Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

BJD

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O5C6sing1.43Å1.44Å
O5C4sing1.43Å1.46Å
C6C1sing1.53Å1.52Å
C4C3sing1.53Å1.53Å
C1N2sing1.47Å1.51Å
C3N2sing1.47Å1.50Å
N2C13sing1.47Å1.55Å
C13C15sing1.53Å1.52Å
C15C17sing1.53Å1.54Å
C17N19sing1.47Å1.46Å
CL9C70sing1.74Å1.73Å
N19N21sing1.40Å1.37ÅAromatic
N19C24sing1.35Å1.36ÅAromatic
C81C69sing1.51Å1.52Å
C81N83sing1.47Å1.48Å
C70C69doub1.39Å1.40ÅAromatic
C70C71sing1.38Å1.39ÅAromatic
N21C22doub1.32Å1.34ÅAromatic
C30C24sing1.51Å1.50Å
C30C31sing1.53Å1.56Å
C69C68sing1.38Å1.40ÅAromatic
C24C23doub1.36Å1.35ÅAromatic
C71C72doub1.38Å1.38ÅAromatic
C68C66doub1.40Å1.40ÅAromatic
C72C66sing1.40Å1.40ÅAromatic
C66C64sing1.43Å1.43Å
C31N32sing1.47Å1.50Å
C22C23sing1.40Å1.42ÅAromatic
C22C47sing1.48Å1.48Å
C64C62trip1.17Å1.19Å
C23C33sing1.51Å1.50Å
C49C47doub1.39Å1.39ÅAromatic
C49C50sing1.40Å1.38ÅAromatic
C62C50sing1.43Å1.43Å
C47C53sing1.39Å1.40ÅAromatic
C50C51doub1.40Å1.40ÅAromatic
C33N32sing1.47Å1.49Å
N83C85sing1.47Å1.49Å
C53C52doub1.38Å1.40ÅAromatic
C51C52sing1.38Å1.39ÅAromatic
C51CL6sing1.74Å1.76Å
N32S39sing1.66Å1.63Å
C41S39sing1.81Å1.76Å
C85C87sing1.51Å1.53Å
S39O43doub1.42Å1.43Å
S39O45doub1.42Å1.43Å
C87C93doub1.38Å1.39ÅAromatic
C87C89sing1.38Å1.39ÅAromatic
C93C92sing1.38Å1.40ÅAromatic
C89C90doub1.38Å1.40ÅAromatic
C92C91doub1.38Å1.38ÅAromatic
C90C91sing1.38Å1.39ÅAromatic
C81H1sing1.09Å1.10Å
C81H2sing1.09Å1.10Å
N83H3sing1.01Å1.00Å
C85H5sing1.09Å1.10Å
C85H6sing1.09Å1.10Å
C93H7sing1.08Å1.08Å
C92H8sing1.08Å1.08Å
C91H9sing1.08Å1.08Å
C90H10sing1.08Å1.08Å
C89H11sing1.08Å1.08Å
C68H12sing1.08Å1.08Å
C71H13sing1.08Å1.08Å
C72H14sing1.08Å1.08Å
C49H15sing1.08Å1.08Å
C52H16sing1.08Å1.08Å
C53H17sing1.08Å1.08Å
C33H18sing1.09Å1.10Å
C33H19sing1.09Å1.10Å
C41H20sing1.09Å1.10Å
C41H21sing1.09Å1.10Å
C41H22sing1.09Å1.10Å
C31H23sing1.09Å1.10Å
C31H24sing1.09Å1.10Å
C30H25sing1.09Å1.10Å
C30H26sing1.09Å1.10Å
C17H27sing1.09Å1.10Å
C17H28sing1.09Å1.10Å
C15H29sing1.09Å1.10Å
C15H30sing1.09Å1.10Å
C13H31sing1.09Å1.10Å
C13H32sing1.09Å1.10Å
C3H34sing1.09Å1.10Å
C3H35sing1.09Å1.10Å
C4H36sing1.09Å1.10Å
C4H37sing1.09Å1.10Å
C6H38sing1.09Å1.10Å
C6H39sing1.09Å1.10Å
C1H40sing1.09Å1.10Å
