Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

BJH

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C2C1sing1.53Å1.54Å
C2C5sing1.51Å1.54Å
C2H21sing1.09Å1.12Å
C2H22sing1.09Å1.11Å
C1N1sing1.47Å1.46Å
C1Bsing1.57Å1.61Å
C1H1sing1.09Å1.11Å
N1C3sing1.35Å1.34Å
N1HN1sing0.97Å1.02Å
C3C4sing1.51Å1.55Å
C3O2doub1.21Å1.24Å
C4H41sing1.09Å1.11Å
C4H42sing1.09Å1.12Å
C4H43sing1.09Å1.12Å
C11O3sing1.35Å1.25Å
C11O4doub1.22Å1.26Å
C11C9sing1.47Å1.54Å
O3HO3sing0.97Å0.95Å
BOB1sing1.42Å1.52Å
BOB2sing1.42Å1.46Å
OB1HOB1sing0.97Å0.95Å
C6C5doub1.38Å1.54ÅAromatic
C6C7sing1.39Å1.55ÅAromatic
C6H6sing1.08Å1.10Å
C5C10sing1.39Å1.53ÅAromatic
C7C8doub1.38Å1.56ÅAromatic
C7H7sing1.08Å1.10Å
C10C9doub1.40Å1.52ÅAromatic
C10O5sing1.36Å1.25Å
C8C9sing1.40Å1.54ÅAromatic
C8H8sing1.08Å1.10Å
OB2HOB2sing0.97Å0.95Å
O5HO5sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C1C2C5111.1°109.4°
C1C2H21111.6°109.5°
C1C2H22111.6°109.5°
C2C1N1110.2°109.5°
C2C1B111.9°109.5°
C2C1H1107.7°109.5°
C5C2H21111.6°109.5°
C5C2H22111.6°109.5°
C2C5C6108.4°120.0°
C2C5C10133.0°120.0°
H21C2H2298.8°109.5°
N1C1B110.6°109.5°
N1C1H1109.1°109.4°
C1N1C3117.7°120.1°
C1N1HN1125.3°120.0°
BC1H1107.3°109.5°
C1BOB1112.8°120.0°
C1BOB297.5°120.0°
C3N1HN1117.0°120.0°
N1C3C4117.3°120.1°
N1C3O2122.1°120.0°
C4C3O2120.6°120.0°
C3C4H41117.3°109.5°
C3C4H42109.4°109.4°
C3C4H43109.4°109.5°
H41C4H42109.4°109.4°
H41C4H43109.4°109.5°
H42C4H43100.7°109.5°
O3C11O4122.0°120.0°
O3C11C9116.7°120.0°
C11O3HO3122.0°120.0°
O4C11C9118.6°120.0°
C11C9C10112.1°120.2°
C11C9C8127.9°120.2°
OB1BOB2112.7°120.0°
BOB1HOB1112.8°106.8°
BOB2HOB297.5°106.9°
C5C6C7120.2°120.4°
C5C6H6119.5°119.8°
C6C5C10118.5°120.1°
C7C6H6120.4°119.8°
C6C7C8120.0°120.3°
C6C7H7119.8°119.8°
C5C10C9122.3°119.7°
C5C10O5115.7°120.1°
C8C7H7120.2°119.9°
C7C8C9118.9°119.9°
C7C8H8121.3°120.1°
C9C10O5121.9°120.2°
C10C9C8120.0°119.6°
C10O5HO5115.7°106.8°
C9C8H8119.8°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C1C2C5H21125.2°120.0°
C1C2C5H22125.3°120.0°
C1C2H21H22117.5°120.1°
C2C1N1B124.2°120.0°
C2C1N1H1118.0°119.9°
C2C1BH1117.9°120.0°
C2C1N1C377.8°150.0°
C2C1N1HN1102.2°30.1°
C2C1BOB1107.4°60.0°
C2C1BOB2134.0°120.0°
C1C2C5C6124.9°90.0°
C1C2C5C1058.2°90.3°
C5C2H21H22117.5°120.0°
C5C2C1N153.1°179.9°
C5C2C1B70.3°60.0°
C5C2C1H1172.0°60.0°
C2C5C6C10177.4°179.7°
C2C5C6C7178.3°179.9°
C2C5C6H61.7°0.0°
C2C5C10C9178.1°179.8°
C2C5C10O53.9°0.3°
H21C2C1N1178.4°60.0°
H21C2C1B54.9°180.0°
H21C2C1H162.7°59.9°
H21C2C5C6109.9°29.9°
H21C2C5C1067.0°149.8°
H22C2C1N172.1°60.1°
H22C2C1B164.4°60.0°
H22C2C1H146.8°180.0°
H22C2C5C60.4°150.0°
H22C2C5C10176.5°29.7°
N1C1BH1118.9°119.9°
C1N1C3HN1180.0°179.8°
C1N1C3C4177.1°180.0°
C1N1C3O23.9°0.1°
N1C1BOB115.8°60.0°
N1C1BOB2102.7°119.9°
BC1N1C3157.9°89.9°
BC1N1HN122.1°89.9°
C1BOB1OB2109.2°179.9°
C1BOB1HOB1180.0°180.0°
C1BOB2HOB2180.0°0.1°
H1C1N1C340.2°30.1°
H1C1N1HN1139.8°150.0°
H1C1BOB1134.7°180.0°
H1C1BOB216.1°0.0°
N1C3C4O2179.1°179.9°
N1C3C4H41180.0°180.0°
N1C3C4H4254.7°60.1°
N1C3C4H4354.7°59.9°
HN1N1C3C43.0°0.1°
HN1N1C3O2176.1°180.0°
C3C4H41H42125.3°120.0°
C3C4H41H43125.3°120.1°
C3C4H42H43115.1°120.0°
O2C3C4H410.9°0.1°
O2C3C4H42126.2°120.0°
O2C3C4H43124.4°120.0°
H41C4H42H43115.2°120.0°
O3C11O4C9160.6°179.9°
O3C11C9C1049.1°179.7°
O3C11C9C8129.1°0.1°
O4C11O3HO3180.0°0.1°
O4C11C9C10149.3°0.4°
O4C11C9C832.6°180.0°
C9C11O3HO319.0°180.0°
C11C9C10C5179.9°179.8°
C11C9C8C7179.7°179.9°
C11C9C10C8178.3°179.6°
C11C9C10O52.0°0.3°
C11C9C8H80.3°0.2°
OB1BOB2HOB261.4°180.0°
OB2BOB1HOB170.8°0.1°
C5C6C7H6180.0°179.9°
C5C6C7C80.8°0.1°
C5C6C7H7179.2°180.0°
C6C5C10C91.4°0.5°
C6C5C10O5179.4°180.0°
C7C6C5C100.9°0.2°
C6C7C8H7180.0°179.9°
C6C7C8C91.2°0.0°
C6C7C8H8178.8°179.9°
H6C6C5C10179.1°179.7°
H6C6C7C8179.2°180.0°
H6C6C7H70.9°0.1°
C5C10C9O5177.9°179.5°
C5C10C9C81.8°0.6°
C5C10O5HO5180.0°90.5°
C7C8C9C101.7°0.3°
C7C8C9H8180.0°179.9°
H7C7C8C9178.8°180.0°
H7C7C8H81.2°0.0°
C10C9C8H8178.3°179.8°
C9C10O5HO52.0°90.0°
O5C10C9C8179.7°179.9°

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon