3PC164.2°175.0°
O5'PO2PH23120.8°59.9°
PO5'C5'H2457.0°60.0°
PO5'C5'H2563.0°59.9°
O5'C5'C4'C3'52.3°175.3°
C5'O5'PO3P30.1°175.0°
O5'C5'C4'H24120.0°119.9°
O5'C5'C4'H25120.0°120.0°
O5'C5'H24H25120.0°120.0°
O5'C5'C4'H26174.4°54.3°
C4'C3'O3'H27127.2°122.6°
C3'C4'C5'H26122.1°121.0°
C3'C4'C5'H2467.7°64.7°
C3'C4'C5'H25172.3°55.3°
C4'C3'O3'H2874.9°179.9°
C4'C3'C2'H29162.7°97.4°
O3'C3'C4'C5'78.4°119.8°
O3'C3'C4'H2643.6°1.2°
O3'C3'C2'H2984.2°143.9°
PO3PCO6.8°0.0°
PO3PCCA176.9°180.0°
O3PPO2PH23117.8°60.0°
C4'C5'H24H25120.0°120.0°
C5'C4'C3'H2749.7°2.6°
OCO3PCA176.3°180.0°
OCCAN25.4°20.0°
OCCACB144.4°100.0°
OCCAH1995.1°140.0°
O3PCCAN158.3°160.0°
O3PCCACB39.2°80.0°
O3PCCAH1981.3°40.0°
CCANCB119.6°120.0°
CCANH19120.0°120.0°
CCACBH19120.5°120.0°
CCACBCG93.6°175.0°
CCACBH1726.8°55.0°
CCACBH18145.9°65.0°
CCANH20180.0°60.0°
CCANH2160.0°176.0°
NCACBH19121.0°120.0°
NCACBCG24.9°65.0°
NCACBH17145.4°175.0°
NCACBH1895.6°55.0°
CANH20H21120.0°123.9°
CACBCGH17120.5°120.0°
CACBCGH18120.5°120.0°
CACBCGCD176.7°180.0°
CACBCGH1563.1°60.0°
CACBCGH1656.6°60.0°
CACBH17H18118.6°120.0°
CBCANH2060.4°60.0°
CBCANH21179.5°64.0°
CBCGCDH15120.2°119.9°
CBCGCDH16120.2°120.1°
CBCGCDCE167.1°180.0°
CBCGCDH1372.7°60.1°
CBCGCDH1446.9°60.0°
CBCGH15H16119.4°120.1°
CGCBH17H18118.6°120.0°
CGCBCAH19145.9°55.0°
CGCDCEH13120.2°119.9°
CGCDCEH14120.2°120.0°
CGCDCENZ180.0°180.0°
CGCDCEH1159.8°60.0°
CGCDCEH1259.7°60.0°
CGCDH13H14119.4°120.0°
CDCGH15H16119.4°120.0°
CDCGCBH1756.3°60.0°
CDCGCBH1862.8°60.0°
CDCENZH11120.2°120.0°
CDCENZH12120.2°120.1°
CDCENZCZ171.2°180.0°
CDCENZH108.8°0.1°
CDCEH11H12119.4°120.1°
CECDH13H14119.4°120.0°
CECDCGH1546.9°60.1°
CECDCGH1672.7°59.9°
CENZCZO20.1°180.0°
CENZCZH10180.0°179.9°
CENZCZO1178.8°0.1°
NZCEH11H12119.3°119.9°
NZCECDH1359.7°60.1°
NZCECDH1459.8°60.0°
CT2CTCT1O2118.1°120.0°
CT2CTCT1CT3121.5°120.0°
CT2CTO2CZ61.9°59.9°
CT2CTO2CT3121.1°120.0°
CT2CTCT1H1180.0°60.0°
CT2CTCT1H260.0°60.0°
CT2CTCT1H360.0°180.0°
CTCT2H4H5120.0°120.0°
CTCT2H4H6120.0°120.0°
CTCT2H5H6120.0°120.1°
CT2CTCT3H7180.0°180.0°
CT2CTCT3H860.0°60.0°
CT2CTCT3H960.0°60.0°
CT1CTO2CZ178.9°60.0°
CT1CTO2CT3119.7°120.0°
CTCT1H1H2120.0°120.0°
CTCT1H1H3120.0°120.0°
CTCT1H2H3120.0°119.9°
CT1CTCT2H4180.0°60.0°
CT1CTCT2H560.0°180.0°
CT1CTCT2H660.0°60.0°
CT1CTCT3H758.6°60.0°
CT1CTCT3H861.3°180.0°
CT1CTCT3H9178.7°60.0°
O2CZNZO1178.7°179.9°
CZO2CTCT359.2°180.0°
O2CZNZH10180.0°0.1°
CTO2CZNZ176.6°180.0°
CTO2CZO14.7°0.1°
O2CTCT1H161.9°180.0°
O2CTCT1H258.2°59.9°
O2CTCT1H3178.1°60.0°
O2CTCT2H462.2°180.0°
O2CTCT2H5177.8°60.1°
O2CTCT2H657.8°60.0°
O2CTCT3H760.1°60.0°
O2CTCT3H8179.9°60.0°
O2CTCT3H960.0°180.0°
CZNZCEH1168.6°60.0°
CZNZCEH1250.9°59.9°
O1CZNZH101.2°180.0°
CT3CTCT1H158.5°60.0°
CT3CTCT1H2178.6°180.0°
CT3CTCT1H361.5°60.0°
CT3CTCT2H459.0°60.0°
CT3CTCT2H561.0°60.0°
CT3CTCT2H6179.0°180.0°
CTCT3H7H8120.0°120.1°
CTCT3H7H9120.0°120.0°
CTCT3H8H9120.0°120.0°
H1CT1H2H3120.0°120.0°
H4CT2H5H6120.0°119.9°
H7CT3H8H9120.0°119.9°
H10NZCEH11111.4°120.1°
H10NZCEH12129.1°120.0°
H11CECDH13179.9°180.0°
H11CECDH1460.4°60.0°
H12CECDH1360.5°60.0°
H12CECDH14180.0°180.0°
H13CDCGH15167.1°180.0°
H13CDCGH1647.5°60.0°
H14CDCGH1573.3°60.0°
H14CDCGH16167.1°180.0°
H15CGCBH17176.5°180.0°
H15CGCBH1857.4°59.9°
H16CGCBH1763.9°60.0°
H16CGCBH18177.0°180.0°
H17CBCAH1993.7°65.0°
H18CBCAH1925.4°175.0°
H19CANH2060.0°180.0°
H19CANH2160.0°56.0°
H24C5'C4'H2654.3°174.3°
H25C5'C4'H2665.6°65.7°
H26C4'C3'H27171.7°123.6°
H27C3'O3'H2852.3°57.5°
H27C3'C2'H2944.3°21.4°
H29C2'O2'H3055.1°62.2°
H29C2'C1'H3193.3°160.3°

248636

PDB entries from 2026-02-04

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