C1H41sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C6O5C4111.3°113.7°
O5C6C1112.4°109.2°
O5C6H38108.7°109.5°
O5C6H39108.7°109.5°
O5C4C3111.9°109.2°
O5C4H36108.8°109.5°
O5C4H37108.8°109.5°
C6C1N2110.9°109.3°
C1C6H38108.7°109.5°
C1C6H39108.7°109.5°
C6C1H40109.1°109.5°
C6C1H41109.1°109.5°
C4C3N2110.3°109.3°
C4C3H34109.3°109.5°
C4C3H35109.3°109.5°
C3C4H36108.8°109.5°
C3C4H37108.9°109.5°
C1N2C3110.2°110.7°
C1N2C13110.3°111.0°
N2C1H40109.1°109.5°
N2C1H41109.1°109.6°
C3N2C13114.0°111.0°
N2C3H34109.2°109.5°
N2C3H35109.2°109.5°
N2C13C15117.4°109.4°
N2C13H31107.5°109.5°
N2C13H32107.5°109.5°
C13C15C17115.3°109.5°
C13C15H29108.0°109.4°
C13C15H30108.0°109.5°
C15C13H31107.4°109.5°
C15C13H32107.5°109.4°
C15C17N19111.8°109.4°
C15C17H27108.9°109.4°
C15C17H28108.9°109.5°
C17C15H29108.0°109.4°
C17C15H30108.0°109.5°
C17N19N21118.2°125.9°
C17N19C24129.8°125.9°
N19C17H27108.9°109.4°
N19C17H28108.9°109.5°
CL9C70C69119.9°119.8°
CL9C70C71118.0°119.9°
N21N19C24112.0°108.1°
N19N21C22104.1°108.2°
N19C24C30127.9°127.7°
N19C24C23107.3°107.8°
C69C81N83111.2°109.5°
C81C69C70121.8°119.9°
C81C69C68120.8°120.0°
C69C81H1109.1°109.5°
C69C81H2109.0°109.5°
C81N83C85112.7°111.0°
N83C81H1109.0°109.5°
N83C81H2109.0°109.5°
C81N83H3108.6°111.0°
C69C70C71122.1°120.3°
C70C69C68117.4°120.1°
C70C71C72119.6°120.2°
C70C71H13120.2°119.9°
N21C22C23111.2°107.7°
N21C22C47119.5°126.2°
C24C30C31111.9°108.8°
C30C24C23124.7°124.5°
C24C30H25108.9°109.6°
C24C30H26108.8°109.5°
C30C31N32110.7°109.2°
C30C31H23109.2°109.5°
C30C31H24109.1°109.6°
C31C30H25108.9°109.6°
C31C30H26108.9°109.6°
C69C68C66121.1°119.9°
C69C68H12119.4°120.0°
C24C23C22105.4°108.1°
C24C23C33122.2°123.9°
C71C72C66119.6°119.8°
C72C71H13120.2°119.9°
C71C72H14120.2°120.1°
C68C66C72120.1°119.7°
C68C66C64119.2°120.1°
C66C68H12119.5°120.1°
C72C66C64120.6°120.1°
C66C72H14120.2°120.1°
C66C64C62176.9°180.0°
C31N32C33113.5°118.3°
C31N32S39117.3°120.9°
N32C31H23109.2°109.5°
N32C31H24109.1°109.5°
C23C22C47129.3°126.1°
C22C23C33132.4°128.0°
C22C47C49117.6°120.0°
C22C47C53123.0°120.0°
C64C62C50172.2°180.0°
C23C33N32107.7°107.3°
C23C33H18109.9°109.9°
C23C33H19109.9°109.9°
C47C49C50121.2°119.7°
C49C47C53119.4°120.0°
C47C49H15119.4°120.1°
C49C50C62117.9°120.1°
C49C50C51119.1°119.7°
C50C49H15119.4°120.1°
C62C50C51123.1°120.1°
C47C53C52120.2°120.2°
C47C53H17119.9°119.9°
C50C51C52120.7°120.1°
C50C51CL6119.9°119.9°
C33N32S39121.6°120.9°
N32C33H18109.9°109.9°
N32C33H19109.9°109.9°
N83C85C87112.3°109.5°
C85N83H3108.7°111.0°
N83C85H5108.8°109.5°
N83C85H6108.7°109.5°
C53C52C51119.5°120.3°
C53C52H16120.2°119.9°
C52C53H17119.9°119.9°
C52C51CL6119.4°120.0°
C51C52H16120.3°119.8°
N32S39C41107.3°104.5°
N32S39O43107.4°104.3°
N32S39O45106.4°104.3°
C41S39O43108.2°110.5°
C41S39O45108.7°110.6°
S39C41H20109.5°109.5°
S39C41H21109.4°109.5°
S39C41H22109.5°109.5°
C85C87C93120.7°120.0°
C85C87C89121.0°120.0°
C87C85H5108.8°109.5°
C87C85H6108.8°109.5°
O43S39O45118.4°121.0°
C93C87C89118.4°120.0°
C87C93C92120.9°120.0°
C87C93H7119.5°120.0°
C87C89C90120.8°120.0°
C87C89H11119.6°120.0°
C93C92C91120.2°120.0°
C92C93H7119.5°120.0°
C93C92H8119.9°120.0°
C89C90C91120.3°120.0°
C89C90H10119.8°120.0°
C90C89H11119.6°120.0°
C92C91C90119.4°120.0°
C91C92H8119.9°120.0°
C92C91H9120.3°120.0°
C90C91H9120.4°120.0°
C91C90H10119.9°120.0°
H1C81H2109.5°109.4°
H5C85H6109.4°109.4°
H18C33H19109.5°109.9°
H20C41H21109.5°109.5°
H20C41H22109.5°109.4°
H21C41H22109.4°109.5°
H23C31H24109.5°109.5°
H25C30H26109.4°109.7°
H27C17H28109.5°109.5°
H29C15H30109.5°109.5°
H31C13H32109.5°109.5°
H34C3H35109.5°109.5°
H36C4H37109.5°109.5°
H38C6H39109.5°109.6°
H40C1H41109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O5C6C1H38120.4°119.9°
O5C6C1H39120.4°119.9°
C6O5C4C364.7°58.7°
O5C6C1N218.6°56.9°
C6O5C4H36175.0°178.6°
C6O5C4H3755.7°61.2°
O5C6H38H39118.7°120.1°
O5C6C1H40101.7°176.8°
O5C6C1H41138.8°63.1°
C4O5C6C143.0°58.7°
O5C4C3H36120.4°119.9°
O5C4C3H37120.4°119.9°
O5C4C3N219.4°56.9°
O5C4C3H34100.7°63.1°
O5C4C3H35139.5°176.8°
O5C4H36H37118.9°120.1°
C4O5C6H3877.4°178.6°
C4O5C6H39163.4°61.2°
C6C1N2H40120.2°119.9°
C6C1N2H41120.2°120.0°
C6C1N2C362.2°58.7°
C6C1N2C13171.0°177.6°
C1C6H38H39118.7°120.1°
C6C1H40H41119.3°120.1°
C4C3N2C140.9°58.7°
C4C3N2H34120.1°120.0°
C4C3N2H35120.1°120.0°
C4C3N2C13165.6°177.6°
C4C3H34H35119.6°120.1°
C3C4H36H37118.9°120.1°
C1N2C3C13124.7°123.7°
C1N2C13C15120.7°66.4°
C1N2C13H310.4°53.6°
C1N2C13H32118.1°173.6°
C1N2C3H34161.0°61.3°
C1N2C3H3579.2°178.6°
N2C1C6H38139.0°176.8°
N2C1C6H39101.9°63.0°
N2C1H40H41119.3°120.1°
C3N2C13C153.9°170.0°
C3N2C13H31125.0°70.0°
C3N2C13H32117.2°50.0°
N2C3H34H35119.6°120.1°
N2C3C4H36139.8°176.8°
N2C3C4H37100.9°63.1°
C3N2C1H4058.0°178.6°
C3N2C1H41177.6°61.3°
N2C13C15H31121.1°120.1°
N2C13C15H32121.2°120.0°
N2C13C15C17152.7°179.9°
N2C13C15H2931.9°60.0°
N2C13C15H3086.4°60.0°
N2C13H31H32116.4°120.0°
C13N2C3H3474.3°62.4°
C13N2C3H3545.4°57.7°
C13N2C1H4068.7°57.7°
C13N2C1H4150.8°62.4°
C13C15C17H29120.9°119.9°
C13C15C17H30120.9°120.0°
C13C15C17N1968.7°180.0°
C13C15C17H27170.9°60.1°
C13C15C17H2851.6°60.0°
C13C15H29H30117.3°120.0°
C15C13H31H32116.4°120.0°
C15C17N19H27120.3°119.9°
C15C17N19H28120.3°120.0°
C15C17N19N2189.7°90.1°
C15C17N19C2488.1°90.3°
C15C17H27H28118.9°120.0°
C17C15H29H30117.3°120.0°
C17C15C13H3186.1°60.0°
C17C15C13H3231.6°60.0°
C17N19N21C24178.2°179.7°
C17N19N21C22179.3°179.9°
C17N19C24C302.8°0.1°
C17N19C24C23178.6°179.6°
N19C17H27H28118.9°120.0°
N19C17C15H2952.1°60.1°
N19C17C15H30170.4°60.0°
CL9C70C69C811.7°0.0°
CL9C70C69C71179.3°179.8°
CL9C70C69C68179.8°179.9°
CL9C70C71C72179.8°180.0°
CL9C70C71H130.2°0.0°
N21N19C24C30179.3°179.8°
N21N19C24C230.7°0.7°
N19N21C22C231.1°0.0°
N19N21C22C47179.7°179.7°
N21N19C17H27150.0°150.0°
N21N19C17H2830.7°29.9°
C24N19N21C221.1°0.4°
N19C24C30C23178.3°179.4°
N19C24C30C31179.2°161.5°
N19C24C23C220.0°0.7°
N19C24C23C33179.6°179.1°
N19C24C30H2558.8°41.6°
N19C24C30H2660.4°78.7°
C24N19C17H2732.2°29.6°
C24N19C17H28151.5°149.7°
C69C81N83H1120.2°120.0°
C69C81N83H2120.3°120.0°
C81C69C70C68178.5°179.9°
C81C69C70C71179.0°179.8°
C81C69C68C66178.5°180.0°
C69C81N83C85100.9°180.0°
C69C81H1H2119.2°120.0°
C69C81N83H319.6°56.1°
C81C69C68H121.5°0.1°
N83C81C69C70107.4°75.0°
N83C81C69C6871.0°105.1°
C81N83C85H3120.5°123.9°
C81N83C85C87174.5°180.0°
N83C81H1H2119.2°120.0°
C81N83C85H565.1°60.0°
C81N83C85H654.0°60.0°
C69C70C71C720.5°0.2°
C70C69C68C660.1°0.1°
C70C69C81H1132.3°45.0°
C70C69C81H212.8°165.0°
C70C69C68H12179.9°180.0°
C69C70C71H13179.5°179.8°
C71C70C69C680.5°0.1°
C70C71C72H13180.0°180.0°
C70C71C72C660.1°0.0°
C70C71C72H14179.9°179.9°
N21C22C23C240.7°0.4°
N21C22C23C47178.4°179.7°
N21C22C23C33179.8°179.4°
N21C22C47C49146.3°34.6°
N21C22C47C5333.7°145.3°
C24C30C31H25120.4°119.8°
C24C30C31H26120.3°119.7°
C24C30C31N3230.5°45.4°
C30C24C23C22178.6°179.8°
C30C24C23C331.0°0.4°
C24C30C31H2389.7°74.5°
C24C30C31H24150.7°165.3°
C24C30H25H26118.9°120.3°
C31C30C24C232.5°17.9°
C30C31N32H23120.2°119.9°
C30C31N32H24120.2°120.0°
C30C31N32C3361.0°64.5°
C30C31N32S39148.8°115.5°
C30C31H23H24119.4°120.2°
C31C30H25H26118.9°120.4°
C69C68C66H12180.0°179.9°
C69C68C66C720.6°0.3°
C69C68C66C64179.6°179.9°
C68C69C81H149.2°134.9°
C68C69C81H2168.7°15.0°
C24C23C22C33179.6°179.8°
C24C23C22C47179.1°179.9°
C24C23C33N3227.2°11.2°
C24C23C33H18146.9°108.2°
C24C23C33H1992.5°130.6°
C23C24C30H25122.8°137.8°
C23C24C30H26117.9°101.9°
C71C72C66C680.7°0.3°
C71C72C66H14180.0°180.0°
C71C72C66C64179.6°180.0°
C68C66C72C64179.0°179.7°
C68C66C64C62113.3°51.6°
C68C66C72H14179.3°179.7°
C72C66C64C6267.7°128.1°
C72C66C68H12179.4°179.8°
C66C72C71H13179.9°180.0°
C66C64C62C5068.5°NaN°
C64C66C68H120.4°0.1°
C64C66C72H140.4°0.0°
C31N32C33C2357.5°44.2°
C31N32C33S39148.8°179.9°
C31N32S39C4175.8°90.0°
C31N32S39O4340.3°26.1°
C31N32S39O45168.0°153.9°
C31N32C33H18177.2°75.3°
C31N32C33H1962.2°163.7°
N32C31H23H24119.4°120.1°
N32C31C30H25150.9°165.3°
N32C31C30H2689.8°74.3°
C23C22C47C4932.0°145.0°
C23C22C47C53148.0°35.1°
C22C23C33N32152.3°169.0°
C22C23C33H1832.6°71.6°
C22C23C33H1988.0°49.6°
C47C22C23C331.3°0.3°
C22C47C49C53180.0°179.9°
C22C47C49C50179.9°179.9°
C22C47C53C52179.9°179.8°
C22C47C49H150.0°0.0°
C22C47C53H170.1°0.1°
C64C62C50C4918.7°128.6°
C64C62C50C51161.6°51.7°
C23C33N32H18119.7°119.5°
C23C33N32H19119.7°119.5°
C23C33N32S39153.8°135.7°
C23C33H18H19120.8°121.1°
C47C49C50H15180.0°180.0°
C47C49C50C62179.4°180.0°
C47C49C50C510.2°0.2°
C49C47C53C520.2°0.3°
C49C47C53H17179.8°179.9°
C49C50C62C51179.7°179.7°
C50C49C47C530.0°0.0°
C49C50C51C520.3°0.2°
C49C50C51CL6179.8°179.8°
C62C50C51C52179.4°180.0°
C62C50C51CL60.1°0.0°
C62C50C49H150.5°0.1°
C47C53C52H17180.0°179.7°
C47C53C52C510.1°0.3°
C53C47C49H15180.0°180.0°
C47C53C52H16179.9°179.7°
C50C51C52C530.1°0.0°
C50C51C52CL6179.5°180.0°
C51C50C49H15179.8°179.8°
C50C51C52H16179.9°180.0°
C33N32S39C4171.8°90.0°
C33N32S39O43172.1°154.0°
C33N32S39O4544.4°26.1°
N32C33H18H19120.8°121.0°
C33N32C31H2359.2°55.5°
C33N32C31H24178.8°175.6°
N83C85C87H5120.4°120.0°
N83C85C87H6120.4°120.0°
N83C85C87C9372.2°90.0°
N83C85C87C89107.3°90.3°
C85N83C81H1138.9°60.0°
C85N83C81H219.4°60.0°
N83C85H5H6118.7°120.0°
C53C52C51H16180.0°180.0°
C53C52C51CL6179.6°180.0°
C51C52C53H17179.9°179.9°
CL6C51C52H160.4°0.0°
N32S39C41O43115.6°111.6°
N32S39C41O45114.7°111.6°
N32S39O43O45120.4°116.7°
S39N32C33H1834.1°104.8°
S39N32C33H1986.5°16.2°
N32S39C41H20180.0°59.9°
N32S39C41H2160.0°180.0°
N32S39C41H2260.0°60.0°
S39N32C31H2390.9°124.6°
S39N32C31H2428.7°4.5°
C41S39O43O45124.1°131.5°
S39C41H20H21120.0°120.1°
S39C41H20H22120.0°120.0°
S39C41H21H22120.0°120.0°
C85C87C93C89179.5°179.7°
C85C87C93C92179.5°180.0°
C85C87C89C90179.4°179.8°
C87C85N83H354.0°56.1°
C87C85H5H6118.7°120.0°
C85C87C93H70.5°0.0°
C85C87C89H110.6°0.0°
O43S39C41H2064.4°51.7°
O43S39C41H21175.5°68.4°
O43S39C41H2255.6°171.6°
O45S39C41H2065.3°171.6°
O45S39C41H2154.7°68.3°
O45S39C41H22174.7°51.6°
C87C93C92H7180.0°180.0°
C93C87C89C900.1°0.5°
C87C93C92C910.1°0.0°
C93C87C85H548.3°30.0°
C93C87C85H6167.4°150.0°
C87C93C92H8179.9°179.9°
C93C87C89H11179.9°179.7°
C89C87C93C920.0°0.3°
C87C89C90H11180.0°179.8°
C87C89C90C910.0°0.4°
C89C87C85H5132.3°149.7°
C89C87C85H613.1°29.8°
C89C87C93H7180.0°179.7°
C87C89C90H10180.0°179.7°
C93C92C91H8180.0°179.9°
C93C92C91C900.2°0.0°
C93C92C91H9179.8°179.9°
C89C90C91C920.1°0.2°
C89C90C91H10180.0°179.9°
C89C90C91H9179.9°179.8°
C92C91C90H9180.0°180.0°
C91C92C93H7179.9°180.0°
C92C91C90H10179.9°179.9°
C90C91C92H8179.8°180.0°
C91C90C89H11180.0°179.7°
H1C81N83H3100.6°176.1°
H2C81N83H3139.9°64.0°
H3N83C85H5174.4°176.1°
H3N83C85H666.4°64.0°
H7C93C92H80.1°0.1°
H8C92C91H90.1°0.0°
H9C91C90H100.1°0.0°
H10C90C89H110.0°0.1°
H13C71C72H140.1°0.0°
H16C52C53H170.1°0.1°
H20C41H21H22120.0°120.0°
H23C31C30H2530.7°45.3°
H23C31C30H26150.0°165.7°
H24C31C30H2588.9°74.8°
H24C31C30H2630.4°45.6°
H27C17C15H2968.2°180.0°
H27C17C15H3050.0°59.9°
H28C17C15H29172.4°59.9°
H28C17C15H3069.3°180.0°
H29C15C13H31153.0°179.9°
H29C15C13H3289.3°60.0°
H30C15C13H3134.7°60.0°
H30C15C13H32152.4°180.0°
H34C3C4H3619.7°56.8°
H34C3C4H37138.9°177.0°
H35C3C4H36100.1°63.3°
H35C3C4H3719.2°56.9°
H38C6C1H4018.7°63.3°
H38C6C1H41100.8°56.8°
H39C6C1H40137.9°56.9°
H39C6C1H4118.4°177.0°

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon